AT5G50150 - NEP-interacting protein, putative (DUF239)-BMKCloudï½ç¾è¿å®¢äº

835080 AT5G50150

基因描述

Type	Description
Definition	NEP-interacting protein, putative (DUF239)

研究结论

Date	Results	Publications
2018-08-11 10:15:00	An uncharacterized gene, LOTR1, is essential for Casparian strip formation in Arabidopsis thaliana. The lotr1 mutants display altered localization of CASP1, an essential protein for Casparian strip formation, disrupted Casparian strips, ectopic suberization of endodermal cells, and low accumulation of shoot calcium (Ca).	28238658

名称对应

Type	IDs
Synonymous	MPF21.18, MPF21_18
Gene	UniProtKB-ID: Q9FG96_ARATH UniprotKB: Q9FG96 UniParc: UPI000009FA6A EMBL: AB024031, AB026650, CP002688, AF446872, AY052196 EnsemblGenome: AT5G50150 KO: ath:AT5G50150
Nucleutide sequences	EMBL-CDS: BAB10301.1, AED95904.1, AAL38605.1, AAK97667.1
Protein sequencees	RefSeq: NP_199826.1
Others	UniRef100: UniRef100_Q9FG96 UniRef90: UniRef90_V4LMF4 UniRef50: UniRef50_A0A6J1G1Q6 UniGene: At.26440

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

暂无数据

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全选

Pubmed编号	文献信息	发表日期	相关基因
28238658	Role of LOTR1 in Nutrient Transport through Organization of Spatial Distribution of Root Endodermal Barriers. Curr Biol Baohai Li , Takehiro Kamiya , Lothar Kalmbach , Mutsumi Yamagami , Katsushi Yamaguchi , Shuji Shigenobu , Shinichiro Sawa , John M C Danku , David E Salt , Niko Geldner , Toru Fujiwara	2017-03-06	-
20855607	Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Proc. Natl. Acad. Sci. U.S.A. Nabil Elrouby , George Coupland	2010-10-05	QPT, AT2G01690, AT2G07707, MCM9, AT2G17150, AT2G17410, HA1, AT2G20560, SYTA, SAE2, MGP1, AT2G22100, AT2G22360, AT2G25510, AT2G26270, PDR4, EIL1, LOG1, AT2G30990, AT2G32600, AT2G33600, AT2G35390, UBQ7, LOS2, AT2G38580, CYT1, DPE2, GPDHC1, AT2G41840, AT2G43210, AT2G44060, AT3G05670, AT3G06450, AT3G06660, SCN1, AAC1, AT3G09440, AT3G09500, EIF3G1, BIG, ITN1, HSP70, AT3G13225, ATBRXL2, PAP1, AT3G16670, MTO3, AT3G17900, LBD41, KIN10, VRN1, PSBTN, AT3G22970, HCF101, ICE1, PTAC16, AT3G47370, AT3G47836, AT3G47890, BCS1, LTA3, UBQ1, PIP2A, AT3G53870, AT3G54200, PMR6, PAT2, AT3G55520, SCE1, AT3G58050, AT3G61380, ATERDJ3B, RRF, AT4G08900, AT4G12780, ADA2B, G2484-1, AT4G18670, CMT2, TOC159, AT4G00870, AT4G23470, SGT1A, AT4G23670, AT4G23730, cpHsc70-1, CHLM, FIB2, AT4G25730, SUMO1, PPI1, AT4G27980, RPT2a, emb2726, HXK1, SNF7.1, VEL1, AT4G31210, AT4G34140
11130714	Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Nature S Tabata , T Kaneko , Y Nakamura , H Kotani , T Kato , E Asamizu , N Miyajima , S Sasamoto , T Kimura , T Hosouchi , K Kawashima , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , K Naruo , S Okumura , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Sato , M de la Bastide , E Huang , L Spiegel , L Gnoj , A O'Shaughnessy , R Preston , K Habermann , J Murray , D Johnson , T Rohlfing , J Nelson , T Stoneking , K Pepin , J Spieth , M Sekhon , J Armstrong , M Becker , E Belter , H Cordum , M Cordes , L Courtney , W Courtney , M Dante , H Du , J Edwards , J Fryman , B Haakensen , E Lamar , P Latreille , S Leonard , R Meyer , E Mulvaney , P Ozersky , A Riley , C Strowmatt , C Wagner-McPherson , A Wollam , M Yoakum , M Bell , N Dedhia , L Parnell , R Shah , M Rodriguez , L H See , D Vil , J Baker , K Kirchoff , K Toth , L King , A Bahret , B Miller , M Marra , R Martienssen , W R McCombie , R K Wilson , G Murphy , I Bancroft , G Volckaert , R Wambutt , A DÃ¼sterhÃ¶ft , W Stiekema , T Pohl , K D Entian , N Terryn , N Hartley , E Bent , S Johnson , S A Langham , B McCullagh , J Robben , B Grymonprez , W Zimmermann , U Ramsperger , H Wedler , K Balke , E Wedler , S Peters , M van Staveren , W Dirkse , P Mooijman , R K Lankhorst , T Weitzenegger , G Bothe , M Rose , J Hauf , S Berneiser , S Hempel , M Feldpausch , S Lamberth , R Villarroel , J Gielen , W Ardiles , O Bents , K Lemcke , G Kolesov , K Mayer , S Rudd , H Schoof , C Schueller , P Zaccaria , H W Mewes , M Bevan , P Fransz , Kazusa DNA Research Institute , Cold Spring Harbor and Washington University in St Louis Sequencing Consortium , European Union Arabidopsis Genome Sequencing Consortium	2000-12-14	AT5G10605, AT5G08305, AT5G19025, AT5G67265, AT5G53635, AT5G60335, AT5G62865, AT5G28442, AT5G04045, AT5G07225, MIR162A, AT5G09225, AT5G10625, AT5G10745, AT5G18475, AT5G18525, AT5G18636, AT5G20045, AGP41, AT5G26805, AT5G28237, AT5G35732, AT5G35737, AT5G37478, AT5G42235, AT5G42825, AT5G43185, AT5G44005, AT5G44565, AT5G45275, AT5G45660, AT5G48205, AT5G48335, HINT3, AT5G48657, AT5G49015, AT5G52547, AT5G55565, AT5G57565, AT5G66005, AT5G67245, AT5G08055, AT5G06043, AT5G01881, AT5G19172, AT5G19175, AT5G16486, AT5G03795, AT5G03406, AT5G22791, AT5G16453, AT5G23212, AT5G19473, AT5G19485, AT5G19315, AT5G08505, AT5G07740, AT5G23035, AT5G18403, AT5G18407, AT5G08315, AT5G04347, AT5G24318, AT5G26622, AT5G27495, AT5G28288, AT5G32460, AT5G32619, AT5G35050, AT5G35195, AT5G35660, AT5G35926, AT5G36001, AT5G36228, AT5G36300, AT5G37473, AT5G37474, LCR58, AT5G38344, SPH8, AT5G39365, AT5G40405, AT5G42146, AT5G42223, AT5G42232, LCR57, LCR28, AT5G43285, AT5G43401, AT5G43513, AT5G43518, AT5G43525, AT5G44973, SCRL27, AT5G46871, AT5G46873, AT5G46874, AT5G46877, LCR20

