RCF3 - RNA-binding KH domain-containing protein-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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835386 RCF3

基因描述

Type	Description
Definition	RNA-binding KH domain-containing protein

研究结论

Date	Results	Publications
2016-03-05 11:06:00	KH domain protein RCF3 is a tissue-biased regulator of the plant miRNA biogenesis cofactor HYL1.	26512101
2016-01-16 11:57:00	HIGH OSMOTIC STRESS GENE EXPRESSION 5 (HOS5)affects the biogenesis of a subset of miRNA.	26227967
2014-07-09 14:37:00	a KH domain-containing putative RNA-binding protein RCF3 is an important upstream regulator for heat stress-responsive gene expression and thermotolerance in Arabidopsis [RCF3]	23087326
2014-07-09 14:11:00	In fry2 mutants, HOS5 failed to be localized in nuclear speckles but was found mainly in the nucleoplasm. hos5 mutants were impaired in mRNA export and accumulated a significant amount of mRNA in the nuclei, particularly under salt stress conditions. [HOS5]	24146632
2014-07-03 08:59:00	K-homology domain-containing protein named SHINY1 (SHI1) interacts with CPL1 to modulate gene expression. [SHI1] [SHINY1]	23874224

名称对应

Type	IDs
Synonymous	MNB8.12, MNB8_12, SHI1, SHINY 1, regulator of CBF gene expression 3
Gene	UniProtKB-ID: RCF3_ARATH, A0A1P8BB62_ARATH, F4KIZ8_ARATH, A0A178UIE3_ARATH UniprotKB: Q8W4B1, A0A1P8BB62, F4KIZ8, A0A178UIE3 UniParc: UPI00084878EE, UPI0001E93159, UPI00000A3EA8 EMBL: AY062686, CP002688, LUHQ01000005, BT008402, AB018116 EnsemblGenome: AT5G53060 KO: ath:AT5G53060
Nucleutide sequences	EMBL-CDS: AAL32764.1, AED96298.1, BAA97146.1, AAP37761.1, ANM68831.1, AED96299.1, OAO93573.1 Gene_ORFName: MNB8.12 EnsemblGenome_TRS: AT5G53060.1
Protein sequencees	EnsemblGenome_PRO: AT5G53060.1 RefSeq: NP_001190526.1, NP_200118.3, NP_001330551.1
Others	UniRef100: UniRef100_F4KIZ8, UniRef100_Q8W4B1 UniRef90: UniRef90_Q8W4B1, UniRef90_F4KIZ8 UniRef50: UniRef50_Q8W4B1, UniRef50_F4KIZ8 UniGene: At.27262

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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全选

