| Type | Description |
|---|---|
| Definition | histone deacetylase 6 |
| Date | Results | Publications |
|---|---|---|
| 2021-02-06 13:49:00 | SWI3B and HDA6 interact and are required for transposon silencing in Arabidopsis. | 31883159 |
| 2020-05-09 12:19:00 | XPO1A directly interacts with histone deacetylase HDA6 in vivo and that the xpo1a mutation causes increased nuclear retention of HDA6 protein | 30697937 |
| 2020-02-22 12:53:00 | Our analyses revealed particular lysine sites at histone sequences targeted by the HDA6 enzyme, and by TSA- and NaB-sensitive HDAs. Compared with plants exposed to drugs, more dramatic changes in the overall profiles of histone post-translational modifications were identified in hda6 mutants. However, loss of HDA6 was not sufficient by itself to induce hyperacetylation to the maximum degree, implying complementary activit | 31615119 |
| 2019-12-07 10:41:00 | HDA6-GFP was expressed in the whole root and localized at the nucleus in Arabidopsis, rice, and cassava. Remarkably, HDA6-GFP clearly formed speckles that were actively colocalized with chromocenters in Arabidopsis root meristem. In contrast, such speckles were unlikely to be formed in rice or cassava. | 31338715 |
| 2019-09-14 12:33:00 | HDA6 and HDA9 coordinately control the elongation of silique valve cells through regulating the expression of auxin-related genes in silique tips. | 30527808 |
| Type | IDs |
|---|---|
| Synonymous | ATHDA6, AXE1, HISTONE DEACETYLASE 6, MDC12.7, MDC12_7, RNA-MEDIATED TRANSCRIPTIONAL SILENCING 1, RPD3B, RTS1, SIL1, histone deacetylase 6 |
| Gene |
UniProtKB-ID:
HDA6_ARATH,
B1PXB9_ARATH,
A0A384KCB8_ARATH
UniprotKB:
Q9FML2,
B1PXB9,
A0A384KCB8
UniParc:
UPI00000AC57F
EMBL:
EU502910,
LUHQ01000005,
AB008265,
AF195548,
CP002688,
AY088314,
EU502909,
CACRSJ010000110,
AY072201,
CACSHJ010000096,
AY142660
EnsemblGenome:
AT5G63110
KO:
ath:AT5G63110
|
| Nucleutide sequences |
EMBL-CDS:
AAN13198.1,
AAG28475.1,
AAM65853.1,
AED97705.1,
AAL60022.1,
BAB10553.1,
ACA97992.1,
ACA97993.1,
CAA0411665.1,
VYS71247.1,
OAO96110.1
Gene_ORFName:
MDC12.7,
AN1_LOCUS26625,
C24_LOCUS26447
EnsemblGenome_TRS:
AT5G63110.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT5G63110.1
RefSeq:
NP_201116.1
|
| Others |
UniRef100:
UniRef100_Q9FML2
UniRef90:
UniRef90_Q9FML2
UniRef50:
UniRef50_Q9FML2
UniGene:
At.8834
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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