AT1G78420 - RING/U-box superfamily protein-BMKCloudï½ç¾è¿å®¢äº

844178 AT1G78420

基因描述

Type	Description
Definition	RING/U-box superfamily protein

研究结论

Date	Results	Publications
2015-05-16 12:53:00	Genetic analyses show that DA2 functions synergistically with DA1 to regulate seed size, but does so independently of EOD1. Further results reveal that DA2 interacts physically with DA1 in vitro and in vivo.	24045020

名称对应

Type	IDs
Synonymous	DA (large in Chinese) 2, DA2, F3F9.7, F3F9_7
Gene	UniProtKB-ID: DA2_ARATH, A0A178WG89_ARATH UniprotKB: Q93YV5, A0A178WG89 UniParc: UPI00000A61E4 EMBL: LUHQ01000001, AY059751, CACRSJ010000104, AC013430, CP002684, AY091398 EnsemblGenome: AT1G78420 KO: ath:AT1G78420
Nucleutide sequences	EMBL-CDS: AAL24099.1, AAF71811.1, AEE36104.1, AEE36103.1, AAM14337.1, OAP17367.1, VYS51416.1 Gene_ORFName: F3F9.7, AN1_LOCUS6886 EnsemblGenome_TRS: AT1G78420.1, AT1G78420.2
Protein sequencees	EnsemblGenome_PRO: AT1G78420.2, AT1G78420.1 RefSeq: NP_565180.1, NP_001185425.1
Others	UniRef100: UniRef100_Q93YV5 UniRef90: UniRef90_Q93YV5 UniRef50: UniRef50_Q93YV5 UniGene: At.14800

