Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei.

Mol Cell Proteomics     Domenico Fasci , Hugo van Ingen , Richard A Scheltema , Albert J R Heck

Ataxin-3 like (ATXN3L), a member of the Josephin family of deubiquitinating enzymes, promotes breast cancer proliferation by deubiquitinating Krüppel-like factor 5 (KLF5).

Oncotarget     Fei Ge , Wenlin Chen , Junying Qin , Zhongmei Zhou , Rong Liu , Linlin Liu , Jing Tan , Tianning Zou , Hongyuan Li , Guosheng Ren , Ceshi Chen

A microarray of ubiquitylated proteins for profiling deubiquitylase activity reveals the critical roles of both chain and substrate.

Biochim Biophys Acta     Christian M Loch , James E Strickler

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.

Brief. Bioinformatics     Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas

Crystal structure of a Josephin-ubiquitin complex: evolutionary restraints on ataxin-3 deubiquitinating activity.

J Biol Chem     Stephen D Weeks , Kimberly C Grasty , Lisa Hernandez-Cuebas , Patrick J Loll

Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes.

Genome Res.     Kouichi Kimura , Ai Wakamatsu , Yutaka Suzuki , Toshio Ota , Tetsuo Nishikawa , Riu Yamashita , Jun-ichi Yamamoto , Mitsuo Sekine , Katsuki Tsuritani , Hiroyuki Wakaguri , Shizuko Ishii , Tomoyasu Sugiyama , Kaoru Saito , Yuko Isono , Ryotaro Irie , Norihiro Kushida , Takahiro Yoneyama , Rie Otsuka , Katsuhiro Kanda , Takahide Yokoi , Hiroshi Kondo , Masako Wagatsuma , Katsuji Murakawa , Shinichi Ishida , Tadashi Ishibashi , Asako Takahashi-Fujii , Tomoo Tanase , Keiichi Nagai , Hisashi Kikuchi , Kenta Nakai , Takao Isogai , Sumio Sugano

The DNA sequence of the human X chromosome.

Nature     Mark T Ross , Darren V Grafham , Alison J Coffey , Steven Scherer , Kirsten McLay , Donna Muzny , Matthias Platzer , Gareth R Howell , Christine Burrows , Christine P Bird , Adam Frankish , Frances L Lovell , Kevin L Howe , Jennifer L Ashurst , Robert S Fulton , Ralf Sudbrak , Gaiping Wen , Matthew C Jones , Matthew E Hurles , T Daniel Andrews , Carol E Scott , Stephen Searle , Juliane Ramser , Adam Whittaker , Rebecca Deadman , Nigel P Carter , Sarah E Hunt , Rui Chen , Andrew Cree , Preethi Gunaratne , Paul Havlak , Anne Hodgson , Michael L Metzker , Stephen Richards , Graham Scott , David Steffen , Erica Sodergren , David A Wheeler , Kim C Worley , Rachael Ainscough , Kerrie D Ambrose , M Ali Ansari-Lari , Swaroop Aradhya , Robert I S Ashwell , Anne K Babbage , Claire L Bagguley , Andrea Ballabio , Ruby Banerjee , Gary E Barker , Karen F Barlow , Ian P Barrett , Karen N Bates , David M Beare , Helen Beasley , Oliver Beasley , Alfred Beck , Graeme Bethel , Karin Blechschmidt , Nicola Brady , Sarah Bray-Allen , Anne M Bridgeman , Andrew J Brown , Mary J Brown , David Bonnin , Elspeth A Bruford , Christian Buhay , Paula Burch , Deborah Burford , Joanne Burgess , Wayne Burrill , John Burton , Jackie M Bye , Carol Carder , Laura Carrel , Joseph Chako , Joanne C Chapman , Dean Chavez , Ellson Chen , Guan Chen , Yuan Chen , Zhijian Chen , Craig Chinault , Alfredo Ciccodicola , Sue Y Clark , Graham Clarke , Chris M Clee , Sheila Clegg , Kerstin Clerc-Blankenburg , Karen Clifford , Vicky Cobley , Charlotte G Cole , Jen S Conquer , Nicole Corby , Richard E Connor , Robert David , Joy Davies , Clay Davis , John Davis , Oliver Delgado , Denise Deshazo , Pawandeep Dhami , Yan Ding , Huyen Dinh , Steve Dodsworth , Heather Draper , Shannon Dugan-Rocha , Andrew Dunham , Matthew Dunn , K James Durbin , Ireena Dutta , Tamsin Eades , Matthew Ellwood , Alexandra Emery-Cohen , Helen Errington , Kathryn L Evans , Louisa Faulkner , Fiona Francis , John Frankland , Audrey E Fraser , Petra Galgoczy , James Gilbert , Rachel Gill , Gernot Glöckner , Simon G Gregory , Susan Gribble , Coline Griffiths , Russell Grocock , Yanghong Gu , Rhian Gwilliam , Cerissa Hamilton , Elizabeth A Hart , Alicia Hawes , Paul D Heath , Katja Heitmann , Steffen Hennig , Judith Hernandez , Bernd Hinzmann , Sarah Ho , Michael Hoffs , Phillip J Howden , Elizabeth J Huckle , Jennifer Hume , Paul J Hunt , Adrienne R Hunt , Judith Isherwood , Leni Jacob , David Johnson , Sally Jones , Pieter J de Jong , Shirin S Joseph , Stephen Keenan , Susan Kelly , Joanne K Kershaw , Ziad Khan , Petra Kioschis , Sven Klages , Andrew J Knights , Anna Kosiura , Christie Kovar-Smith , Gavin K Laird , Cordelia Langford , Stephanie Lawlor , Margaret Leversha , Lora Lewis , Wen Liu , Christine Lloyd , David M Lloyd , Hermela Loulseged , Jane E Loveland , Jamieson D Lovell , Ryan Lozado , Jing Lu , Rachael Lyne , Jie Ma , Manjula Maheshwari , Lucy H Matthews , Jennifer McDowall , Stuart McLaren , Amanda McMurray , Patrick Meidl , Thomas Meitinger , Sarah Milne , George Miner , Shailesh L Mistry , Margaret Morgan , Sidney Morris , Ines Müller , James C Mullikin , Ngoc Nguyen , Gabriele Nordsiek , Gerald Nyakatura , Christopher N O'Dell , Geoffery Okwuonu , Sophie Palmer , Richard Pandian , David Parker , Julia Parrish , Shiran Pasternak , Dina Patel , Alex V Pearce , Danita M Pearson , Sarah E Pelan , Lesette Perez , Keith M Porter , Yvonne Ramsey , Kathrin Reichwald , Susan Rhodes , Kerry A Ridler , David Schlessinger , Mary G Schueler , Harminder K Sehra , Charles Shaw-Smith , Hua Shen , Elizabeth M Sheridan , Ratna Shownkeen , Carl D Skuce , Michelle L Smith , Elizabeth C Sotheran , Helen E Steingruber , Charles A Steward , Roy Storey , R Mark Swann , David Swarbreck , Paul E Tabor , Stefan Taudien , Tineace Taylor , Brian Teague , Karen Thomas , Andrea Thorpe , Kirsten Timms , Alan Tracey , Steve Trevanion , Anthony C Tromans , Michele d'Urso , Daniel Verduzco , Donna Villasana , Lenee Waldron , Melanie Wall , Qiaoyan Wang , James Warren , Georgina L Warry , Xuehong Wei , Anthony West , Siobhan L Whitehead , Mathew N Whiteley , Jane E Wilkinson , David L Willey , Gabrielle Williams , Leanne Williams , Angela Williamson , Helen Williamson , Laurens Wilming , Rebecca L Woodmansey , Paul W Wray , Jennifer Yen , Jingkun Zhang , Jianling Zhou , Huda Zoghbi , Sara Zorilla , David Buck , Richard Reinhardt , Annemarie Poustka , André Rosenthal , Hans Lehrach , Alfons Meindl , Patrick J Minx , Ladeana W Hillier , Huntington F Willard , Richard K Wilson , Robert H Waterston , Catherine M Rice , Mark Vaudin , Alan Coulson , David L Nelson , George Weinstock , John E Sulston , Richard Durbin , Tim Hubbard , Richard A Gibbs , Stephan Beck , Jane Rogers , David R Bentley

