TRM13 - tRNA:m4X modification enzyme-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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853995 TRM13

基因描述

Type	Description
Definition	tRNA:m4X modification enzyme

研究结论

Date	Results	Publications
2010-05-03 11:23:00	Trm13 is a strongly diverged member of the Rossmann-fold MTase (RFM) superfamily, and therefore is evolutionarily related to 2'-O-MTases such as Trm7 and fibrillarin.	19697067
2010-01-21 00:00:00	ORF YOL125w (TRM13) is necessary and sufficient for 2'-O-methylation at position 4 of yeast tRNA.	17242307

名称对应

Type	IDs
Gene	UniProtKB-ID: TRM13_YEAST UniprotKB: Q12383 UniParc: UPI000006A25C EMBL: U41293, Z74867, BK006948 EnsemblGenome: YOL125W KO: sce:YOL125W
Nucleutide sequences	EMBL-CDS: DAA10659.1, CAA99144.1, AAC49467.1 EnsemblGenome_TRS: YOL125W_mRNA
Protein sequencees	EnsemblGenome_PRO: YOL125W RefSeq: NP_014516.1
Others	UniRef100: UniRef100_Q12383 UniRef90: UniRef90_Q12383 UniRef50: UniRef50_Q12383

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
32053677	2'-O-ribose methylation of transfer RNA promotes recovery from oxidative stress in Saccharomyces cerevisiae. PLoS ONE Lauren Endres , Rebecca E Rose , Frank Doyle , Taylor Rahn , Bethany Lee , Jessica Seaman , William D McIntyre , Daniele Fabris	2020-01-01	-
28739661	Histone Acetylation, Not Stoichiometry, Regulates Linker Histone Binding in Saccharomyces cerevisiae. Genetics Mackenzie B D Lawrence , Nicolas Coutin , Jennifer K Choi , Benjamin J E Martin , Nicholas A T Irwin , Barry Young , Christopher Loewen , LeAnn J Howe	2017-09-01	-
28325876	Comprehensive and quantitative mapping of RNA-protein interactions across a transcribed eukaryotic genome. Proc Natl Acad Sci U S A Richard She , Anupam K Chakravarty , Curtis J Layton , Lauren M Chircus , Johan O L Andreasson , Nandita Damaraju , Peter L McMahon , Jason D Buenrostro , Daniel F Jarosz , William J Greenleaf	2017-04-04	-
27708008	A global genetic interaction network maps a wiring diagram of cellular function. Science Michael Costanzo , Benjamin VanderSluis , Elizabeth N Koch , Anastasia Baryshnikova , Carles Pons , Guihong Tan , Wen Wang , Matej Usaj , Julia Hanchard , Susan D Lee , Vicent Pelechano , Erin B Styles , Maximilian Billmann , Jolanda van Leeuwen , Nydia van Dyk , Zhen-Yuan Lin , Elena Kuzmin , Justin Nelson , Jeff S Piotrowski , Tharan Srikumar , Sondra Bahr , Yiqun Chen , Raamesh Deshpande , Christoph F Kurat , Sheena C Li , Zhijian Li , Mojca Mattiazzi Usaj , Hiroki Okada , Natasha Pascoe , Bryan-Joseph San Luis , Sara Sharifpoor , Emira Shuteriqi , Scott W Simpkins , Jamie Snider , Harsha Garadi Suresh , Yizhao Tan , Hongwei Zhu , Noel Malod-Dognin , Vuk Janjic , Natasa Przulj , Olga G Troyanskaya , Igor Stagljar , Tian Xia , Yoshikazu Ohya , Anne-Claude Gingras , Brian Raught , Michael Boutros , Lars M Steinmetz , Claire L Moore , Adam P Rosebrock , Amy A Caudy , Chad L Myers , Brenda Andrews , Charles Boone	2016-09-23	-
