SHH1 - SAWADEE HOMEODOMAIN protein-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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838088 SHH1

基因描述

Type	Description
Definition	SAWADEE HOMEODOMAIN protein

研究结论

Date	Results	Publications
2014-07-08 10:41:00	DTF1 interacts with CLSY1 to assist in the recruitment of Pol IV to RdDM target loci where H3K9 methylation may be an important feature. [DTF1]	23637343
2013-07-13 13:16:00	central role for methylated H3K9 binding in SHH1 function; key residues within both lysine-binding pockets of SHH1 are required in vivo to maintain siRNA and DNA methylation levels as well as Pol-IV occupancy at RNA-directed DNA methylation targets.	23636332
2011-12-31 11:26:00	Data show that SHH1(AT1G15215), RDR2, CLASSY1, and RDM4 were co-purified with NRPD1(At1g63020), the largest subunit of Pol-IV.	21811420

名称对应

Type	IDs
Synonymous	DNA-binding transcription factor 1, DTF1, SAWADEE homeodomain homolog 1
Gene	UniProtKB-ID: SHH1_ARATH, A0A384LAK3_ARATH, A0A654EKT9_ARATH, A0A384KV25_ARATH, A0A178W1M1_ARATH, A0A178W211_ARATH UniprotKB: Q9XI47, A0A384LAK3, A0A654EKT9, A0A384KV25, A0A178W1M1, A0A178W211 UniParc: UPI00005DBF3D, UPI0007E00D10, UPI0007DFB635, UPI000000C575, UPI00000A8596 EMBL: CP002684, CACRSJ010000104, BT005197, AC007591, AK117440, LUHQ01000001 EnsemblGenome: AT1G15215 KO: ath:AT1G15215
Nucleutide sequences	EMBL-CDS: AAO50730.1, AAD39678.1, BAC42105.1, AEE29288.1, AEE29286.1, OAP12166.1, VYS46151.1, OAP12168.1, AEE29287.2, ANM59518.1 Gene_ORFName: F9L1.16, AN1_LOCUS1652 EnsemblGenome_TRS: AT1G15215.3, AT1G15215.2
Protein sequencees	EnsemblGenome_PRO: AT1G15215.2, AT1G15215.3 RefSeq: NP_001319007.1, NP_001321872.1, NP_001031048.1, NP_849666.2
Others	UniRef100: UniRef100_A0A384KV25, UniRef100_A0A384LAK3, UniRef100_Q9XI47 UniRef90: UniRef90_A0A384KV25, UniRef90_Q9XI47 UniRef50: UniRef50_Q9XI47, UniRef50_A0A384KV25 UniGene: At.26582, At.44195

