SDE3 - P-loop containing nucleoside triphosphate hydrolases superfamily protein-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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837047 SDE3

基因描述

Type	Description
Definition	P-loop containing nucleoside triphosphate hydrolases superfamily protein

研究结论

Date	Results	Publications
2013-01-26 10:21:00	SDE3 is present with the PTGS effectors AGO1 and AGO2 in protein complexes with a GW-repeat-containing C-terminal domain. Contribution of RNA-helicase activity and role for AGO binding in SDE3 action, which occurs downstream of RDR6	22940249

名称对应

Type	IDs
Synonymous	SILENCING DEFECTIVE, T25N20.11, T25N20_11
Gene	UniProtKB-ID: SDE3_ARATH, A0A654EHN2_ARATH, A0A1P8AMM9_ARATH UniprotKB: Q8GYD9, A0A654EHN2, A0A1P8AMM9 UniParc: UPI0008484A80, UPI00000ADDF2 EMBL: CP002684, CACRSJ010000104, AC005106, AF339908, AK117698 EnsemblGenome: AT1G05460 KO: ath:AT1G05460
Nucleutide sequences	EMBL-CDS: AAF79736.1, AEE27843.1, AAK40099.1, BAC42350.1, VYS45091.1, ANM57893.1 Gene_ORFName: T25N20.11, T25N20.26, AN1_LOCUS596, T25N20_11, T25N20.11 EnsemblGenome_TRS: AT1G05460.1
Protein sequencees	EnsemblGenome_PRO: AT1G05460.1 RefSeq: NP_172037.1, NP_001320371.1
Others	UniRef100: UniRef100_A0A1P8AMM9, UniRef100_Q8GYD9 UniRef90: UniRef90_Q8GYD9 UniRef50: UniRef50_Q8GYD9 UniGene: At.15329, At.42398

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
26320228	The RING E3 Ligase KEEP ON GOING Modulates JASMONATE ZIM-DOMAIN12 Stability. Plant Physiol. Laurens Pauwels , AndrÃ©s Ritter , Jonas Goossens , Astrid Nagels Durand , Hongxia Liu , Yangnan Gu , Jan Geerinck , Marta Boter , Robin Vanden Bossche , Rebecca De Clercq , Jelle Van Leene , Kris Gevaert , Geert De Jaeger , Roberto Solano , Sophia Stone , Roger W Innes , Judy Callis , Alain Goossens	2015-10-01	COI1, TDX, JAZ11, emb1624, CUL1, AT4G17880, NINJA, CYS1, JAZ10, KEG, JAZ12, AT5G21326, ASK2, SDE3, JAZ5, JAZ1, MYC2, JAZ4, TIFY7, JAZ6, TIFY10B, SKP1
22940249	Ago hook and RNA helicase motifs underpin dual roles for SDE3 in antiviral defense and silencing of nonconserved intergenic regions. Mol. Cell Damien Garcia , Shahinez Garcia , Dominique Pontier , Antonin Marchais , Jean Pierre Renou , Thierry Lagrange , Olivier Voinnet	2012-10-12	AGO4, SDE3, AGO1
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
11296239	SDE3 encodes an RNA helicase required for post-transcriptional gene silencing in Arabidopsis. EMBO J. T Dalmay , R Horsefield , T H Braunstein , D C Baulcombe	2001-04-17	Mapk7, SDE3
11130712	Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Nature A Theologis , J R Ecker , C J Palm , N A Federspiel , S Kaul , O White , J Alonso , H Altafi , R Araujo , C L Bowman , S Y Brooks , E Buehler , A Chan , Q Chao , H Chen , R F Cheuk , C W Chin , M K Chung , L Conn , A B Conway , A R Conway , T H Creasy , K Dewar , P Dunn , P Etgu , T V Feldblyum , J Feng , B Fong , C Y Fujii , J E Gill , A D Goldsmith , B Haas , N F Hansen , B Hughes , L Huizar , J L Hunter , J Jenkins , C Johnson-Hopson , S Khan , E Khaykin , C J Kim , H L Koo , I Kremenetskaia , D B Kurtz , A Kwan , B Lam , S Langin-Hooper , A Lee , J M Lee , C A Lenz , J H Li , Y Li , X Lin , S X Liu , Z A Liu , J S Luros , R Maiti , A Marziali , J Militscher , M Miranda , M Nguyen , W C Nierman , B I Osborne , G Pai , J Peterson , P K Pham , M Rizzo , T Rooney , D Rowley , H Sakano , S L Salzberg , J R Schwartz , P Shinn , A M Southwick , H Sun , L J Tallon , G Tambunga , M J Toriumi , C D Town , T Utterback , S Van Aken , M Vaysberg , V S Vysotskaia , M Walker , D Wu , G Yu , C M Fraser , J C Venter , R W Davis	2000-12-14	AT1G27045, AT1G24095, AT1G12855, AT1G63295, AT1G45163, AT1G20735, AT1G51035, AT1G55207, AT1G25145, AT1G53023, AT1G29025, AT1G19396, AT1G26515, AT1G78476, AT1G71866, AT1G36922, AT1G47578, AT1G11125, AT1G02575, AT1G25150, AT1G62914, AT1G51020, AT1G03365, AT1G53025, AT1G50732, AT1G09794, AT1G64583, AT1G05675, AT1G33612, AT1G03103, AT1G03106, AT1G05085, AT1G06135, AT1G06475, DSI-1VOC, AT1G07730, AT1G07985, AT1G08125, AT1G12805, AT1G13635, AT1G16515, AT1G17285, AT1G18265, AT1G19394, AT1G19397, AT1G21395, AT1G23465, AT1G23935, AT1G24580, AT1G26798, AT1G26799, AT1G28695, AT1G30475, AT1G31835, AT1G43666, AT1G45165, AT1G48195, AT1G48325, ATHAL3B, AT1G52315, CDT1, AT1G52855, AT1G52905, AT1G53285, AT1G53785, AT1G53815, AT1G54217, AT1G54575, AT1G55475, AT1G55675, AT1G56045, AT1G56415, AT1G58242, AT1G59865, SCRL5, AT1G61097, AT1G61105, BRD4, AT1G62085, AT1G63055, AT1G64065, AT1G64235, AT1G64255, AT1G72645, AT1G76955, AT1G77885, GL22, AT1G03495, AT1G03982, AT1G04625, AT1G05894, AT1G06645, AT1G06923, YAB2, SCRL3, AT1G09157, AT1G10417, AT1G10850, AT1G12064

研究热度

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