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.

Proc. Natl. Acad. Sci. U.S.A.     Robert L Strausberg , Elise A Feingold , Lynette H Grouse , Jeffery G Derge , Richard D Klausner , Francis S Collins , Lukas Wagner , Carolyn M Shenmen , Gregory D Schuler , Stephen F Altschul , Barry Zeeberg , Kenneth H Buetow , Carl F Schaefer , Narayan K Bhat , Ralph F Hopkins , Heather Jordan , Troy Moore , Steve I Max , Jun Wang , Florence Hsieh , Luda Diatchenko , Kate Marusina , Andrew A Farmer , Gerald M Rubin , Ling Hong , Mark Stapleton , M Bento Soares , Maria F Bonaldo , Tom L Casavant , Todd E Scheetz , Michael J Brownstein , Ted B Usdin , Shiraki Toshiyuki , Piero Carninci , Christa Prange , Sam S Raha , Naomi A Loquellano , Garrick J Peters , Rick D Abramson , Sara J Mullahy , Stephanie A Bosak , Paul J McEwan , Kevin J McKernan , Joel A Malek , Preethi H Gunaratne , Stephen Richards , Kim C Worley , Sarah Hale , Angela M Garcia , Laura J Gay , Stephen W Hulyk , Debbie K Villalon , Donna M Muzny , Erica J Sodergren , Xiuhua Lu , Richard A Gibbs , Jessica Fahey , Erin Helton , Mark Ketteman , Anuradha Madan , Stephanie Rodrigues , Amy Sanchez , Michelle Whiting , Anup Madan , Alice C Young , Yuriy Shevchenko , Gerard G Bouffard , Robert W Blakesley , Jeffrey W Touchman , Eric D Green , Mark C Dickson , Alex C Rodriguez , Jane Grimwood , Jeremy Schmutz , Richard M Myers , Yaron S N Butterfield , Martin I Krzywinski , Ursula Skalska , Duane E Smailus , Angelique Schnerch , Jacqueline E Schein , Steven J M Jones , Marco A Marra , Mammalian Gene Collection Program Team

The genomic structure and expression of MJD, the Machado-Joseph disease gene.

J. Hum. Genet.     Y Ichikawa , J Goto , M Hattori , A Toyoda , K Ishii , S Y Jeong , H Hashida , N Masuda , K Ogata , F Kasai , M Hirai , P Maciel , G A Rouleau , Y Sakaki , I Kanazawa