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
23636332	Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1. Nature Julie A Law , Jiamu Du , Christopher J Hale , Suhua Feng , Krzysztof Krajewski , Ana Marie S Palanca , Brian D Strahl , Dinshaw J Patel , Steven E Jacobsen	2013-06-20	-
23637343	DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV. Proc. Natl. Acad. Sci. U.S.A. Heng Zhang , Ze-Yang Ma , Liang Zeng , Kaori Tanaka , Cui-Jun Zhang , Jun Ma , Ge Bai , Pengcheng Wang , Su-Wei Zhang , Zhang-Wei Liu , Tao Cai , Kai Tang , Renyi Liu , Xiaobing Shi , Xin-Jian He , Jian-Kang Zhu	2013-05-14	NRPE3B, NRPB3, NRPD2A, CHR38, RDR2, CHR42, AT1G15215, NRPD1A
22064704	An atypical component of RNA-directed DNA methylation machinery has both DNA methylation-dependent and -independent roles in locus-specific transcriptional gene silencing. Cell Res. Jun Liu , Ge Bai , Cuijun Zhang , Wei Chen , Jinxing Zhou , Suwei Zhang , Qing Chen , Xin Deng , Xin-Jian He , Jian-Kang Zhu	2011-12-01	AT1G15215
21811420	SHH1, a homeodomain protein required for DNA methylation, as well as RDR2, RDM4, and chromatin remodeling factors, associate with RNA polymerase IV. PLoS Genet. Julie A Law , Ajay A Vashisht , James A Wohlschlegel , Steven E Jacobsen	2011-07-01	NRPE3B, NRPB3, RDM4, RPB5D, NRPB9A, NRPB5, NRPD7, NRPD2A, chr40, CHR38, NRPB11, NRPB8B, RDR2, NRPE7, NRPD4, NRPB9B, CHR42, NRPB12, NRPB6A, chr31, NRPB10, AT1G15215, NRPD1A
11130712	Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Nature A Theologis , J R Ecker , C J Palm , N A Federspiel , S Kaul , O White , J Alonso , H Altafi , R Araujo , C L Bowman , S Y Brooks , E Buehler , A Chan , Q Chao , H Chen , R F Cheuk , C W Chin , M K Chung , L Conn , A B Conway , A R Conway , T H Creasy , K Dewar , P Dunn , P Etgu , T V Feldblyum , J Feng , B Fong , C Y Fujii , J E Gill , A D Goldsmith , B Haas , N F Hansen , B Hughes , L Huizar , J L Hunter , J Jenkins , C Johnson-Hopson , S Khan , E Khaykin , C J Kim , H L Koo , I Kremenetskaia , D B Kurtz , A Kwan , B Lam , S Langin-Hooper , A Lee , J M Lee , C A Lenz , J H Li , Y Li , X Lin , S X Liu , Z A Liu , J S Luros , R Maiti , A Marziali , J Militscher , M Miranda , M Nguyen , W C Nierman , B I Osborne , G Pai , J Peterson , P K Pham , M Rizzo , T Rooney , D Rowley , H Sakano , S L Salzberg , J R Schwartz , P Shinn , A M Southwick , H Sun , L J Tallon , G Tambunga , M J Toriumi , C D Town , T Utterback , S Van Aken , M Vaysberg , V S Vysotskaia , M Walker , D Wu , G Yu , C M Fraser , J C Venter , R W Davis	2000-12-14	AT1G27045, AT1G24095, AT1G12855, AT1G63295, AT1G45163, AT1G20735, AT1G51035, AT1G55207, AT1G25145, AT1G53023, AT1G29025, AT1G19396, AT1G26515, AT1G78476, AT1G71866, AT1G36922, AT1G47578, AT1G11125, AT1G02575, AT1G25150, AT1G62914, AT1G51020, AT1G03365, AT1G53025, AT1G50732, AT1G09794, AT1G64583, AT1G05675, AT1G33612, AT1G03103, AT1G03106, AT1G05085, AT1G06135, AT1G06475, DSI-1VOC, AT1G07730, AT1G07985, AT1G08125, AT1G12805, AT1G13635, AT1G16515, AT1G17285, AT1G18265, AT1G19394, AT1G19397, AT1G21395, AT1G23465, AT1G23935, AT1G24580, AT1G26798, AT1G26799, AT1G28695, AT1G30475, AT1G31835, AT1G43666, AT1G45165, AT1G48195, AT1G48325, ATHAL3B, AT1G52315, CDT1, AT1G52855, AT1G52905, AT1G53285, AT1G53785, AT1G53815, AT1G54217, AT1G54575, AT1G55475, AT1G55675, AT1G56045, AT1G56415, AT1G58242, AT1G59865, SCRL5, AT1G61097, AT1G61105, BRD4, AT1G62085, AT1G63055, AT1G64065, AT1G64235, AT1G64255, AT1G72645, AT1G76955, AT1G77885, GL22, AT1G03495, AT1G03982, AT1G04625, AT1G05894, AT1G06645, AT1G06923, YAB2, SCRL3, AT1G09157, AT1G10417, AT1G10850, AT1G12064

研究热度

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