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

暂无数据

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全选

Pubmed编号	文献信息	发表日期	相关基因
24045020	The ubiquitin receptor DA1 interacts with the E3 ubiquitin ligase DA2 to regulate seed and organ size in Arabidopsis. Plant Cell Tian Xia , Na Li , Jack Dumenil , Jie Li , Andrei Kamenski , Michael W Bevan , Fan Gao , Yunhai Li	2013-09-01	-
23449474	Regulation of leaf maturation by chromatin-mediated modulation of cytokinin responses. Dev. Cell Idan Efroni , Soon-Ki Han , Hye Jin Kim , Miin-Feng Wu , Evyatar Steiner , Kenneth D Birnbaum , Jong Chan Hong , Yuval Eshed , Doris Wagner	2013-02-25	TCP1, AT4G15248, SGR5, HMGB4, bZIP2, HB21, GPRI1, AT2G20880, AT2G21230, AT2G22200, AT2G22760, NAI1, LBD10, NAC038, AT2G26940, SYD, HSI2, AT2G31220, AT2G31370, MYB101, SWI3B, ETT, ERF38, E2F3, HRD, NF-YB8, TTG2, AS1, AT2G38250, CZF1, AT2G40350, AT2G42280, BRM, GBF3, WRKY46, MYB12, SWI3A, NAC046, AT3G06590, AT3G07340, EDA31, AT3G13040, LBD22, MYB26, RAP2.2, TCP4, NAC3, BSH, PTF1, BET10, HB-1, ZFN1, HB20, COL2, ZF2, AT3G21890, DMC1, MYB15, AT3G24490, ABI3, AT3G24860, TCP20, AT3G27220, TDF1, MYB121, bZIP42, TCP16, PCL1, PYE, LBD38, HEC2, AT3G50650, MYB109, AT3G57600, LBD29, HAM2, CRF6, ARF18, AT3G61950, NGA2, MYB74, TT8, NGA4, MYB102, AT4G15250, AT4G16430, AT4G17780, AT4G00870, AT4G01460, UNE12, AT4G02810, WRKY31, WRKY53, AT4G27880, MYB41, NAC074, IAA11, RR10, RSL2
11130712	Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Nature A Theologis , J R Ecker , C J Palm , N A Federspiel , S Kaul , O White , J Alonso , H Altafi , R Araujo , C L Bowman , S Y Brooks , E Buehler , A Chan , Q Chao , H Chen , R F Cheuk , C W Chin , M K Chung , L Conn , A B Conway , A R Conway , T H Creasy , K Dewar , P Dunn , P Etgu , T V Feldblyum , J Feng , B Fong , C Y Fujii , J E Gill , A D Goldsmith , B Haas , N F Hansen , B Hughes , L Huizar , J L Hunter , J Jenkins , C Johnson-Hopson , S Khan , E Khaykin , C J Kim , H L Koo , I Kremenetskaia , D B Kurtz , A Kwan , B Lam , S Langin-Hooper , A Lee , J M Lee , C A Lenz , J H Li , Y Li , X Lin , S X Liu , Z A Liu , J S Luros , R Maiti , A Marziali , J Militscher , M Miranda , M Nguyen , W C Nierman , B I Osborne , G Pai , J Peterson , P K Pham , M Rizzo , T Rooney , D Rowley , H Sakano , S L Salzberg , J R Schwartz , P Shinn , A M Southwick , H Sun , L J Tallon , G Tambunga , M J Toriumi , C D Town , T Utterback , S Van Aken , M Vaysberg , V S Vysotskaia , M Walker , D Wu , G Yu , C M Fraser , J C Venter , R W Davis	2000-12-14	AT1G27045, AT1G24095, AT1G12855, AT1G63295, AT1G45163, AT1G20735, AT1G51035, AT1G55207, AT1G25145, AT1G53023, AT1G29025, AT1G19396, AT1G26515, AT1G78476, AT1G71866, AT1G36922, AT1G47578, AT1G11125, AT1G02575, AT1G25150, AT1G62914, AT1G51020, AT1G03365, AT1G53025, AT1G50732, AT1G09794, AT1G64583, AT1G05675, AT1G33612, AT1G03103, AT1G03106, AT1G05085, AT1G06135, AT1G06475, DSI-1VOC, AT1G07730, AT1G07985, AT1G08125, AT1G12805, AT1G13635, AT1G16515, AT1G17285, AT1G18265, AT1G19394, AT1G19397, AT1G21395, AT1G23465, AT1G23935, AT1G24580, AT1G26798, AT1G26799, AT1G28695, AT1G30475, AT1G31835, AT1G43666, AT1G45165, AT1G48195, AT1G48325, ATHAL3B, AT1G52315, CDT1, AT1G52855, AT1G52905, AT1G53285, AT1G53785, AT1G53815, AT1G54217, AT1G54575, AT1G55475, AT1G55675, AT1G56045, AT1G56415, AT1G58242, AT1G59865, SCRL5, AT1G61097, AT1G61105, BRD4, AT1G62085, AT1G63055, AT1G64065, AT1G64235, AT1G64255, AT1G72645, AT1G76955, AT1G77885, GL22, AT1G03495, AT1G03982, AT1G04625, AT1G05894, AT1G06645, AT1G06923, YAB2, SCRL3, AT1G09157, AT1G10417, AT1G10850, AT1G12064

Pubmed编号

文献信息

发表日期

相关基因

24045020

The ubiquitin receptor DA1 interacts with the E3 ubiquitin ligase DA2 to regulate seed and organ size in Arabidopsis.

Plant Cell Tian Xia , Na Li , Jack Dumenil , Jie Li , Andrei Kamenski , Michael W Bevan , Fan Gao , Yunhai Li

2013-09-01

23449474

Regulation of leaf maturation by chromatin-mediated modulation of cytokinin responses.

Dev. Cell Idan Efroni , Soon-Ki Han , Hye Jin Kim , Miin-Feng Wu , Evyatar Steiner , Kenneth D Birnbaum , Jong Chan Hong , Yuval Eshed , Doris Wagner

