AT5G46580 - pentatricopeptide (PPR) repeat-containing protein-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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834701 AT5G46580

基因描述

Type	Description
Definition	pentatricopeptide (PPR) repeat-containing protein

研究结论

Date	Results	Publications
2018-04-14 10:03:00	SUPPRESSOR OF THYLAKOID FORMATION 1 (SOT1) has endonuclease activity and performs the endonucleolytic maturation of 23S and 4.5S rRNA through the PPR domain	28167782
2016-12-17 11:01:00	Data suggest that SUPPRESSOR OF THYLAKOID FORMATION1 (SOT1), a plastid-localized pentatricopeptide repeat (PPR) protein with a small MutS-related domain, binding protects the 5' extremity of the 23S-4.5S rRNA dicistron from exonucleolytic attack.	26800847

名称对应

Type	IDs
Synonymous	F10E10.5, F10E10_5
Gene	UniProtKB-ID: PP420_ARATH, A0A178UPY9_ARATH UniprotKB: Q9LS25, A0A178UPY9 UniParc: UPI000009E4F9 EMBL: CACSHJ010000096, CACRSJ010000110, CP002688, LUHQ01000005, AB028605 EnsemblGenome: AT5G46580 KO: ath:AT5G46580
Nucleutide sequences	EMBL-CDS: AED95400.1, BAA97529.1, OAO95417.1, VYS69500.1, CAA0408007.1 Gene_ORFName: F10E10.5, AN1_LOCUS24885, C24_LOCUS24718 EnsemblGenome_TRS: AT5G46580.1
Protein sequencees	EnsemblGenome_PRO: AT5G46580.1 RefSeq: NP_199470.1
Others	UniRef100: UniRef100_Q9LS25 UniRef90: UniRef90_Q9LS25 UniRef50: UniRef50_Q9LS25 UniGene: At.65647

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
28167782	PPR-SMR protein SOT1 has RNA endonuclease activity. Proc. Natl. Acad. Sci. U.S.A. Wen Zhou , Qingtao Lu , Qingwei Li , Lei Wang , Shunhua Ding , Aihong Zhang , Xiaogang Wen , Lixin Zhang , Congming Lu	2017-02-21	-
26800847	SOT1, a pentatricopeptide repeat protein with a small MutS-related domain, is required for correct processing of plastid 23S-4.5S rRNA precursors in Arabidopsis thaliana. Plant J. Wenjuan Wu , Sheng Liu , Hannes Ruwe , Delin Zhang , Joanna Melonek , Yajuan Zhu , Xupeng Hu , Sandra Gusewski , Ping Yin , Ian D Small , Katharine A Howell , Jirong Huang	2016-03-01	-
20935174	An Arabidopsis pentatricopeptide repeat protein, SUPPRESSOR OF VARIEGATION7, is required for FtsH-mediated chloroplast biogenesis. Plant Physiol. Xiayan Liu , Fei Yu , Steve Rodermel	2010-12-01	AT2G17033, GUN1, AT4G16390, AT5G46580, AT1G18900, AT1G74750, PTAC2, EMB2217, smrB
18431481	Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS One Boris Zybailov , Heidi Rutschow , Giulia Friso , Andrea Rudella , Olof Emanuelsson , Qi Sun , Klaas J van Wijk	2008-04-23	-
11130714	Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Nature S Tabata , T Kaneko , Y Nakamura , H Kotani , T Kato , E Asamizu , N Miyajima , S Sasamoto , T Kimura , T Hosouchi , K Kawashima , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , K Naruo , S Okumura , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Sato , M de la Bastide , E Huang , L Spiegel , L Gnoj , A O'Shaughnessy , R Preston , K Habermann , J Murray , D Johnson , T Rohlfing , J Nelson , T Stoneking , K Pepin , J Spieth , M Sekhon , J Armstrong , M Becker , E Belter , H Cordum , M Cordes , L Courtney , W Courtney , M Dante , H Du , J Edwards , J Fryman , B Haakensen , E Lamar , P Latreille , S Leonard , R Meyer , E Mulvaney , P Ozersky , A Riley , C Strowmatt , C Wagner-McPherson , A Wollam , M Yoakum , M Bell , N Dedhia , L Parnell , R Shah , M Rodriguez , L H See , D Vil , J Baker , K Kirchoff , K Toth , L King , A Bahret , B Miller , M Marra , R Martienssen , W R McCombie , R K Wilson , G Murphy , I Bancroft , G Volckaert , R Wambutt , A DÃ¼sterhÃ¶ft , W Stiekema , T Pohl , K D Entian , N Terryn , N Hartley , E Bent , S Johnson , S A Langham , B McCullagh , J Robben , B Grymonprez , W Zimmermann , U Ramsperger , H Wedler , K Balke , E Wedler , S Peters , M van Staveren , W Dirkse , P Mooijman , R K Lankhorst , T Weitzenegger , G Bothe , M Rose , J Hauf , S Berneiser , S Hempel , M Feldpausch , S Lamberth , R Villarroel , J Gielen , W Ardiles , O Bents , K Lemcke , G Kolesov , K Mayer , S Rudd , H Schoof , C Schueller , P Zaccaria , H W Mewes , M Bevan , P Fransz , Kazusa DNA Research Institute , Cold Spring Harbor and Washington University in St Louis Sequencing Consortium , European Union Arabidopsis Genome Sequencing Consortium	2000-12-14	AT5G10605, AT5G08305, AT5G19025, AT5G67265, AT5G53635, AT5G60335, AT5G62865, AT5G28442, AT5G04045, AT5G07225, MIR162A, AT5G09225, AT5G10625, AT5G10745, AT5G18475, AT5G18525, AT5G18636, AT5G20045, AGP41, AT5G26805, AT5G28237, AT5G35732, AT5G35737, AT5G37478, AT5G42235, AT5G42825, AT5G43185, AT5G44005, AT5G44565, AT5G45275, AT5G45660, AT5G48205, AT5G48335, HINT3, AT5G48657, AT5G49015, AT5G52547, AT5G55565, AT5G57565, AT5G66005, AT5G67245, AT5G08055, AT5G06043, AT5G01881, AT5G19172, AT5G19175, AT5G16486, AT5G03795, AT5G03406, AT5G22791, AT5G16453, AT5G23212, AT5G19473, AT5G19485, AT5G19315, AT5G08505, AT5G07740, AT5G23035, AT5G18403, AT5G18407, AT5G08315, AT5G04347, AT5G24318, AT5G26622, AT5G27495, AT5G28288, AT5G32460, AT5G32619, AT5G35050, AT5G35195, AT5G35660, AT5G35926, AT5G36001, AT5G36228, AT5G36300, AT5G37473, AT5G37474, LCR58, AT5G38344, SPH8, AT5G39365, AT5G40405, AT5G42146, AT5G42223, AT5G42232, LCR57, LCR28, AT5G43285, AT5G43401, AT5G43513, AT5G43518, AT5G43525, AT5G44973, SCRL27, AT5G46871, AT5G46873, AT5G46874, AT5G46877, LCR20

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