YNL040W - putative alanine--tRNA ligase-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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855688 YNL040W

基因描述

Type	Description
Definition	putative alanine--tRNA ligase

研究结论

Date	Results	Publications
2014-12-06 13:34:00	deletion of YNL040W increased the rate of premature stop codon bypass and reduced the rate of protein synthesis connecting its activity to the process of protein biosynthesis.	24535059

名称对应

Type	IDs
Gene	UniProtKB-ID: YNE0_YEAST UniprotKB: P53960 UniParc: UPI000013BB0A EMBL: Z71316, BK006947 EnsemblGenome: YNL040W KO: sce:YNL040W
Nucleutide sequences	EMBL-CDS: DAA10505.1, CAA95907.1 Gene_ORFName: N2679 EnsemblGenome_TRS: YNL040W_mRNA
Protein sequencees	EnsemblGenome_PRO: YNL040W RefSeq: NP_014358.3
Others	UniRef100: UniRef100_P53960 UniRef90: UniRef90_P53960 UniRef50: UniRef50_P53960

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mRNA

Protein

UniprotKB

Description

Refseq

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Ensembl: {{protein.nucleotideEnsembl}}

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Location

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Pubmed编号	文献信息	发表日期	相关基因
30053068	Mud2 functions in transcription by recruiting the Prp19 and TREX complexes to transcribed genes. Nucleic Acids Res. Rashmi Minocha , Varvara Popova , Daria Kopytova , Danny Misiak , Stefan HÃ¼ttelmaier , Sofia Georgieva , Katja StrÃ¤Ãer	2018-10-12	-
29158339	Genome-Wide Mapping of Decay Factor-mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4. G3 (Bethesda) Jason E Miller , Liye Zhang , Haoyang Jiang , Yunfei Li , B Franklin Pugh , Joseph C Reese	2018-01-04	-
27708008	A global genetic interaction network maps a wiring diagram of cellular function. Science Michael Costanzo , Benjamin VanderSluis , Elizabeth N Koch , Anastasia Baryshnikova , Carles Pons , Guihong Tan , Wen Wang , Matej Usaj , Julia Hanchard , Susan D Lee , Vicent Pelechano , Erin B Styles , Maximilian Billmann , Jolanda van Leeuwen , Nydia van Dyk , Zhen-Yuan Lin , Elena Kuzmin , Justin Nelson , Jeff S Piotrowski , Tharan Srikumar , Sondra Bahr , Yiqun Chen , Raamesh Deshpande , Christoph F Kurat , Sheena C Li , Zhijian Li , Mojca Mattiazzi Usaj , Hiroki Okada , Natasha Pascoe , Bryan-Joseph San Luis , Sara Sharifpoor , Emira Shuteriqi , Scott W Simpkins , Jamie Snider , Harsha Garadi Suresh , Yizhao Tan , Hongwei Zhu , Noel Malod-Dognin , Vuk Janjic , Natasa Przulj , Olga G Troyanskaya , Igor Stagljar , Tian Xia , Yoshikazu Ohya , Anne-Claude Gingras , Brian Raught , Michael Boutros , Lars M Steinmetz , Claire L Moore , Adam P Rosebrock , Amy A Caudy , Chad L Myers , Brenda Andrews , Charles Boone	2016-09-23	-
25817432	Cmr1/WDR76 defines a nuclear genotoxic stress body linking genome integrity and protein quality control. Nat Commun Irene Gallina , Camilla Colding , Peter Henriksen , Petra Beli , Kyosuke Nakamura , Judith Offman , David P Mathiasen , Sonia Silva , Eva Hoffmann , Anja Groth , Chunaram Choudhary , Michael Lisby	2015-03-30	-
