| Type | Description |
|---|---|
| Definition | K-box region and MADS-box transcription factor family protein |
| Date | Results | Publications |
|---|---|---|
| 2021-03-06 13:31:00 | DNA-binding properties of the MADS-domain transcription factor SEPALLATA3 and mutant variants characterized by SELEX-seq. | 33486697 |
| 2020-11-21 13:13:00 | Genome-wide binding of SEPALLATA3 and AGAMOUS complexes determined by sequential DNA-affinity purification sequencing. | 32890394 |
| 2019-10-12 13:12:00 | Leucine residues at certain key positions form a leucine-zipper structure that is essential for tetramerization of SEP3. | 29474620 |
| 2019-08-10 11:33:00 | SEPALLATA3 and AGAMOUS tetramerization is required for floral meristem determinacy. | 29562355 |
| 2019-06-08 11:49:00 | recognizes target DNA sequences by shape readout involving a conserved arginine residue in the MADS-domain | 29744943 |
| Type | IDs |
|---|---|
| Synonymous | AGAMOUS-like 9, AGL9, F3I6.19, F3I6_19, SEPALLATA3, TRANSCRIPTION FACTOR AGL9 |
| Gene |
UniProtKB-ID:
SEP3_ARATH,
A0A384L6U0_ARATH,
F4I972_ARATH,
A0A178W2I1_ARATH,
B4F7R9_ARATH
UniprotKB:
O22456,
A0A384L6U0,
F4I972,
A0A178W2I1,
B4F7R9
UniParc:
UPI000009FEC4,
UPI00001256D0,
UPI00004FD2B6
EMBL:
CACRSJ010000104,
AC002396,
CP002684,
CACSHJ010000087,
AY088272,
LUHQ01000001,
BT033157,
AK118696,
AF015552
EnsemblGenome:
AT1G24260
KO:
ath:AT1G24260
|
| Nucleutide sequences |
EMBL-CDS:
AEE30503.1,
AAC00586.1,
AAM65812.1,
AEE30502.1,
BAC43290.1,
AAB67832.1,
OAP12718.1,
VYS47079.1,
CAA0239237.1,
AEE30504.1,
OAP12719.1,
ACF75546.1
Gene_ORFName:
F3I6.19,
AN1_LOCUS2573,
C24_LOCUS2479,
F3I6.19,
F3I6_19
EnsemblGenome_TRS:
AT1G24260.1,
AT1G24260.2
|
| Protein sequencees |
EnsemblGenome_PRO:
AT1G24260.2,
AT1G24260.1
RefSeq:
NP_564214.2,
NP_850953.1,
NP_001185081.1
|
| Others |
UniRef100:
UniRef100_O22456,
UniRef100_F4I972,
UniRef100_A0A178W2I1
UniRef90:
UniRef90_O22456,
UniRef90_A0A087HQT1
UniRef50:
UniRef50_O22456
UniGene:
At.24086
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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