SC35 - serine/arginine-rich splicing factor-like protein, putative-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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836541 SC35

基因描述

Type	Description
Definition	serine/arginine-rich splicing factor-like protein, putative

研究结论

Date	Results	Publications
2017-06-10 11:39:00	loss of the functions of SC35 and SC35-like (SCL) proteins cause pleiotropic changes in plant morphology and development, including serrated leaves, late flowering, shorter roots and abnormal silique phyllotaxy; SC35 and SCL proteins play roles in the pre-mRNA splicing	28273088

名称对应

Type	IDs
Synonymous	ARABIDOPSIS THALIANA ORTHOLOG OF HUMAN SPLICING FACTOR SC35, ATSC35, At-SC35, MSJ1.4, MSJ1_4, ortholog of human splicing factor SC35
Gene	UniProtKB-ID: SC35_ARATH, A0A178U800_ARATH UniprotKB: Q9FMG4, A0A178U800 UniParc: UPI00000ABEF5 EMBL: AY127004, AY143851, CP002688, CACSHJ010000096, AB008268, CACRSJ010000110, AY122917, AY063890, LUHQ01000005 EnsemblGenome: AT5G64200 KO: ath:AT5G64200
Nucleutide sequences	EMBL-CDS: AED97854.1, AAL36246.1, AAM83231.1, AAM67450.1, AED97853.1, BAB09851.1, AAN28790.1, OAO89770.1, CAA0411902.1, VYS71358.1 Gene_ORFName: MSJ1.4, C24_LOCUS26556, AN1_LOCUS26735 EnsemblGenome_TRS: AT5G64200.2, AT5G64200.1
Protein sequencees	EnsemblGenome_PRO: AT5G64200.2, AT5G64200.1 RefSeq: NP_201225.1, NP_851261.1
Others	UniRef100: UniRef100_Q9FMG4 UniRef90: UniRef90_Q9FMG4 UniRef50: UniRef50_Q9FMG4 UniGene: At.23698, At.49215

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
32344669	Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Biomolecules Marcel Bach-Pages , Felix Homma , Jiorgos Kourelis , Farnusch Kaschani , Shabaz Mohammed , Markus Kaiser , Renier A L van der Hoorn , Alfredo Castello , Gail M Preston	2020-04-24	-
28273088	Depletion of Arabidopsis SC35 and SC35-like serine/arginine-rich proteins affects the transcription and splicing of a subset of genes. PLoS Genet. Qingqing Yan , Xi Xia , Zhenfei Sun , Yuda Fang	2017-03-01	-
27729395	In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings. Plant Cell Marlene Reichel , Yalin Liao , Mandy Rettel , Chikako Ragan , Maurits Evers , Anne-Marie Alleaume , Rastislav Horos , Matthias W Hentze , Thomas Preiss , Anthony A Millar	2016-10-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
18674533	Co-localisation studies of Arabidopsis SR splicing factors reveal different types of speckles in plant cell nuclei. Exp. Cell Res. Zdravko J LorkoviÄ , Julia Hilscher , Andrea Barta	2008-10-15	RSZ33, SCL30A, SCL30, SRZ-22, SCL28, SC35, ATSRP30, RSZP21, SR1, SR33
18433157	Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. J. Proteome Res. Sergio de la Fuente van Bentem , Dorothea Anrather , Ilse Dohnal , Elisabeth Roitinger , Edina Csaszar , Jos Joore , Joshua Buijnink , Alessandro Carreri , Celine Forzani , Zdravko J Lorkovic , Andrea Barta , David Lecourieux , Andreas Verhounig , Claudia Jonak , Heribert Hirt	2008-06-01	AT2G01190, GAD4, AT2G03140, emb1579, AT2G07360, CPK6, AT2G17700, HA1, SAE2, AT2G25430, SE, BSL3, AT2G27710, AT2G27720, SYD, AT2G32730, AT2G33620, AGD7, AT2G37790, FAC1, PHT1;4, PGP6, PPC2, PVA12, GOS12, BRM, ACBP4, ATSK12, IMPA-1, AT3G08590, TH9, AT3G09200, SPY, RBR1, AT3G01160, AT3G13235, VCS, EIF4A1, AT3G13990, SRF7, PPC3, AT3G16060, AT3G16460, AT3G17750, AT3G17850, MS2, AT3G03570, AT3G18230, AT3G18240, VPS9A, DDL, AT3G22850, AT3G23310, BAM1, AT3G24080, AT3G26560, AT3G26780, GC6, AT3G28500, AT3G29360, AT3G42628, AT3G44590, CDC2, MAPR3, BBC1, SNRK2.2, MUR1, SRPK4, AT3G53230, AGD6, AT3G54760, AT3G55020, PGP20, SCL30, EIF3C, NAP57, BS14A, VAP, AT3G61160, CPK27, GRF1, AT4G11270, SAY1, AT4G11860, AT4G12770, NIG, AMT1;1, AT4G14350, TUA6, PPDK, IMPA-2, SPK1, FIP2, AT4G17520, TOC159, AT4G00810, SK32, AT4G23040, PGI1
16497658	AtCyp59 is a multidomain cyclophilin from Arabidopsis thaliana that interacts with SR proteins and the C-terminal domain of the RNA polymerase II. RNA Monika Gullerova , Andrea Barta , Zdravko J Lorkovic	2006-04-01	RSZ33, SCL30A, SCL30, RSP31, RSP35, NRPB1, SCL28, SC35, ATSRP30, RSZP21, SR1, CYP59, SR33
16807317	Phosphoproteomics reveals extensive in vivo phosphorylation of Arabidopsis proteins involved in RNA metabolism. Nucleic Acids Res. Sergio de la Fuente van Bentem , Dorothea Anrather , Elisabeth Roitinger , Armin Djamei , Thomas Hufnagl , Andrea Barta , Edina Csaszar , Ilse Dohnal , David Lecourieux , Heribert Hirt	2006-01-01	AT2G24590, AT2G29210, RSZ33, SCL30A, SRp34a, SRPK4, RSZ32, SCL30, RSP31, AT3G63400, RSP35, SRZ-22, BTR1L, AT5G51300, ATRSP41, SC35, AT1G07350, SR45, PRP39, ESP3, SR33
15987817	Evolutionary conservation of minor U12-type spliceosome between plants and humans. RNA Zdravko J Lorkovic , Reinhard Lehner , Christina Forstner , Andrea Barta	2005-07-01	-
15133128	Use of fluorescent protein tags to study nuclear organization of the spliceosomal machinery in transiently transformed living plant cells. Mol. Biol. Cell Zdravko J LorkoviÄ , Julia Hilscher , Andrea Barta	2004-07-01	-

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