AT5G19730 - Pectin lyase-like superfamily protein-BMKCloudï½ç¾è¿å®¢äº

832093 AT5G19730

基因描述

Type	Description
Definition	Pectin lyase-like superfamily protein

名称对应

Type	IDs
Synonymous	T29J13.150, T29J13_150
Gene	UniProtKB-ID: PME53_ARATH UniprotKB: Q8VYZ3 UniParc: UPI0000048B76 EMBL: AY065431, AF296838, AY096559, CP002688 EnsemblGenome: AT5G19730 KO: ath:AT5G19730
Nucleutide sequences	EMBL-CDS: AAM20209.1, AAL38872.1, AED92743.1 Gene_ORFName: T29J13.150 EnsemblGenome_TRS: AT5G19730.1
Protein sequencees	EnsemblGenome_PRO: AT5G19730.1 RefSeq: NP_197474.1
Others	UniRef100: UniRef100_Q8VYZ3 UniRef90: UniRef90_Q8VYZ3 UniRef50: UniRef50_Q8VYZ3 UniGene: At.28487

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

暂无数据

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Pubmed编号	文献信息	发表日期	相关基因
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
15610358	High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. Plant J. Olga A Koroleva , Matthew L Tomlinson , David Leader , Peter Shaw , John H Doonan	2005-01-01	APK2B, XTH4, NRPB3, FVE, AT2G20880, XK-1, AGP2, IAA8, CIPK3, AT2G27500, WRKY25, PUR ALPHA-1, ATP3, AT2G33710, AT2G33730, NF-YA4, AT2G35840, ADK, SNZ, BIK1, EIF2, GRF9, AT2G42910, AT2G43370, CKB4, ERF13, AT2G45680, AT2G45850, WRKY46, U1A, DRT102, RBK2, RPT5A, AT3G07720, AT3G10030, AT3G10330, AT3G10572, PGK1, ECT2, RHD3, AT3G14060, AT3G16800, PTB1, AT3G02530, FYPP3, AT3G20510, AT3G21770, AT3G23600, ATB' DELTA, ADF2, ARLA1C, FLN1, MYB109, PP2A-4, MBF1B, AT3G60180, AT4G07950, AT4G08170, CRY1, APX4, AHL1, HB-2, AT4G16830, EIF4E, AT4G18950, MPK4, AT4G23860, AT4G24690, PPX1, TAP38, CAK1AT, MKK2, XTH24, CYCD3;1, GATA3, bHLH11, AT4G37520, YLS8, AT5G12850, KIN2, AT5G18900, AT5G19730, AT5G19890, RAN2, TSL, AT5G23520, AT5G25440, AT5G28900, LSP1, AT5G36250, AT5G36790, AHP3, XPB1, BI1, D6PKL2, SCL8, OMT1, XTH12, eIFiso4G1
11130714	Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Nature S Tabata , T Kaneko , Y Nakamura , H Kotani , T Kato , E Asamizu , N Miyajima , S Sasamoto , T Kimura , T Hosouchi , K Kawashima , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , K Naruo , S Okumura , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Sato , M de la Bastide , E Huang , L Spiegel , L Gnoj , A O'Shaughnessy , R Preston , K Habermann , J Murray , D Johnson , T Rohlfing , J Nelson , T Stoneking , K Pepin , J Spieth , M Sekhon , J Armstrong , M Becker , E Belter , H Cordum , M Cordes , L Courtney , W Courtney , M Dante , H Du , J Edwards , J Fryman , B Haakensen , E Lamar , P Latreille , S Leonard , R Meyer , E Mulvaney , P Ozersky , A Riley , C Strowmatt , C Wagner-McPherson , A Wollam , M Yoakum , M Bell , N Dedhia , L Parnell , R Shah , M Rodriguez , L H See , D Vil , J Baker , K Kirchoff , K Toth , L King , A Bahret , B Miller , M Marra , R Martienssen , W R McCombie , R K Wilson , G Murphy , I Bancroft , G Volckaert , R Wambutt , A DÃ¼sterhÃ¶ft , W Stiekema , T Pohl , K D Entian , N Terryn , N Hartley , E Bent , S Johnson , S A Langham , B McCullagh , J Robben , B Grymonprez , W Zimmermann , U Ramsperger , H Wedler , K Balke , E Wedler , S Peters , M van Staveren , W Dirkse , P Mooijman , R K Lankhorst , T Weitzenegger , G Bothe , M Rose , J Hauf , S Berneiser , S Hempel , M Feldpausch , S Lamberth , R Villarroel , J Gielen , W Ardiles , O Bents , K Lemcke , G Kolesov , K Mayer , S Rudd , H Schoof , C Schueller , P Zaccaria , H W Mewes , M Bevan , P Fransz , Kazusa DNA Research Institute , Cold Spring Harbor and Washington University in St Louis Sequencing Consortium , European Union Arabidopsis Genome Sequencing Consortium	2000-12-14	AT5G10605, AT5G08305, AT5G19025, AT5G67265, AT5G53635, AT5G60335, AT5G62865, AT5G28442, AT5G04045, AT5G07225, MIR162A, AT5G09225, AT5G10625, AT5G10745, AT5G18475, AT5G18525, AT5G18636, AT5G20045, AGP41, AT5G26805, AT5G28237, AT5G35732, AT5G35737, AT5G37478, AT5G42235, AT5G42825, AT5G43185, AT5G44005, AT5G44565, AT5G45275, AT5G45660, AT5G48205, AT5G48335, HINT3, AT5G48657, AT5G49015, AT5G52547, AT5G55565, AT5G57565, AT5G66005, AT5G67245, AT5G08055, AT5G06043, AT5G01881, AT5G19172, AT5G19175, AT5G16486, AT5G03795, AT5G03406, AT5G22791, AT5G16453, AT5G23212, AT5G19473, AT5G19485, AT5G19315, AT5G08505, AT5G07740, AT5G23035, AT5G18403, AT5G18407, AT5G08315, AT5G04347, AT5G24318, AT5G26622, AT5G27495, AT5G28288, AT5G32460, AT5G32619, AT5G35050, AT5G35195, AT5G35660, AT5G35926, AT5G36001, AT5G36228, AT5G36300, AT5G37473, AT5G37474, LCR58, AT5G38344, SPH8, AT5G39365, AT5G40405, AT5G42146, AT5G42223, AT5G42232, LCR57, LCR28, AT5G43285, AT5G43401, AT5G43513, AT5G43518, AT5G43525, AT5G44973, SCRL27, AT5G46871, AT5G46873, AT5G46874, AT5G46877, LCR20

