DEP - RING/U-box superfamily protein-BMKCloudï½ç¾è¿å®¢äº

843430 DEP

基因描述

Type	Description
Definition	RING/U-box superfamily protein

研究结论

Date	Results	Publications
2011-03-14 09:56:00	DEP and ATHB20 genes are involved in ABA sensitivity during seed development and germination. [DESPIERTO]	19947978

名称对应

Type	IDs
Synonymous	DESPIERTO, F15H11.25
Gene	UniProtKB-ID: Q3ECE3_ARATH, A0A5S9WTQ5_ARATH UniprotKB: Q3ECE3, A0A5S9WTQ5 UniParc: UPI000016328A EMBL: BT029435, CACSHJ010000087, CP002684 EnsemblGenome: AT1G70910 KO: ath:AT1G70910
Nucleutide sequences	EMBL-CDS: ABK59664.1, AEE35138.1, CAA0328632.1 Gene_ORFName: F15H11.25, C24_LOCUS6017
Protein sequencees	RefSeq: NP_177247.1
Others	UniRef100: UniRef100_Q3ECE3 UniRef90: UniRef90_Q3ECE3 UniRef50: UniRef50_Q3ECE3 UniGene: At.50960

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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Pubmed编号	文献信息	发表日期	相关基因
21798944	Evidence for network evolution in an Arabidopsis interactome map. Science Arabidopsis Interactome Mapping Consortium	2011-07-29	AT2G01175, AT2G24693, AT2G42395, AT4G02725, SCRL10, AT4G23895, AT4G25315, AT4G36515, AT1G17285, AT1G30475, AT3G01435, AT3G15395, AT3G47675, AT3G54826, AT5G44565, AT5G52547, AT4G18205, ENA, ORC4, AT2G01190, AT2G01250, RPI2, MLP329, RGA1, AT2G01580, MEE11, AT2G01710, RR14, VIT1, PTR2, AT2G02050, ETL1, PP2-B5, PP2-B10, AT2G02410, AL6, CAND1, AT2G02570, PLPB, UTR1, AT2G02870, PKS1, RNS1, SPP, SK16, FT1, AT2G03430, AT2G03500, AT2G03505, AT2G03640, SPR1, AT2G03870, CR88, AT2G04100, AT2G04230, AT2G04390, IBR5, NRPB6B, AT2G04650, AT2G04690, AT2G04800, AT2G04900, AT2G05230, GRP-3, ATG8D, PAA2, OPR3, AT2G07738, MGDC, AT2G12290, AGT, NF-YB7, AT2G14835, AT2G14860, AT2G15270, ARFB1A, NRPB3, NIR1, PDV2, THY-1, BLH7, AT2G16710, UBC29, AT2G16800, PIP2;8, AT2G16880, AT2G16890, AT2G16900, AT2G16930, AT2G17150, DSK2, AT2G17350, AT2G17540, AT2G17670, AT2G17760, BZIP27, AT2G17880, AT2G17972, AT2G18110
19947978	Gene expression profiling identifies two regulatory genes controlling dormancy and ABA sensitivity in Arabidopsis seeds. Plant J. JosÃ© M Barrero , Anthony A Millar , Jayne Griffiths , Tomasz Czechowski , Wolf R Scheible , Michael Udvardi , John B Reid , John J Ross , John V Jacobsen , Frank Gubler	2010-02-01	HB20, AT1G70910
11130712	Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Nature A Theologis , J R Ecker , C J Palm , N A Federspiel , S Kaul , O White , J Alonso , H Altafi , R Araujo , C L Bowman , S Y Brooks , E Buehler , A Chan , Q Chao , H Chen , R F Cheuk , C W Chin , M K Chung , L Conn , A B Conway , A R Conway , T H Creasy , K Dewar , P Dunn , P Etgu , T V Feldblyum , J Feng , B Fong , C Y Fujii , J E Gill , A D Goldsmith , B Haas , N F Hansen , B Hughes , L Huizar , J L Hunter , J Jenkins , C Johnson-Hopson , S Khan , E Khaykin , C J Kim , H L Koo , I Kremenetskaia , D B Kurtz , A Kwan , B Lam , S Langin-Hooper , A Lee , J M Lee , C A Lenz , J H Li , Y Li , X Lin , S X Liu , Z A Liu , J S Luros , R Maiti , A Marziali , J Militscher , M Miranda , M Nguyen , W C Nierman , B I Osborne , G Pai , J Peterson , P K Pham , M Rizzo , T Rooney , D Rowley , H Sakano , S L Salzberg , J R Schwartz , P Shinn , A M Southwick , H Sun , L J Tallon , G Tambunga , M J Toriumi , C D Town , T Utterback , S Van Aken , M Vaysberg , V S Vysotskaia , M Walker , D Wu , G Yu , C M Fraser , J C Venter , R W Davis	2000-12-14	AT1G27045, AT1G24095, AT1G12855, AT1G63295, AT1G45163, AT1G20735, AT1G51035, AT1G55207, AT1G25145, AT1G53023, AT1G29025, AT1G19396, AT1G26515, AT1G78476, AT1G71866, AT1G36922, AT1G47578, AT1G11125, AT1G02575, AT1G25150, AT1G62914, AT1G51020, AT1G03365, AT1G53025, AT1G50732, AT1G09794, AT1G64583, AT1G05675, AT1G33612, AT1G03103, AT1G03106, AT1G05085, AT1G06135, AT1G06475, DSI-1VOC, AT1G07730, AT1G07985, AT1G08125, AT1G12805, AT1G13635, AT1G16515, AT1G17285, AT1G18265, AT1G19394, AT1G19397, AT1G21395, AT1G23465, AT1G23935, AT1G24580, AT1G26798, AT1G26799, AT1G28695, AT1G30475, AT1G31835, AT1G43666, AT1G45165, AT1G48195, AT1G48325, ATHAL3B, AT1G52315, CDT1, AT1G52855, AT1G52905, AT1G53285, AT1G53785, AT1G53815, AT1G54217, AT1G54575, AT1G55475, AT1G55675, AT1G56045, AT1G56415, AT1G58242, AT1G59865, SCRL5, AT1G61097, AT1G61105, BRD4, AT1G62085, AT1G63055, AT1G64065, AT1G64235, AT1G64255, AT1G72645, AT1G76955, AT1G77885, GL22, AT1G03495, AT1G03982, AT1G04625, AT1G05894, AT1G06645, AT1G06923, YAB2, SCRL3, AT1G09157, AT1G10417, AT1G10850, AT1G12064