24535059	A global investigation of gene deletion strains that affect premature stop codon bypass in yeast, Saccharomyces cerevisiae. Mol Biosyst Bahram Samanfar , Le Hoa Tan , Kristina Shostak , Firoozeh Chalabian , Zongbin Wu , Md Alamgir , Noor Sunba , Daniel Burnside , Katayoun Omidi , Mohsen Hooshyar , Imelda GalvÃ¡n MÃ¡rquez , Matthew Jessulat , Myron L Smith , Mohan Babu , Ali Azizi , Ashkan Golshani	2014-04-01	BSC2, OLA1, YNL040W
23390603	Saccharomyces cerevisiae genetics predicts candidate therapeutic genetic interactions at the mammalian replication fork. G3 (Bethesda) Derek M van Pel , Peter C Stirling , Sean W Minaker , Payal Sipahimalani , Philip Hieter	2013-02-01	-
23409723	Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae. Genome Biol. Mallory A Freeberg , Ting Han , James J Moresco , Andy Kong , Yu-Cheng Yang , Zhi John Lu , John R Yates , John K Kim	2013-01-01	YGR240C-A, YIR021W-A, YGR161W-C, YLR146W-A, LRE1, GLK1, GFD2, MRPL32, CIT2, PGK1, CTO1, YCR023C, PMP1, RIM1, PHO87, IMG1, CPR4, PAT1, TUP1, RGD2, YPT1, TUB2, RPO41, RPL22B, GYP8, STE2, GAT1, HSP12, YFH7, CDC14, QCR6, SAP155, YFR045W, HXK1, GPI13, HSP104, SSA2, PUF3, COX17, COF1, YBT1, DNM1, SNF7, SED5, RPL15A, MLH2, YLR035C-A, PDC1, YLR046C, RPS0B, REX2, RPL22A, PER33, MEF1, RPL10, XDJ1, CHA4, ICT1, AHP1, CFT2, YPS1, ZRT2, SLS1, STM1, MAS1, RPS31, CBF5, YLR177W, SAM1, EMG1, UPS1, NOP56, QRI5, ENT2, COA4, CDC42, CSC1, MAP1, YEF3, SYM1, MCP2, YLR257W, GSY2, HSP60, RPS28B, DBP9, YSH1, YLR278C, YLR283W, CTS1, RPS30A, GSP1, EXG1, ACO1, IMH1, RPL38, RPS25B, FKS1, ILV5
22282571	Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs. Genome Res. Sara Sharifpoor , Dewald van Dyk , Michael Costanzo , Anastasia Baryshnikova , Helena Friesen , Alison C Douglas , Ji-Young Youn , Benjamin VanderSluis , Chad L Myers , BalÃ¡zs Papp , Charles Boone , Brenda J Andrews	2012-04-01	SUS1, VMA9, YCL075W, YCL074W, VAC17, MRC1, PEX34, KAR4, PBN1, LRE1, SPS22, MGR1, YCL042W, GLK1, GID7, ATG22, SRO9, STE50, RRP7, BIK1, FUS1, FRM2, AGP1, DCC1, BUD3, SGF29, ILV6, YCL002C, RER1, CDC10, YCR007C, SAT4, RVS161, ADP1, YCR016W, CWH43, MAK32, PET18, SLM5, RIM1, SYP1, BPH1, SNT1, ELO2, PER1, YCR051W, THR4, TAH1, YCR061W, BUD31, RAD18, SED4, ATG15, IMG2, RSA4, SOL2, ERS1, PAT1, TRX3, CSM1, ABP1, YCR090C, KIN82, YCR102C, PAU3, YFL068W, AGP3, YFL054C, ZNF1, SWP82, SEC53, YFL040W, ACT1, YPT1, RPO41, RIM15, BST1, BUD27, FRS2, MDJ1, HSP12, IES1, BLM10, VTC2, DEG1, RPN11, FAR7, GCN20, UBP6, DCV1, CMK1, GSY1, PES4, PTR3, MET10, RRT5, RPL29, RSC8, SAP155
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
20508643	Cdc48 and Ufd3, new partners of the ubiquitin protease Ubp3, are required for ribophagy. EMBO Rep Batool Ossareh-Nazari , MÃ©lanie Bonizec , Mickael Cohen , Svetlana Dokudovskaya , FranÃ§ois Delalande , Christine Schaeffer , Alain Van Dorsselaer , Catherine Dargemont	2010-07-01	-

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