| Type | Description |
|---|---|
| Definition | HISTIDINE BIOSYNTHESIS 6B |
| Date | Results | Publications |
|---|---|---|
| 2018-05-12 11:51:00 | Results show that HISN6B of Arabidopsis thaliana Col-0 is not a defective pseudogene, but a stably silenced epiallele. Mutating HDA6, or MET1 or CMT3, erases HISN6B's silent locus identity, reanimating the gene to circumvent hisn6a lethality and hybrid incompatibility. | 28270603 |
| Type | IDs |
|---|---|
| Synonymous | F17M19.7, F17M19_7, HISTIDINE BIOSYNTHESIS 6B |
| Gene |
UniProtKB-ID:
HIS6A_ARATH,
HIS6B_ARATH,
A8MRI5_ARATH,
A0A178UPE6_ARATH,
F4IBL7_ARATH
UniprotKB:
B9DHD3,
P0DI07,
A8MRI5,
A0A178UPE6,
F4IBL7
UniParc:
UPI0000048459,
UPI00000A9C47,
UPI00018E1811,
UPI00015055CE
EMBL:
AY470011,
AY470013,
AY470023,
AY470022,
AY470003,
CACRSJ010000110,
AY470015,
AY117255,
AY470005,
AY470026,
AY470001,
AY470019,
AY470007,
AY470014,
CP002688,
AY470002,
AY470010,
AY470009,
AY470000,
AY470017,
AL360334,
AY470020,
AK317485,
LUHQ01000005,
AY470008,
AY470004,
AY470029,
AY470006,
AY470018,
AY470021,
AC021665,
CACSHJ010000087,
CP002684,
AY470012,
AY470016,
AY470025,
AY470028,
AY470027,
AY470024,
BX831512,
AY050832
EnsemblGenome:
AT5G10330,
AT1G71920
KO:
ath:AT1G71920,
ath:AT5G10330
|
| Nucleutide sequences |
EMBL-CDS:
AAR85404.1,
AAR85410.1,
AED91524.1,
AAM51330.1,
AED91523.1,
AAR85413.1,
AAR85411.1,
ANM69216.1,
ANM69219.1,
AAR85399.1,
AAR85401.1,
AAK92767.1,
ANM69217.1,
AAR85400.1,
CAB96689.1,
AAR85412.1,
AAR85406.1,
AAR85402.1,
ANM69218.1,
BAH20150.1,
AAR85407.1,
AAR85408.1,
AAR85403.1,
AAR85405.1,
AAR85409.1,
AAR85387.1,
AAR85393.1,
AAR85390.1,
AAR85388.1,
AAR85385.1,
ANM59284.1,
AAR85392.1,
AAR85398.1,
AAG52232.1,
ANM59285.1,
AAR85391.1,
AAR85395.1,
AEE35252.1,
AAR85397.1,
AAR85389.1,
AAR85394.1,
AAR85396.1,
AAR85384.1,
ANM59283.1,
AAR85386.1,
ANM69220.1,
AEE35253.1,
AED91525.1,
CAA0330191.1,
VYS66424.1,
OAO94541.1,
AEE35251.1
Gene_ORFName:
F18D22.100,
F17M19.7,
F17M19.7,
F18D22.100,
F17M19_7,
C24_LOCUS6111,
AN1_LOCUS21826,
F17M19.7,
F17M19_7
EnsemblGenome_TRS:
AT5G10330.5,
AT5G10330.1,
AT1G71920.2,
AT1G71920.4,
AT5G10330.7,
AT5G10330.4,
AT1G71920.6,
AT5G10330.6,
AT1G71920.5,
AT5G10330.2,
AT1G71920.5,
AT5G10330.2,
AT5G10330.4,
AT5G10330.7,
AT1G71920.6,
AT5G10330.6,
AT1G71920.2,
AT1G71920.4,
AT5G10330.5,
AT5G10330.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT5G10330.6,
AT5G10330.4,
AT5G10330.7,
AT1G71920.6,
AT5G10330.2,
AT1G71920.5,
AT5G10330.1,
AT5G10330.5,
AT1G71920.4,
AT1G71920.2,
AT5G10330.1,
AT5G10330.5,
AT1G71920.4,
AT1G71920.2,
AT5G10330.6,
AT5G10330.4,
AT5G10330.7,
AT1G71920.6,
AT5G10330.2,
AT1G71920.5
RefSeq:
NP_001117584.1,
NP_177337.1,
NP_001321654.1,
NP_001321653.1,
NP_001319364.1,
NP_001154467.1
|
| Others |
UniRef100:
UniRef100_B9DHD3,
UniRef100_F4IBL7
UniRef90:
UniRef90_B9DHD3
UniRef50:
UniRef50_B9DHD3
UniGene:
At.49003,
At.66855
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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Ensembl: {{protein.nucleotideEnsembl}} |
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Ensembl: {{protein.proteinEnsembl}} |
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Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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