| Type | Description |
|---|---|
| Definition | RNA polymerase factor sigma-54 |
| Date | Results | Publications |
|---|---|---|
| 2016-05-07 12:10:00 | intragenic sigma54 binding sites is non-random, and many intragenic sigma54 binding sites are conserved. We conclude that many intragenic sigma54 binding sites are likely to be functional. | 26425847 |
| Type | IDs |
|---|---|
| Gene |
UniProtKB-ID:
Q8X9I9_ECO57
UniprotKB:
Q8X9I9
UniParc:
UPI00000D07FB
EMBL:
CP038287,
CP038360,
CP038336,
SEKQ01000004,
CP038309,
CP038412,
CP038425,
CP038313,
CP038357,
CP038339,
CP039834,
CP040107,
CP038290,
CP038282,
CP038349,
CP038376,
CP038302,
CP038414,
CP038342,
CP038380,
CP038344,
CP038366,
CP038423,
CP038333,
CP038402,
CP038374,
CP038408,
CP038324,
CP038353,
BA000007,
CP038363,
CP038346,
CP038319,
CP038416,
CP038372,
CP038300,
CP038369,
CP038284,
CP038421,
CP038351,
CP038398,
CP038305,
CP038428,
CP038316,
CP038419,
CP038321,
CP038405,
CP038328
EnsemblGenome:
Z4565
KO:
ecs:ECs4081
|
| Nucleutide sequences |
EMBL-CDS:
QKB52146.1,
QKB15833.1,
QKA02807.1,
QKQ83948.1,
QKA13822.1,
QKB62756.1,
QKA19393.1,
BAB37504.1,
QKB46685.1,
QKQ78632.1,
QKB57442.1,
QKA35574.1,
QJZ92347.1,
QJZ43950.1,
QJZ97554.1,
QJZ81518.1,
QKA46096.1,
QJZ49343.1,
QJZ87053.1,
QKB94861.1,
QKB41526.1,
QKA72913.1,
QKB73470.1,
QKA30230.1,
QKA56784.1,
QJZ76114.1,
QKB84258.1,
QKA62222.1,
QKB14175.1,
QKB78855.1,
QKA83581.1,
QKB68113.1,
NEV30488.1,
QKA99673.1,
QKA40914.1,
QJZ38554.1,
QKA78296.1,
QJZ33196.1,
QKA51585.1,
QKA94297.1,
QJZ65159.1,
QKB08822.1,
QKA08302.1,
QKA88926.1,
QKB89525.1,
QKA24836.1,
QJZ70562.1,
QKC03238.1
Gene_ORFName:
E3172_03165,
E4U67_03135,
E3153_03140,
E3166_03135,
E4U80_03135,
E4U63_03135,
E3154_03135,
E4U78_03140,
E4U90_03230,
E4U69_03135,
FDZ86_03135,
E3149_19975,
E3150_03135,
E4T53_03140,
E3165_03145,
E4U74_03135,
E4U84_03140,
E3170_03230,
E3161_03135,
E4U70_03140,
FCV42_03130,
E4U81_03140,
E4U86_03160,
E4U66_03140,
E4U89_03170,
E3159_25180,
E4U77_03250,
E3169_03135,
E3173_03135,
E4U73_03265,
E4U64_03140,
E4U76_03140,
E4U87_03205,
E4U79_03140,
ECs_4081,
E3168_03135,
E3167_03135,
E3163_03135,
E3162_03135,
E3164_03230,
E3160_24375,
E4U72_03245,
E4U62_03135,
E3151_03140,
E3152_03145,
E4U08_03140,
EVY27_07940,
E4U68_03140
|
| Protein sequencees |
RefSeq:
NP_312108.1
|
| Others |
UniRef100:
UniRef100_C3SS82
UniRef90:
UniRef90_P24255
UniRef50:
UniRef50_P24255
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
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Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
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