Impact of cytosine methylation on DNA binding specificities of human transcription factors.

Science     Yimeng Yin , Ekaterina Morgunova , Arttu Jolma , Eevi Kaasinen , Biswajyoti Sahu , Syed Khund-Sayeed , Pratyush K Das , Teemu Kivioja , Kashyap Dave , Fan Zhong , Kazuhiro R Nitta , Minna Taipale , Alexander Popov , Paul A Ginno , Silvia Domcke , Jian Yan , Dirk Schübeler , Charles Vinson , Jussi Taipale

Common genetic variants associated with cognitive performance identified using the proxy-phenotype method.

Proc. Natl. Acad. Sci. U.S.A.     Cornelius A Rietveld , Tõnu Esko , Gail Davies , Tune H Pers , Patrick Turley , Beben Benyamin , Christopher F Chabris , Valur Emilsson , Andrew D Johnson , James J Lee , Christiaan de Leeuw , Riccardo E Marioni , Sarah E Medland , Michael B Miller , Olga Rostapshova , Sven J van der Lee , Anna A E Vinkhuyzen , Najaf Amin , Dalton Conley , Jaime Derringer , Cornelia M van Duijn , Rudolf Fehrmann , Lude Franke , Edward L Glaeser , Narelle K Hansell , Caroline Hayward , William G Iacono , Carla Ibrahim-Verbaas , Vincent Jaddoe , Juha Karjalainen , David Laibson , Paul Lichtenstein , David C Liewald , Patrik K E Magnusson , Nicholas G Martin , Matt McGue , George McMahon , Nancy L Pedersen , Steven Pinker , David J Porteous , Danielle Posthuma , Fernando Rivadeneira , Blair H Smith , John M Starr , Henning Tiemeier , Nicholas J Timpson , Maciej Trzaskowski , André G Uitterlinden , Frank C Verhulst , Mary E Ward , Margaret J Wright , George Davey Smith , Ian J Deary , Magnus Johannesson , Robert Plomin , Peter M Visscher , Daniel J Benjamin , David Cesarini , Philipp D Koellinger

DNA-binding specificities of human transcription factors.

Cell     Arttu Jolma , Jian Yan , Thomas Whitington , Jarkko Toivonen , Kazuhiro R Nitta , Pasi Rastas , Ekaterina Morgunova , Martin Enge , Mikko Taipale , Gonghong Wei , Kimmo Palin , Juan M Vaquerizas , Renaud Vincentelli , Nicholas M Luscombe , Timothy R Hughes , Patrick Lemaire , Esko Ukkonen , Teemu Kivioja , Jussi Taipale

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.

Brief. Bioinformatics     Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas

The SNAIL family member SCRATCH1 is not expressed in human tumors.

Oncol Rep     Jérémy Bastid , Benjamin Pierre Bouchet , Claire Ciancia , Julie Pourchet , Carole Audoynaud , Gaël Grelier , Alain Puisieux , Stéphane Ansieau