Pubmed编号

文献信息

发表日期

相关基因

21873635

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.

Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas

2011-09-01

15610358

High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions.

Plant J. Olga A Koroleva , Matthew L Tomlinson , David Leader , Peter Shaw , John H Doonan

2005-01-01

APK2B, XTH4, NRPB3, FVE, AT2G20880, XK-1, AGP2, IAA8, CIPK3, AT2G27500, WRKY25, PUR ALPHA-1, ATP3, AT2G33710, AT2G33730, NF-YA4, AT2G35840, ADK, SNZ, BIK1, EIF2, GRF9, AT2G42910, AT2G43370, CKB4, ERF13, AT2G45680, AT2G45850, WRKY46, U1A, DRT102, RBK2, RPT5A, AT3G07720, AT3G10030, AT3G10330, AT3G10572, PGK1, ECT2, RHD3, AT3G14060, AT3G16800, PTB1, AT3G02530, FYPP3, AT3G20510, AT3G21770, AT3G23600, ATB' DELTA, ADF2, ARLA1C, FLN1, MYB109, PP2A-4, MBF1B, AT3G60180, AT4G07950, AT4G08170, CRY1, APX4, AHL1, HB-2, AT4G16830, EIF4E, AT4G18950, MPK4, AT4G23860, AT4G24690, PPX1, TAP38, CAK1AT, MKK2, XTH24, CYCD3;1, GATA3, bHLH11, AT4G37520, YLS8, AT5G12850, KIN2, AT5G18900, AT5G19730, AT5G19890, RAN2, TSL, AT5G23520, AT5G25440, AT5G28900, LSP1, AT5G36250, AT5G36790, AHP3, XPB1, BI1, D6PKL2, SCL8, OMT1, XTH12, eIFiso4G1

11130714

Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.