Pubmed编号	文献信息	发表日期	相关基因
26512101	KH domain protein RCF3 is a tissue-biased regulator of the plant miRNA biogenesis cofactor HYL1. Proc. Natl. Acad. Sci. U.S.A. Patricia Karlsson , Michael Danger Christie , Danelle K Seymour , Huan Wang , Xi Wang , JÃ¶rg Hagmann , Franceli Kulcheski , Pablo AndrÃ©s Manavella	2015-11-10	-
26227967	The RNA-binding protein HOS5 and serine/arginine-rich proteins RS40 and RS41 participate in miRNA biogenesis in Arabidopsis. Nucleic Acids Res. Tao Chen , Peng Cui , Liming Xiong	2015-09-30	RSP35, ATRSP41, AT5G53060, HYL1
25985302	The Arabidopsis KH-Domain RNA-Binding Protein ESR1 Functions in Components of Jasmonate Signalling, Unlinking Growth Restraint and Resistance to Stress. PLoS ONE Louise F Thatcher , Lars G Kamphuis , James K Hane , Luis OÃ±ate-SÃ¡nchez , Karam B Singh	2015-01-01	AT5G53060, ESR1
23087326	A KH domain-containing putative RNA-binding protein is critical for heat stress-responsive gene regulation and thermotolerance in Arabidopsis. Mol Plant Qingmei Guan , Changlong Wen , Haitao Zeng , Jianhua Zhu	2013-03-01	AT5G53060
23874224	The arabidopsis RNA binding protein with K homology motifs, SHINY1, interacts with the C-terminal domain phosphatase-like 1 (CPL1) to repress stress-inducible gene expression. PLoS Genet. Jiafu Jiang , Bangshing Wang , Yun Shen , Hui Wang , Qing Feng , Huazhong Shi	2013-01-01	CPL1, AT5G53060
24303021	Regulation of abiotic stress signalling by Arabidopsis C-terminal domain phosphatase-like 1 requires interaction with a k-homology domain-containing protein. PLoS One In Sil Jeong , Akihito Fukudome , Emre Aksoy , Woo Young Bang , Sewon Kim , Qingmei Guan , Jeong Dong Bahk , Kimberly A May , William K Russell , Jianhua Zhu , Hisashi Koiwa	2013-01-01	-
24146632	A KH-domain RNA-binding protein interacts with FIERY2/CTD phosphatase-like 1 and splicing factors and is important for pre-mRNA splicing in Arabidopsis. PLoS Genet. Tao Chen , Peng Cui , Hao Chen , Shahjahan Ali , Shoudong Zhang , Liming Xiong	2013-01-01	CPL1, AT5G53060
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
21798944	Evidence for network evolution in an Arabidopsis interactome map. Science Arabidopsis Interactome Mapping Consortium	2011-07-29	AT2G01175, AT2G24693, AT2G42395, AT4G02725, SCRL10, AT4G23895, AT4G25315, AT4G36515, AT1G17285, AT1G30475, AT3G01435, AT3G15395, AT3G47675, AT3G54826, AT5G44565, AT5G52547, AT4G18205, ENA, ORC4, AT2G01190, AT2G01250, RPI2, MLP329, RGA1, AT2G01580, MEE11, AT2G01710, RR14, VIT1, PTR2, AT2G02050, ETL1, PP2-B5, PP2-B10, AT2G02410, AL6, CAND1, AT2G02570, PLPB, UTR1, AT2G02870, PKS1, RNS1, SPP, SK16, FT1, AT2G03430, AT2G03500, AT2G03505, AT2G03640, SPR1, AT2G03870, CR88, AT2G04100, AT2G04230, AT2G04390, IBR5, NRPB6B, AT2G04650, AT2G04690, AT2G04800, AT2G04900, AT2G05230, GRP-3, ATG8D, PAA2, OPR3, AT2G07738, MGDC, AT2G12290, AGT, NF-YB7, AT2G14835, AT2G14860, AT2G15270, ARFB1A, NRPB3, NIR1, PDV2, THY-1, BLH7, AT2G16710, UBC29, AT2G16800, PIP2;8, AT2G16880, AT2G16890, AT2G16900, AT2G16930, AT2G17150, DSK2, AT2G17350, AT2G17540, AT2G17670, AT2G17760, BZIP27, AT2G17880, AT2G17972, AT2G18110
11130714	Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Nature S Tabata , T Kaneko , Y Nakamura , H Kotani , T Kato , E Asamizu , N Miyajima , S Sasamoto , T Kimura , T Hosouchi , K Kawashima , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , K Naruo , S Okumura , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Sato , M de la Bastide , E Huang , L Spiegel , L Gnoj , A O'Shaughnessy , R Preston , K Habermann , J Murray , D Johnson , T Rohlfing , J Nelson , T Stoneking , K Pepin , J Spieth , M Sekhon , J Armstrong , M Becker , E Belter , H Cordum , M Cordes , L Courtney , W Courtney , M Dante , H Du , J Edwards , J Fryman , B Haakensen , E Lamar , P Latreille , S Leonard , R Meyer , E Mulvaney , P Ozersky , A Riley , C Strowmatt , C Wagner-McPherson , A Wollam , M Yoakum , M Bell , N Dedhia , L Parnell , R Shah , M Rodriguez , L H See , D Vil , J Baker , K Kirchoff , K Toth , L King , A Bahret , B Miller , M Marra , R Martienssen , W R McCombie , R K Wilson , G Murphy , I Bancroft , G Volckaert , R Wambutt , A DÃ¼sterhÃ¶ft , W Stiekema , T Pohl , K D Entian , N Terryn , N Hartley , E Bent , S Johnson , S A Langham , B McCullagh , J Robben , B Grymonprez , W Zimmermann , U Ramsperger , H Wedler , K Balke , E Wedler , S Peters , M van Staveren , W Dirkse , P Mooijman , R K Lankhorst , T Weitzenegger , G Bothe , M Rose , J Hauf , S Berneiser , S Hempel , M Feldpausch , S Lamberth , R Villarroel , J Gielen , W Ardiles , O Bents , K Lemcke , G Kolesov , K Mayer , S Rudd , H Schoof , C Schueller , P Zaccaria , H W Mewes , M Bevan , P Fransz , Kazusa DNA Research Institute , Cold Spring Harbor and Washington University in St Louis Sequencing Consortium , European Union Arabidopsis Genome Sequencing Consortium	2000-12-14	AT5G10605, AT5G08305, AT5G19025, AT5G67265, AT5G53635, AT5G60335, AT5G62865, AT5G28442, AT5G04045, AT5G07225, MIR162A, AT5G09225, AT5G10625, AT5G10745, AT5G18475, AT5G18525, AT5G18636, AT5G20045, AGP41, AT5G26805, AT5G28237, AT5G35732, AT5G35737, AT5G37478, AT5G42235, AT5G42825, AT5G43185, AT5G44005, AT5G44565, AT5G45275, AT5G45660, AT5G48205, AT5G48335, HINT3, AT5G48657, AT5G49015, AT5G52547, AT5G55565, AT5G57565, AT5G66005, AT5G67245, AT5G08055, AT5G06043, AT5G01881, AT5G19172, AT5G19175, AT5G16486, AT5G03795, AT5G03406, AT5G22791, AT5G16453, AT5G23212, AT5G19473, AT5G19485, AT5G19315, AT5G08505, AT5G07740, AT5G23035, AT5G18403, AT5G18407, AT5G08315, AT5G04347, AT5G24318, AT5G26622, AT5G27495, AT5G28288, AT5G32460, AT5G32619, AT5G35050, AT5G35195, AT5G35660, AT5G35926, AT5G36001, AT5G36228, AT5G36300, AT5G37473, AT5G37474, LCR58, AT5G38344, SPH8, AT5G39365, AT5G40405, AT5G42146, AT5G42223, AT5G42232, LCR57, LCR28, AT5G43285, AT5G43401, AT5G43513, AT5G43518, AT5G43525, AT5G44973, SCRL27, AT5G46871, AT5G46873, AT5G46874, AT5G46877, LCR20

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