Pubmed编号

文献信息

发表日期

相关基因

21798944

Evidence for network evolution in an Arabidopsis interactome map.

Science Arabidopsis Interactome Mapping Consortium

2011-07-29

AT2G01175, AT2G24693, AT2G42395, AT4G02725, SCRL10, AT4G23895, AT4G25315, AT4G36515, AT1G17285, AT1G30475, AT3G01435, AT3G15395, AT3G47675, AT3G54826, AT5G44565, AT5G52547, AT4G18205, ENA, ORC4, AT2G01190, AT2G01250, RPI2, MLP329, RGA1, AT2G01580, MEE11, AT2G01710, RR14, VIT1, PTR2, AT2G02050, ETL1, PP2-B5, PP2-B10, AT2G02410, AL6, CAND1, AT2G02570, PLPB, UTR1, AT2G02870, PKS1, RNS1, SPP, SK16, FT1, AT2G03430, AT2G03500, AT2G03505, AT2G03640, SPR1, AT2G03870, CR88, AT2G04100, AT2G04230, AT2G04390, IBR5, NRPB6B, AT2G04650, AT2G04690, AT2G04800, AT2G04900, AT2G05230, GRP-3, ATG8D, PAA2, OPR3, AT2G07738, MGDC, AT2G12290, AGT, NF-YB7, AT2G14835, AT2G14860, AT2G15270, ARFB1A, NRPB3, NIR1, PDV2, THY-1, BLH7, AT2G16710, UBC29, AT2G16800, PIP2;8, AT2G16880, AT2G16890, AT2G16900, AT2G16930, AT2G17150, DSK2, AT2G17350, AT2G17540, AT2G17670, AT2G17760, BZIP27, AT2G17880, AT2G17972, AT2G18110

19947978

Gene expression profiling identifies two regulatory genes controlling dormancy and ABA sensitivity in Arabidopsis seeds.