Nature S Tabata , T Kaneko , Y Nakamura , H Kotani , T Kato , E Asamizu , N Miyajima , S Sasamoto , T Kimura , T Hosouchi , K Kawashima , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , K Naruo , S Okumura , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Sato , M de la Bastide , E Huang , L Spiegel , L Gnoj , A O'Shaughnessy , R Preston , K Habermann , J Murray , D Johnson , T Rohlfing , J Nelson , T Stoneking , K Pepin , J Spieth , M Sekhon , J Armstrong , M Becker , E Belter , H Cordum , M Cordes , L Courtney , W Courtney , M Dante , H Du , J Edwards , J Fryman , B Haakensen , E Lamar , P Latreille , S Leonard , R Meyer , E Mulvaney , P Ozersky , A Riley , C Strowmatt , C Wagner-McPherson , A Wollam , M Yoakum , M Bell , N Dedhia , L Parnell , R Shah , M Rodriguez , L H See , D Vil , J Baker , K Kirchoff , K Toth , L King , A Bahret , B Miller , M Marra , R Martienssen , W R McCombie , R K Wilson , G Murphy , I Bancroft , G Volckaert , R Wambutt , A DÃ¼sterhÃ¶ft , W Stiekema , T Pohl , K D Entian , N Terryn , N Hartley , E Bent , S Johnson , S A Langham , B McCullagh , J Robben , B Grymonprez , W Zimmermann , U Ramsperger , H Wedler , K Balke , E Wedler , S Peters , M van Staveren , W Dirkse , P Mooijman , R K Lankhorst , T Weitzenegger , G Bothe , M Rose , J Hauf , S Berneiser , S Hempel , M Feldpausch , S Lamberth , R Villarroel , J Gielen , W Ardiles , O Bents , K Lemcke , G Kolesov , K Mayer , S Rudd , H Schoof , C Schueller , P Zaccaria , H W Mewes , M Bevan , P Fransz , Kazusa DNA Research Institute , Cold Spring Harbor and Washington University in St Louis Sequencing Consortium , European Union Arabidopsis Genome Sequencing Consortium

2000-12-14

AT5G10605, AT5G08305, AT5G19025, AT5G67265, AT5G53635, AT5G60335, AT5G62865, AT5G28442, AT5G04045, AT5G07225, MIR162A, AT5G09225, AT5G10625, AT5G10745, AT5G18475, AT5G18525, AT5G18636, AT5G20045, AGP41, AT5G26805, AT5G28237, AT5G35732, AT5G35737, AT5G37478, AT5G42235, AT5G42825, AT5G43185, AT5G44005, AT5G44565, AT5G45275, AT5G45660, AT5G48205, AT5G48335, HINT3, AT5G48657, AT5G49015, AT5G52547, AT5G55565, AT5G57565, AT5G66005, AT5G67245, AT5G08055, AT5G06043, AT5G01881, AT5G19172, AT5G19175, AT5G16486, AT5G03795, AT5G03406, AT5G22791, AT5G16453, AT5G23212, AT5G19473, AT5G19485, AT5G19315, AT5G08505, AT5G07740, AT5G23035, AT5G18403, AT5G18407, AT5G08315, AT5G04347, AT5G24318, AT5G26622, AT5G27495, AT5G28288, AT5G32460, AT5G32619, AT5G35050, AT5G35195, AT5G35660, AT5G35926, AT5G36001, AT5G36228, AT5G36300, AT5G37473, AT5G37474, LCR58, AT5G38344, SPH8, AT5G39365, AT5G40405, AT5G42146, AT5G42223, AT5G42232, LCR57, LCR28, AT5G43285, AT5G43401, AT5G43513, AT5G43518, AT5G43525, AT5G44973, SCRL27, AT5G46871, AT5G46873, AT5G46874, AT5G46877, LCR20

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