emb1138 - DEAD box RNA helicase (RH3)-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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832713 emb1138

基因描述

Type	Description
Definition	DEAD box RNA helicase (RH3)

研究结论

Date	Results	Publications
2013-09-07 10:47:00	RH3 is highly expressed in greening tissues of germinating seedlings, and chloroplasts in the rh3-4 mutant have fewer ribosomes, lower amounts of chlorophyll, and poorly developed thylakoids. rh3-4 seedlings displayed ABA-deficient phenotypes.	23227895
2012-11-03 11:47:00	The function of chloroplast RH3 in maize (Zea mays; ZmRH3) and Arabidopsis (Arabidopsis thaliana; AtRH3) was determined.	22576849

名称对应

Type	IDs
Synonymous	AtRH3, RH3, embryo defective 1138
Gene	UniProtKB-ID: RH3_ARATH, A0A178UT03_ARATH, A0A178URN6_ARATH, F4K180_ARATH UniprotKB: Q8L7S8, A0A178UT03, A0A178URN6, F4K180 UniParc: UPI0001E93180, UPI00000AC2AB, UPI000000C396 EMBL: AY102126, BT004533, BT000713, BT002456, CACSHJ010000096, CP002688, CACRSJ010000110, AK229821, AC137518, AJ010457, AY128278, AF058914, AY091068, LUHQ01000005, AY123000, AY094485, AY080625, BT002289 EnsemblGenome: AT5G26742 KO: ath:AT5G26742
Nucleutide sequences	EMBL-CDS: AAM91087.1, AAM13888.1, AED93564.1, BAF01652.1, CAA09196.1, AED93565.1, AAO00816.1, AAM26693.1, AAN31856.1, AAO42779.1, AAC13590.1, AAM19851.1, AAN72300.1, AAL85971.1, AAM67533.1, VYS67993.1, OAO96294.1, CAA0404967.1, OAO96293.1, AED93566.1 Gene_ORFName: F21E10.1, T7I7.6, C24_LOCUS23267, AN1_LOCUS23389 EnsemblGenome_TRS: AT5G26742.1, AT5G26742.2
Protein sequencees	EnsemblGenome_PRO: AT5G26742.1, AT5G26742.2 RefSeq: NP_001190402.1, NP_680225.2, NP_001031943.1
Others	UniRef100: UniRef100_F4K180, UniRef100_A0A178URN6, UniRef100_Q8L7S8 UniRef90: UniRef90_Q8L7S8, UniRef90_F4K180 UniRef50: UniRef50_F4K180, UniRef50_Q8L7S8 UniGene: At.23875, At.66764