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

Genome Res.     Daniela S Gerhard , Lukas Wagner , Elise A Feingold , Carolyn M Shenmen , Lynette H Grouse , Greg Schuler , Steven L Klein , Susan Old , Rebekah Rasooly , Peter Good , Mark Guyer , Allison M Peck , Jeffery G Derge , David Lipman , Francis S Collins , Wonhee Jang , Steven Sherry , Mike Feolo , Leonie Misquitta , Eduardo Lee , Kirill Rotmistrovsky , Susan F Greenhut , Carl F Schaefer , Kenneth Buetow , Tom I Bonner , David Haussler , Jim Kent , Mark Kiekhaus , Terry Furey , Michael Brent , Christa Prange , Kirsten Schreiber , Nicole Shapiro , Narayan K Bhat , Ralph F Hopkins , Florence Hsie , Tom Driscoll , M Bento Soares , Tom L Casavant , Todd E Scheetz , Michael J Brown-stein , Ted B Usdin , Shiraki Toshiyuki , Piero Carninci , Yulan Piao , Dawood B Dudekula , Minoru S H Ko , Koichi Kawakami , Yutaka Suzuki , Sumio Sugano , C E Gruber , M R Smith , Blake Simmons , Troy Moore , Richard Waterman , Stephen L Johnson , Yijun Ruan , Chia Lin Wei , S Mathavan , Preethi H Gunaratne , Jiaqian Wu , Angela M Garcia , Stephen W Hulyk , Edwin Fuh , Ye Yuan , Anna Sneed , Carla Kowis , Anne Hodgson , Donna M Muzny , John McPherson , Richard A Gibbs , Jessica Fahey , Erin Helton , Mark Ketteman , Anuradha Madan , Stephanie Rodrigues , Amy Sanchez , Michelle Whiting , Anup Madari , Alice C Young , Keith D Wetherby , Steven J Granite , Peggy N Kwong , Charles P Brinkley , Russell L Pearson , Gerard G Bouffard , Robert W Blakesly , Eric D Green , Mark C Dickson , Alex C Rodriguez , Jane Grimwood , Jeremy Schmutz , Richard M Myers , Yaron S N Butterfield , Malachi Griffith , Obi L Griffith , Martin I Krzywinski , Nancy Liao , Ryan Morin , Ryan Morrin , Diana Palmquist , Anca S Petrescu , Ursula Skalska , Duane E Smailus , Jeff M Stott , Angelique Schnerch , Jacqueline E Schein , Steven J M Jones , Robert A Holt , Agnes Baross , Marco A Marra , Sandra Clifton , Kathryn A Makowski , Stephanie Bosak , Joel Malek , MGC Project Team

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.

Proc. Natl. Acad. Sci. U.S.A.     Robert L Strausberg , Elise A Feingold , Lynette H Grouse , Jeffery G Derge , Richard D Klausner , Francis S Collins , Lukas Wagner , Carolyn M Shenmen , Gregory D Schuler , Stephen F Altschul , Barry Zeeberg , Kenneth H Buetow , Carl F Schaefer , Narayan K Bhat , Ralph F Hopkins , Heather Jordan , Troy Moore , Steve I Max , Jun Wang , Florence Hsieh , Luda Diatchenko , Kate Marusina , Andrew A Farmer , Gerald M Rubin , Ling Hong , Mark Stapleton , M Bento Soares , Maria F Bonaldo , Tom L Casavant , Todd E Scheetz , Michael J Brownstein , Ted B Usdin , Shiraki Toshiyuki , Piero Carninci , Christa Prange , Sam S Raha , Naomi A Loquellano , Garrick J Peters , Rick D Abramson , Sara J Mullahy , Stephanie A Bosak , Paul J McEwan , Kevin J McKernan , Joel A Malek , Preethi H Gunaratne , Stephen Richards , Kim C Worley , Sarah Hale , Angela M Garcia , Laura J Gay , Stephen W Hulyk , Debbie K Villalon , Donna M Muzny , Erica J Sodergren , Xiuhua Lu , Richard A Gibbs , Jessica Fahey , Erin Helton , Mark Ketteman , Anuradha Madan , Stephanie Rodrigues , Amy Sanchez , Michelle Whiting , Anup Madan , Alice C Young , Yuriy Shevchenko , Gerard G Bouffard , Robert W Blakesley , Jeffrey W Touchman , Eric D Green , Mark C Dickson , Alex C Rodriguez , Jane Grimwood , Jeremy Schmutz , Richard M Myers , Yaron S N Butterfield , Martin I Krzywinski , Ursula Skalska , Duane E Smailus , Angelique Schnerch , Jacqueline E Schein , Steven J M Jones , Marco A Marra , Mammalian Gene Collection Program Team

Mammalian Scratch participates in neuronal differentiation in P19 embryonal carcinoma cells.

Brain Res. Mol. Brain Res.     E K Nakakura , D N Watkins , V Sriuranpong , M W Borges , B D Nelkin , D W Ball

Mammalian Scratch: a neural-specific Snail family transcriptional repressor.

Proc. Natl. Acad. Sci. U.S.A.     E K Nakakura , D N Watkins , K E Schuebel , V Sriuranpong , M W Borges , B D Nelkin , D W Ball

The sequence of the human genome.