27519690	Systematic identification of genes involved in metabolic acid stress resistance in yeast and their potential as cancer targets. Dis Model Mech John J Shin , Qurratulain Aftab , Pamela Austin , Jennifer A McQueen , Tak Poon , Shu Chen Li , Barry P Young , Calvin D Roskelley , Christopher J R Loewen	2016-09-01	-
23332755	The cotranslational function of ribosome-associated Hsp70 in eukaryotic protein homeostasis. Cell Felix Willmund , Marta del Alamo , Sebastian Pechmann , Taotao Chen , VÃ©ronique AlbanÃ¨se , Eric B Dammer , Junmin Peng , Judith Frydman	2013-01-17	VAC17, MIC10, PRD1, KAR4, PBN1, APA1, POF1, MGR1, GLK1, SRO9, GFD2, GRX1, LSB5, RNQ1, HBN1, DCC1, GBP2, ILV6, STP22, CDC10, YCP4, CIT2, RVS161, PGK1, RHB1, RIM1, SYP1, RPS14A, RRP43, YCR043C, YCR051W, THR4, CTR86, PWP2, YIH1, TAH1, HCM1, RSA4, SOL2, FUB1, PAT1, AHC2, TRX3, TUP1, CSM1, YCR090C, MSH3, YCR102C, SNZ3, SWP82, RGD2, SEC53, OTU1, ACT1, YPT1, TUB2, MOB2, RPL22B, HAC1, CAF16, FRS2, GAT1, LPD1, BLM10, SEC4, VTC2, SPB4, RPN11, YFR006W, YFH7, IOC3, ATG18, LSB3, HIS2, CDC14, RPL2A, DUG1, BNA6, RMD8, YMR31, PRE4, RET2, RPN12, HXK1, IRC7, GRC3, RIX7, YLL032C, FRA1, ISA1, HSP104, SSA2, HIF1, DPS1, LMO1, ORC3, RTT109, MHT1, YLL058W
23209445	The yeast SR-like protein Npl3 links chromatin modification to mRNA processing. PLoS Genet Erica A Moehle , Colm J Ryan , Nevan J Krogan , Tracy L Kress , Christine Guthrie	2012-01-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
19697067	Trm13p, the tRNA:Xm4 modification enzyme from Saccharomyces cerevisiae is a member of the Rossmann-fold MTase superfamily: prediction of structure and active site. J Mol Model Karolina L Tkaczuk	2010-03-01	TRM13
18467557	An in vivo map of the yeast protein interactome. Science Kirill Tarassov , Vincent Messier , Christian R Landry , Stevo Radinovic , Mercedes M Serna Molina , Igor Shames , Yelena Malitskaya , Jackie Vogel , Howard Bussey , Stephen W Michnick	2008-06-13	SUS1, YBR296C-A, LSO2, YOR316C-A, YNR075C-A, VAC17, PEX34, KAR4, GID7, SRO9, FRM2, YCL021W-A, DCC1, SGF29, CIT2, RVS161, HSP30, RIM1, SYP1, SNT1, MATALPHA1, YCR043C, PWP2, YIH1, CPR4, ERS1, PAT1, TUP1, MSH3, CDC39, CDC50, OCA4, COS4, DAK2, EMP47, RGD2, FET5, YFL040W, YPT1, RPO41, STE2, GAT1, SEC4, MSH4, LOC1, NIC96, YPI1, RPN11, FAR7, UBP6, ATG18, LSB3, HIS2, SAP155, ERJ5, RET2, RIX7, IRC19, GPI13, TPO1, HIF1, SPA2, SDC25, PUF3, YEH1, SOF1, AYT1, MHT1, MMP1, YBT1, FPS1, DNM1, SSK1, YEH2, SDO1, SNF7, AAT2, ADE16, RSC58, MLH2, STU2, ERG3, SPC3, FMP25, SIC1, SRL2, EMP70, RAX2, GAA1, ALT1, ERG27, CCW12, HOG1, DIP2, PDC5, NHA1, ACF2, ASP3-4, SEC10

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