deaD - ATP-dependent RNA helicase for 23S ribosomal RNA maturation-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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937492 deaD

基因描述

Type	Description
Definition	ATP-dependent RNA helicase for 23S ribosomal RNA maturation

研究结论

Date	Results	Publications
2010-11-06 10:16:00	present a model for the global conformation of YxiN in which the RBD lies above a slightly concave patch that is formed by flexible loops on the surface of the C-terminal RecA domain	20691700
2010-01-21 00:00:00	results show that the interdomain cleft in the helicase core closes upon ATP binding at the beginning of the cycle. Reopening occurs after ATP hydrolysis, most likely coupled to phosphate release	19839642
2010-01-21 00:00:00	The domain of the Bacillus subtilis DEAD-box helicase YxiN that is responsible for specific binding of 23S rRNA has an RNA recognition motif fold	16611943
2010-01-21 00:00:00	FRET experiments with Bacillus subtilis DEAD box helicase YxiN carrying donor and acceptor fluorophores on different sides of the interdomain cleft reveal an open helicase conformation in the absence of nucleotides, or ADP, or RNA	18184816
2010-01-21 00:00:00	YxiN has a DEx(D/H) core and a specific RNA-binding domain	16118224

名称对应

Type	IDs
Synonymous	BSU39110
Gene	UniProtKB-ID: DBPA_BACSU, A0A6M4JQQ3_BACSU UniprotKB: P42305, A0A6M4JQQ3 UniParc: UPI000195C714 EMBL: D83026, CP052842, AL009126, CP053102 EnsemblGenome: BSU39110 KO: bsu:BSU39110
Nucleutide sequences	EMBL-CDS: CAB15947.2, BAA11693.1, QJP90581.1, QJR48471.1 Gene_ORFName: SS8E, HIR77_21720, HIR78_22315 EnsemblGenome_TRS: CAB15947
Protein sequencees	EnsemblGenome_PRO: CAB15947 RefSeq: NP_391790.2
Others	UniRef100: UniRef100_P42305 UniRef90: UniRef90_P42305 UniRef50: UniRef50_P42305

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mRNA

Protein

UniprotKB

Description

Refseq

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全选

Pubmed编号	文献信息	发表日期	相关基因
29280348	Bacillus subtilis, the model Gram-positive bacterium: 20Â years of annotation refinement. Microb Biotechnol Rainer Borriss , Antoine Danchin , Colin R Harwood , Claudine MÃ©digue , Eduardo P C Rocha , Agnieszka Sekowska , David Vallenet	2018-01-01	-
23429746	An updated metabolic view of the Bacillus subtilis 168 genome. Microbiology (Reading, Engl.) Eugeni Belda , Agnieszka Sekowska , FranÃ§ois Le FÃ¨vre , Anne Morgat , Damien Mornico , Christos Ouzounis , David Vallenet , Claudine MÃ©digue , Antoine Danchin	2013-04-01	-
20691700	A structural model for the DEAD box helicase YxiN in solution: localization of the RNA binding domain. J. Mol. Biol. Anne R Karow , Dagmar Klostermeier	2010-10-01	deaD
19839642	The DEAD box helicase YxiN maintains a closed conformation during ATP hydrolysis. Biochemistry Regula Aregger , Dagmar Klostermeier	2009-11-17	deaD
19383706	From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Microbiology (Reading) ValÃ©rie Barbe , StÃ©phane Cruveiller , Frank Kunst , Patricia Lenoble , Guillaume Meurice , Agnieszka Sekowska , David Vallenet , Tingzhang Wang , Ivan Moszer , Claudine MÃ©digue , Antoine Danchin	2009-06-01	-
18184816	Cooperative binding of ATP and RNA induces a closed conformation in a DEAD box RNA helicase. Proc. Natl. Acad. Sci. U.S.A. Bettina Theissen , Anne R Karow , JÃ¼rgen KÃ¶hler , Airat Gubaev , Dagmar Klostermeier	2008-01-15	deaD
17229151	Authentic interdomain communication in an RNA helicase reconstituted by expressed protein ligation of two helicase domains. FEBS J. Anne R Karow , Bettina Theissen , Dagmar Klostermeier	2007-01-01	deaD
17142894	Structure of the second domain of the Bacillus subtilis DEAD-box RNA helicase YxiN. Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. Jonathan M Caruthers , YaoXiong Hu , David B McKay	2006-12-01	-
16611943	The domain of the Bacillus subtilis DEAD-box helicase YxiN that is responsible for specific binding of 23S rRNA has an RNA recognition motif fold. RNA Shuying Wang , Yaoxiong Hu , Michael T Overgaard , Fedor V Karginov , Olke C Uhlenbeck , David B McKay	2006-06-01	-
16118224	YxiN is a modular protein combining a DEx(D/H) core and a specific RNA-binding domain. J Biol Chem Fedor V Karginov , Jonathan M Caruthers , YaoXiong Hu , David B McKay , Olke C Uhlenbeck	2005-10-21	-

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