Pubmed编号

文献信息

发表日期

相关基因

28238658

Role of LOTR1 in Nutrient Transport through Organization of Spatial Distribution of Root Endodermal Barriers.

Curr Biol Baohai Li , Takehiro Kamiya , Lothar Kalmbach , Mutsumi Yamagami , Katsushi Yamaguchi , Shuji Shigenobu , Shinichiro Sawa , John M C Danku , David E Salt , Niko Geldner , Toru Fujiwara

2017-03-06

20855607

Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes.

Proc. Natl. Acad. Sci. U.S.A. Nabil Elrouby , George Coupland

2010-10-05

QPT, AT2G01690, AT2G07707, MCM9, AT2G17150, AT2G17410, HA1, AT2G20560, SYTA, SAE2, MGP1, AT2G22100, AT2G22360, AT2G25510, AT2G26270, PDR4, EIL1, LOG1, AT2G30990, AT2G32600, AT2G33600, AT2G35390, UBQ7, LOS2, AT2G38580, CYT1, DPE2, GPDHC1, AT2G41840, AT2G43210, AT2G44060, AT3G05670, AT3G06450, AT3G06660, SCN1, AAC1, AT3G09440, AT3G09500, EIF3G1, BIG, ITN1, HSP70, AT3G13225, ATBRXL2, PAP1, AT3G16670, MTO3, AT3G17900, LBD41, KIN10, VRN1, PSBTN, AT3G22970, HCF101, ICE1, PTAC16, AT3G47370, AT3G47836, AT3G47890, BCS1, LTA3, UBQ1, PIP2A, AT3G53870, AT3G54200, PMR6, PAT2, AT3G55520, SCE1, AT3G58050, AT3G61380, ATERDJ3B, RRF, AT4G08900, AT4G12780, ADA2B, G2484-1, AT4G18670, CMT2, TOC159, AT4G00870, AT4G23470, SGT1A, AT4G23670, AT4G23730, cpHsc70-1, CHLM, FIB2, AT4G25730, SUMO1, PPI1, AT4G27980, RPT2a, emb2726, HXK1, SNF7.1, VEL1, AT4G31210, AT4G34140

11130714

Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.