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
32344669	Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Biomolecules Marcel Bach-Pages , Felix Homma , Jiorgos Kourelis , Farnusch Kaschani , Shabaz Mohammed , Markus Kaiser , Renier A L van der Hoorn , Alfredo Castello , Gail M Preston	2020-04-24	-
28887381	Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. Mol Cell Proteomics Zachary McBride , Donglai Chen , Christy Reick , Jun Xie , Daniel B Szymanski	2017-11-01	-
27729395	In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings. Plant Cell Marlene Reichel , Yalin Liao , Mandy Rettel , Chikako Ragan , Maurits Evers , Anne-Marie Alleaume , Rastislav Horos , Matthias W Hentze , Thomas Preiss , Anthony A Millar	2016-10-01	-
23975897	Identification and dynamics of Arabidopsis adaptor protein-2 complex and its involvement in floral organ development. Plant Cell Shohei Yamaoka , Yuki Shimono , Makoto Shirakawa , Yoichiro Fukao , Takashi Kawase , Noriyuki Hatsugai , Kentaro Tamura , Tomoo Shimada , Ikuko Hara-Nishimura	2013-08-01	apm4, AT2G07732, AT4G14305, AT2G01250, AT2G04390, AT2G04520, AT2G05920, AT2G09990, CHR5, AT2G16360, AT2G17360, AT2G17680, EMB2296, AT2G19750, AT2G24090, AT2G24370, AT2G25210, AT2G28120, PUB12, TUB7, AT2G31610, AT2G33800, AT2G34480, ACT1, CAC3, RPL23AA, AT2G40510, AT2G41840, AT2G42100, RPL16A, AT2G43460, AT2G45180, UBQ6, AT2G47610, AT3G04840, AT3G05060, RPL18, AT3G08530, AT3G09680, UBQ8, AT3G10950, AT3G11510, HSP70, AT3G14870, PLDALPHA1, AT3G16080, AT3G02560, AT3G18740, AT3G20820, AT3G24830, ATL5, RPL15, GAPA, GHS1, AT3G45030, EMB1080, BBC1, STV1, AT3G53870, AT3G54210, PSRP5, AT3G60110, AT3G60245, AT3G60770, AT3G62870, AT3G63490, LHCB5, AT4G11380, AT4G14385, AT4G15000, AT4G16550, AT4G16720, AT4G18100, AT4G19530, BAM3, AT4G01310, RPS13A, sks4, AT4G23460, AT4G24750, FIB2, AT4G27090, AT4G29770, RPS6, AT4G36600, AT5G06120, AT5G07400, AT5G09510, EMB3010, HSC70-1, AT5G14320, AT5G15200, AT5G16130, DAR4, ATMS1, iqd2, AT5G02490, AT5G02450, AT5G18380
23227895	Defective chloroplast development inhibits maintenance of normal levels of abscisic acid in a mutant of the Arabidopsis RH3 DEAD-box protein during early post-germination growth. Plant J. Kwang-Hee Lee , Jiyoung Park , Donna S Williams , Yuqing Xiong , Inhwan Hwang , Byung-Ho Kang	2013-03-01	emb1138
22576849	Chloroplast RH3 DEAD box RNA helicases in maize and Arabidopsis function in splicing of specific group II introns and affect chloroplast ribosome biogenesis. Plant Physiol Yukari Asakura , Erin Galarneau , Kenneth P Watkins , Alice Barkan , Klaas J van Wijk	2012-07-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
21094157	14-3-3 proteins fine-tune plant nutrient metabolism. FEBS Lett. Ryoung Shin , Joseph M Jez , Amarjit Basra , Bei Zhang , Daniel P Schachtman	2011-01-03	ArthMp038, LCR16, LCR46, ArthMp095, PAP1, RPI2, RGA1, BRL2, LCR72, ZAP1, AT2G07750, NIR1, ROC3, AT2G18140, GGPS4, PHYB, FRK1, AT2G19490, AT2G20030, AT2G20780, AT2G21130, RER1B, SR1, AT2G22420, HB6, HAT9, AT2G22950, GH3.3, CNGC6, AT2G24330, GLR2.2, RR12, PEX10, AGO5, AT2G28070, AT2G29880, WRKY25, AT2G30320, AT2G30330, RPT2, GSTF10, ASP1, AT2G31390, COP1, PKT3, AT2G33450, AT2G33730, AT2G34140, WAVE1, NF-YA4, WRKY35, VSR5, AT2G36460, DML1, MAT3, ABCB1, AT2G38010, AGT3, WRKY33, JAL23, AT2G39960, UBP5, PIP5K5, SFGH, PLDBETA1, AT2G42100, AT2G42360, NAC042, BIO2, AT2G43480, MAP1A, FLA8, ZAT, TLP3, GAPC1, SEC, SUVR4, AT3G05150, PRXIIF, CHR11, AT3G06450, GATA15, RPM1, GLR1.4, PK1, AT3G09470, DML2, HSP70, HAC5, MRP8, WBC27, CAX2, PPC3, EXPA12, IAA19, MTO3, CIPK1, CDC48C, HB-1
21189294	Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Plant Cell Kentaro Tamura , Yoichiro Fukao , Masaaki Iwamoto , Tokuko Haraguchi , Ikuko Hara-Nishimura	2010-12-01	AT1G06475, AT1G54445, AT1G08005, AT2G01050, RGA1, AT2G05120, GRP3S, GRP-3, XTH4, AT2G10940, AT2G11405, AT2G13440, AT2G16750, PIP2;8, IRE1A, HMGB4, AT2G18620, AT2G19870, NADP-ME1, AT2G19920, SK1, PMDH1, AT2G24060, AT2G24090, GLR2.2, AT2G25730, AT2G26120, AT2G27710, CPN60A, AT2G30050, AT2G30480, PSBP-2, VAR2, TEJ, HSP60-2, AT2G33800, LHB1B2, AT2G35040, AT2G35760, AT2G36480, RPL24A, AT2G36690, RPS5B, AT2G37690, AT2G38300, LP1, ANNAT4, EMB2765, RPL23AA, HOS1, AT2G40480, AT2G41620, AT2G41640, RPL16A, AT2G43030, EMB2766, AT2G46320, UNE5, AT2G47970, AT3G03960, AT3G04250, RPSAb, AT3G04930, AT3G05060, AT3G05250, RPL18, AT3G05670, IMPA-1, GSL10, AT3G07790, AT3G08030, AAC1, PYK10, AT3G09440, CDC48, ROXY1, AT3G10650, GLY2, AT3G11630, AT3G11830, ACT11, AT3G12390, HSP70, PGK1, AT3G13210, AT3G13470, AT3G13770, AT3G14120, ESM1, PME3, AT3G14415, AT3G14420, AT3G15280, AT3G15970, AT3G16200, RFC3, AT3G02820, TPLATE, AT3G01570
20855607	Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Proc. Natl. Acad. Sci. U.S.A. Nabil Elrouby , George Coupland	2010-10-05	QPT, AT2G01690, AT2G07707, MCM9, AT2G17150, AT2G17410, HA1, AT2G20560, SYTA, SAE2, MGP1, AT2G22100, AT2G22360, AT2G25510, AT2G26270, PDR4, EIL1, LOG1, AT2G30990, AT2G32600, AT2G33600, AT2G35390, UBQ7, LOS2, AT2G38580, CYT1, DPE2, GPDHC1, AT2G41840, AT2G43210, AT2G44060, AT3G05670, AT3G06450, AT3G06660, SCN1, AAC1, AT3G09440, AT3G09500, EIF3G1, BIG, ITN1, HSP70, AT3G13225, ATBRXL2, PAP1, AT3G16670, MTO3, AT3G17900, LBD41, KIN10, VRN1, PSBTN, AT3G22970, HCF101, ICE1, PTAC16, AT3G47370, AT3G47836, AT3G47890, BCS1, LTA3, UBQ1, PIP2A, AT3G53870, AT3G54200, PMR6, PAT2, AT3G55520, SCE1, AT3G58050, AT3G61380, ATERDJ3B, RRF, AT4G08900, AT4G12780, ADA2B, G2484-1, AT4G18670, CMT2, TOC159, AT4G00870, AT4G23470, SGT1A, AT4G23670, AT4G23730, cpHsc70-1, CHLM, FIB2, AT4G25730, SUMO1, PPI1, AT4G27980, RPT2a, emb2726, HXK1, SNF7.1, VEL1, AT4G31210, AT4G34140

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