2013-02-25

TCP1, AT4G15248, SGR5, HMGB4, bZIP2, HB21, GPRI1, AT2G20880, AT2G21230, AT2G22200, AT2G22760, NAI1, LBD10, NAC038, AT2G26940, SYD, HSI2, AT2G31220, AT2G31370, MYB101, SWI3B, ETT, ERF38, E2F3, HRD, NF-YB8, TTG2, AS1, AT2G38250, CZF1, AT2G40350, AT2G42280, BRM, GBF3, WRKY46, MYB12, SWI3A, NAC046, AT3G06590, AT3G07340, EDA31, AT3G13040, LBD22, MYB26, RAP2.2, TCP4, NAC3, BSH, PTF1, BET10, HB-1, ZFN1, HB20, COL2, ZF2, AT3G21890, DMC1, MYB15, AT3G24490, ABI3, AT3G24860, TCP20, AT3G27220, TDF1, MYB121, bZIP42, TCP16, PCL1, PYE, LBD38, HEC2, AT3G50650, MYB109, AT3G57600, LBD29, HAM2, CRF6, ARF18, AT3G61950, NGA2, MYB74, TT8, NGA4, MYB102, AT4G15250, AT4G16430, AT4G17780, AT4G00870, AT4G01460, UNE12, AT4G02810, WRKY31, WRKY53, AT4G27880, MYB41, NAC074, IAA11, RR10, RSL2

11130712

Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.

Nature A Theologis , J R Ecker , C J Palm , N A Federspiel , S Kaul , O White , J Alonso , H Altafi , R Araujo , C L Bowman , S Y Brooks , E Buehler , A Chan , Q Chao , H Chen , R F Cheuk , C W Chin , M K Chung , L Conn , A B Conway , A R Conway , T H Creasy , K Dewar , P Dunn , P Etgu , T V Feldblyum , J Feng , B Fong , C Y Fujii , J E Gill , A D Goldsmith , B Haas , N F Hansen , B Hughes , L Huizar , J L Hunter , J Jenkins , C Johnson-Hopson , S Khan , E Khaykin , C J Kim , H L Koo , I Kremenetskaia , D B Kurtz , A Kwan , B Lam , S Langin-Hooper , A Lee , J M Lee , C A Lenz , J H Li , Y Li , X Lin , S X Liu , Z A Liu , J S Luros , R Maiti , A Marziali , J Militscher , M Miranda , M Nguyen , W C Nierman , B I Osborne , G Pai , J Peterson , P K Pham , M Rizzo , T Rooney , D Rowley , H Sakano , S L Salzberg , J R Schwartz , P Shinn , A M Southwick , H Sun , L J Tallon , G Tambunga , M J Toriumi , C D Town , T Utterback , S Van Aken , M Vaysberg , V S Vysotskaia , M Walker , D Wu , G Yu , C M Fraser , J C Venter , R W Davis

2000-12-14

AT1G27045, AT1G24095, AT1G12855, AT1G63295, AT1G45163, AT1G20735, AT1G51035, AT1G55207, AT1G25145, AT1G53023, AT1G29025, AT1G19396, AT1G26515, AT1G78476, AT1G71866, AT1G36922, AT1G47578, AT1G11125, AT1G02575, AT1G25150, AT1G62914, AT1G51020, AT1G03365, AT1G53025, AT1G50732, AT1G09794, AT1G64583, AT1G05675, AT1G33612, AT1G03103, AT1G03106, AT1G05085, AT1G06135, AT1G06475, DSI-1VOC, AT1G07730, AT1G07985, AT1G08125, AT1G12805, AT1G13635, AT1G16515, AT1G17285, AT1G18265, AT1G19394, AT1G19397, AT1G21395, AT1G23465, AT1G23935, AT1G24580, AT1G26798, AT1G26799, AT1G28695, AT1G30475, AT1G31835, AT1G43666, AT1G45165, AT1G48195, AT1G48325, ATHAL3B, AT1G52315, CDT1, AT1G52855, AT1G52905, AT1G53285, AT1G53785, AT1G53815, AT1G54217, AT1G54575, AT1G55475, AT1G55675, AT1G56045, AT1G56415, AT1G58242, AT1G59865, SCRL5, AT1G61097, AT1G61105, BRD4, AT1G62085, AT1G63055, AT1G64065, AT1G64235, AT1G64255, AT1G72645, AT1G76955, AT1G77885, GL22, AT1G03495, AT1G03982, AT1G04625, AT1G05894, AT1G06645, AT1G06923, YAB2, SCRL3, AT1G09157, AT1G10417, AT1G10850, AT1G12064

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