Science     J C Venter , M D Adams , E W Myers , P W Li , R J Mural , G G Sutton , H O Smith , M Yandell , C A Evans , R A Holt , J D Gocayne , P Amanatides , R M Ballew , D H Huson , J R Wortman , Q Zhang , C D Kodira , X H Zheng , L Chen , M Skupski , G Subramanian , P D Thomas , J Zhang , G L Gabor Miklos , C Nelson , S Broder , A G Clark , J Nadeau , V A McKusick , N Zinder , A J Levine , R J Roberts , M Simon , C Slayman , M Hunkapiller , R Bolanos , A Delcher , I Dew , D Fasulo , M Flanigan , L Florea , A Halpern , S Hannenhalli , S Kravitz , S Levy , C Mobarry , K Reinert , K Remington , J Abu-Threideh , E Beasley , K Biddick , V Bonazzi , R Brandon , M Cargill , I Chandramouliswaran , R Charlab , K Chaturvedi , Z Deng , V Di Francesco , P Dunn , K Eilbeck , C Evangelista , A E Gabrielian , W Gan , W Ge , F Gong , Z Gu , P Guan , T J Heiman , M E Higgins , R R Ji , Z Ke , K A Ketchum , Z Lai , Y Lei , Z Li , J Li , Y Liang , X Lin , F Lu , G V Merkulov , N Milshina , H M Moore , A K Naik , V A Narayan , B Neelam , D Nusskern , D B Rusch , S Salzberg , W Shao , B Shue , J Sun , Z Wang , A Wang , X Wang , J Wang , M Wei , R Wides , C Xiao , C Yan , A Yao , J Ye , M Zhan , W Zhang , H Zhang , Q Zhao , L Zheng , F Zhong , W Zhong , S Zhu , S Zhao , D Gilbert , S Baumhueter , G Spier , C Carter , A Cravchik , T Woodage , F Ali , H An , A Awe , D Baldwin , H Baden , M Barnstead , I Barrow , K Beeson , D Busam , A Carver , A Center , M L Cheng , L Curry , S Danaher , L Davenport , R Desilets , S Dietz , K Dodson , L Doup , S Ferriera , N Garg , A Gluecksmann , B Hart , J Haynes , C Haynes , C Heiner , S Hladun , D Hostin , J Houck , T Howland , C Ibegwam , J Johnson , F Kalush , L Kline , S Koduru , A Love , F Mann , D May , S McCawley , T McIntosh , I McMullen , M Moy , L Moy , B Murphy , K Nelson , C Pfannkoch , E Pratts , V Puri , H Qureshi , M Reardon , R Rodriguez , Y H Rogers , D Romblad , B Ruhfel , R Scott , C Sitter , M Smallwood , E Stewart , R Strong , E Suh , R Thomas , N N Tint , S Tse , C Vech , G Wang , J Wetter , S Williams , M Williams , S Windsor , E Winn-Deen , K Wolfe , J Zaveri , K Zaveri , J F Abril , R Guigó , M J Campbell , K V Sjolander , B Karlak , A Kejariwal , H Mi , B Lazareva , T Hatton , A Narechania , K Diemer , A Muruganujan , N Guo , S Sato , V Bafna , S Istrail , R Lippert , R Schwartz , B Walenz , S Yooseph , D Allen , A Basu , J Baxendale , L Blick , M Caminha , J Carnes-Stine , P Caulk , Y H Chiang , M Coyne , C Dahlke , A Deslattes Mays , M Dombroski , M Donnelly , D Ely , S Esparham , C Fosler , H Gire , S Glanowski , K Glasser , A Glodek , M Gorokhov , K Graham , B Gropman , M Harris , J Heil , S Henderson , J Hoover , D Jennings , C Jordan , J Jordan , J Kasha , L Kagan , C Kraft , A Levitsky , M Lewis , X Liu , J Lopez , D Ma , W Majoros , J McDaniel , S Murphy , M Newman , T Nguyen , N Nguyen , M Nodell , S Pan , J Peck , M Peterson , W Rowe , R Sanders , J Scott , M Simpson , T Smith , A Sprague , T Stockwell , R Turner , E Venter , M Wang , M Wen , D Wu , M Wu , A Xia , A Zandieh , X Zhu