Plant J. JosÃ© M Barrero , Anthony A Millar , Jayne Griffiths , Tomasz Czechowski , Wolf R Scheible , Michael Udvardi , John B Reid , John J Ross , John V Jacobsen , Frank Gubler

2010-02-01

HB20, AT1G70910

11130712

Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.

Nature A Theologis , J R Ecker , C J Palm , N A Federspiel , S Kaul , O White , J Alonso , H Altafi , R Araujo , C L Bowman , S Y Brooks , E Buehler , A Chan , Q Chao , H Chen , R F Cheuk , C W Chin , M K Chung , L Conn , A B Conway , A R Conway , T H Creasy , K Dewar , P Dunn , P Etgu , T V Feldblyum , J Feng , B Fong , C Y Fujii , J E Gill , A D Goldsmith , B Haas , N F Hansen , B Hughes , L Huizar , J L Hunter , J Jenkins , C Johnson-Hopson , S Khan , E Khaykin , C J Kim , H L Koo , I Kremenetskaia , D B Kurtz , A Kwan , B Lam , S Langin-Hooper , A Lee , J M Lee , C A Lenz , J H Li , Y Li , X Lin , S X Liu , Z A Liu , J S Luros , R Maiti , A Marziali , J Militscher , M Miranda , M Nguyen , W C Nierman , B I Osborne , G Pai , J Peterson , P K Pham , M Rizzo , T Rooney , D Rowley , H Sakano , S L Salzberg , J R Schwartz , P Shinn , A M Southwick , H Sun , L J Tallon , G Tambunga , M J Toriumi , C D Town , T Utterback , S Van Aken , M Vaysberg , V S Vysotskaia , M Walker , D Wu , G Yu , C M Fraser , J C Venter , R W Davis

2000-12-14

AT1G27045, AT1G24095, AT1G12855, AT1G63295, AT1G45163, AT1G20735, AT1G51035, AT1G55207, AT1G25145, AT1G53023, AT1G29025, AT1G19396, AT1G26515, AT1G78476, AT1G71866, AT1G36922, AT1G47578, AT1G11125, AT1G02575, AT1G25150, AT1G62914, AT1G51020, AT1G03365, AT1G53025, AT1G50732, AT1G09794, AT1G64583, AT1G05675, AT1G33612, AT1G03103, AT1G03106, AT1G05085, AT1G06135, AT1G06475, DSI-1VOC, AT1G07730, AT1G07985, AT1G08125, AT1G12805, AT1G13635, AT1G16515, AT1G17285, AT1G18265, AT1G19394, AT1G19397, AT1G21395, AT1G23465, AT1G23935, AT1G24580, AT1G26798, AT1G26799, AT1G28695, AT1G30475, AT1G31835, AT1G43666, AT1G45165, AT1G48195, AT1G48325, ATHAL3B, AT1G52315, CDT1, AT1G52855, AT1G52905, AT1G53285, AT1G53785, AT1G53815, AT1G54217, AT1G54575, AT1G55475, AT1G55675, AT1G56045, AT1G56415, AT1G58242, AT1G59865, SCRL5, AT1G61097, AT1G61105, BRD4, AT1G62085, AT1G63055, AT1G64065, AT1G64235, AT1G64255, AT1G72645, AT1G76955, AT1G77885, GL22, AT1G03495, AT1G03982, AT1G04625, AT1G05894, AT1G06645, AT1G06923, YAB2, SCRL3, AT1G09157, AT1G10417, AT1G10850, AT1G12064

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