| Type | Description |
|---|---|
| Definition | methyl-CPG-binding domain 6 |
| Date | Results | Publications |
|---|---|---|
| 2017-03-18 12:05:00 | Our results indicate that AtMBD6 is involved in RNA-mediated gene silencing and it binds to RNA binding proteins like AtRPS2C, AtAGO4 and AtNTF2. AtMBD6 also interacts with histone deacetylase AtHDA6 that might have a role in chromatin condensation at the targets of RdDM | 28229965 |
| Type | IDs |
|---|---|
| Synonymous | ATMBD6, F2O15.4, F2O15_4, methyl-CPG-binding domain 6 |
| Gene |
UniProtKB-ID:
MBD6_ARATH,
A0A5S9YFF5_ARATH
UniprotKB:
Q9LTJ1,
A0A5S9YFF5
UniParc:
UPI000000C3DA
EMBL:
CP002688,
AK227565,
AB025604,
CACSHJ010000096,
BT004606
EnsemblGenome:
AT5G59380
KO:
ath:AT5G59380
|
| Nucleutide sequences |
EMBL-CDS:
BAA97474.1,
AAO42852.1,
AED97178.1,
BAE99559.1,
CAA0410848.1
Gene_ORFName:
F2O15.4,
C24_LOCUS26062
EnsemblGenome_TRS:
AT5G59380.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT5G59380.1
RefSeq:
NP_200746.1
|
| Others |
UniRef100:
UniRef100_Q9LTJ1
UniRef90:
UniRef90_Q9LTJ1
UniRef50:
UniRef50_Q9LTJ1
UniGene:
At.29228
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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