| Type | Description |
|---|---|
| Definition | non-photochemical quenching 1 |
| Date | Results | Publications |
|---|---|---|
| 2016-01-22 15:59:00 | Under a gradually increasing light intensity, where pNPQ is allowed to develop, it is only the amplitude of pNPQ which is the determining factor for protection. Npq1 and npq4 mutants are equally protected against photodamage, but less protected than WT plants.[Npq1] | 25429003 |
| 2015-05-23 11:27:00 | importance of disulfide bonds for violaxanthin de-epoxidase | 25747136 |
| 2014-12-20 10:16:00 | eIFiso4G expression is required to regulate violaxanthin de-epoxidase expression and to support photosynthetic activity. | 24706761 |
| 2012-09-15 10:23:00 | Four amino acid residues (D98, D117, H168 and D206) are critical for pH-dependent activation of violaxanthin de-epoxidase from Arabidopsis thaliana. | 22558195 |
| 2010-01-21 00:00:00 | Data determined the structures of the central lipocalin domain of VDE (VDEcd). At neutral pH, VDEcd is monomeric with its active site occluded within a lipocalin barrel. Upon acidification, the barrel opens up and the enzyme appears as a dimer. | 19638474 |
| Type | IDs |
|---|---|
| Synonymous | ARABIDOPSIS VIOLAXANTHIN DE-EPOXIDASE 1, AVDE1, F22O13.3, F22O13_3, VIOLAXANTHIN DE-EPOXIDASE PRECURSOR, non-photochemical quenching 1 |
| Gene |
UniProtKB-ID:
VDE_ARATH,
A0A384K8V4_ARATH,
B9DGR5_ARATH
UniprotKB:
Q39249,
A0A384K8V4,
B9DGR5
UniParc:
UPI0000048200
EMBL:
CP002684,
AC003981,
U44133,
AK317253,
AY063067,
LUHQ01000001,
AF370251,
AC006932
EnsemblGenome:
AT1G08550
KO:
ath:AT1G08550
|
| Nucleutide sequences |
EMBL-CDS:
ANM58901.1,
AAF22898.1,
AAK44066.1,
AAL34241.1,
AAF99753.1,
AEE28305.1,
AAC50032.1,
AEE28304.1,
OAP18413.1,
BAH19932.1
Gene_ORFName:
F22O13.3,
T27G7.23
EnsemblGenome_TRS:
AT1G08550.3,
AT1G08550.2,
AT1G08550.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT1G08550.3,
AT1G08550.2,
AT1G08550.1
RefSeq:
NP_172331.1,
NP_001321301.1,
NP_001031000.1
|
| Others |
UniRef100:
UniRef100_Q39249
UniRef90:
UniRef90_Q39249
UniRef50:
UniRef50_Q39249
UniGene:
At.20930
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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