Nature S Tabata , T Kaneko , Y Nakamura , H Kotani , T Kato , E Asamizu , N Miyajima , S Sasamoto , T Kimura , T Hosouchi , K Kawashima , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , K Naruo , S Okumura , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Sato , M de la Bastide , E Huang , L Spiegel , L Gnoj , A O'Shaughnessy , R Preston , K Habermann , J Murray , D Johnson , T Rohlfing , J Nelson , T Stoneking , K Pepin , J Spieth , M Sekhon , J Armstrong , M Becker , E Belter , H Cordum , M Cordes , L Courtney , W Courtney , M Dante , H Du , J Edwards , J Fryman , B Haakensen , E Lamar , P Latreille , S Leonard , R Meyer , E Mulvaney , P Ozersky , A Riley , C Strowmatt , C Wagner-McPherson , A Wollam , M Yoakum , M Bell , N Dedhia , L Parnell , R Shah , M Rodriguez , L H See , D Vil , J Baker , K Kirchoff , K Toth , L King , A Bahret , B Miller , M Marra , R Martienssen , W R McCombie , R K Wilson , G Murphy , I Bancroft , G Volckaert , R Wambutt , A DÃ¼sterhÃ¶ft , W Stiekema , T Pohl , K D Entian , N Terryn , N Hartley , E Bent , S Johnson , S A Langham , B McCullagh , J Robben , B Grymonprez , W Zimmermann , U Ramsperger , H Wedler , K Balke , E Wedler , S Peters , M van Staveren , W Dirkse , P Mooijman , R K Lankhorst , T Weitzenegger , G Bothe , M Rose , J Hauf , S Berneiser , S Hempel , M Feldpausch , S Lamberth , R Villarroel , J Gielen , W Ardiles , O Bents , K Lemcke , G Kolesov , K Mayer , S Rudd , H Schoof , C Schueller , P Zaccaria , H W Mewes , M Bevan , P Fransz , Kazusa DNA Research Institute , Cold Spring Harbor and Washington University in St Louis Sequencing Consortium , European Union Arabidopsis Genome Sequencing Consortium

2000-12-14

AT5G10605, AT5G08305, AT5G19025, AT5G67265, AT5G53635, AT5G60335, AT5G62865, AT5G28442, AT5G04045, AT5G07225, MIR162A, AT5G09225, AT5G10625, AT5G10745, AT5G18475, AT5G18525, AT5G18636, AT5G20045, AGP41, AT5G26805, AT5G28237, AT5G35732, AT5G35737, AT5G37478, AT5G42235, AT5G42825, AT5G43185, AT5G44005, AT5G44565, AT5G45275, AT5G45660, AT5G48205, AT5G48335, HINT3, AT5G48657, AT5G49015, AT5G52547, AT5G55565, AT5G57565, AT5G66005, AT5G67245, AT5G08055, AT5G06043, AT5G01881, AT5G19172, AT5G19175, AT5G16486, AT5G03795, AT5G03406, AT5G22791, AT5G16453, AT5G23212, AT5G19473, AT5G19485, AT5G19315, AT5G08505, AT5G07740, AT5G23035, AT5G18403, AT5G18407, AT5G08315, AT5G04347, AT5G24318, AT5G26622, AT5G27495, AT5G28288, AT5G32460, AT5G32619, AT5G35050, AT5G35195, AT5G35660, AT5G35926, AT5G36001, AT5G36228, AT5G36300, AT5G37473, AT5G37474, LCR58, AT5G38344, SPH8, AT5G39365, AT5G40405, AT5G42146, AT5G42223, AT5G42232, LCR57, LCR28, AT5G43285, AT5G43401, AT5G43513, AT5G43518, AT5G43525, AT5G44973, SCRL27, AT5G46871, AT5G46873, AT5G46874, AT5G46877, LCR20

研究热度

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