| Type | Description |
|---|---|
| Definition | chromatin remodeling factor17 |
| Date | Results | Publications |
|---|---|---|
| 2018-02-17 10:38:00 | AtISWI is involved in the formation of the evenly spaced pattern of nucleosome arrangement in gene bodies-this pattern is associated with high transcriptional levels of genes.[review] | 28213686 |
| 2015-02-21 10:10:00 | Data indicate that double mutations in the AtISWI genes, CHROMATIN REMODELING 11 (CHR11) and CHR17, resulted in the loss of the evenly spaced nucleosome pattern in gene bodies. | 24606212 |
| Type | IDs |
|---|---|
| Synonymous | T1A4.2, chromatin remodeling factor17 |
| Gene |
UniProtKB-ID:
CHR17_ARATH,
A0A178UKL4_ARATH,
F4JY25_ARATH
UniprotKB:
F4JY24,
A0A178UKL4,
F4JY25
UniParc:
UPI0000196DC7,
UPI0000196DC8
EMBL:
AY035159,
LUHQ01000005,
CP002688,
AC051627
EnsemblGenome:
AT5G18620
KO:
ath:AT5G18620
|
| Nucleutide sequences |
EMBL-CDS:
AAK59663.1,
AED92587.1,
OAO94566.1,
AED92588.1
Gene_ORFName:
T1A4.2
EnsemblGenome_TRS:
AT5G18620.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT5G18620.1
RefSeq:
NP_850847.1,
NP_568365.2
|
| Others |
UniRef100:
UniRef100_F4JY24,
UniRef100_F4JY25
UniRef90:
UniRef90_F4JY24
UniRef50:
UniRef50_F4JY24
UniGene:
At.19176
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 32358072 |
Plant Cell Lian-Mei Tan , Rui Liu , Bo-Wen Gu , Cui-Jun Zhang , Jinyan Luo , Jing Guo , Yuhua Wang , Lixian Chen , Xuan Du , Sisi Li , Chang-Rong Shao , Yin-Na Su , Xue-Wei Cai , Rong-Nan Lin , Lin Li , She Chen , Jiamu Du , Xin-Jian He |
2020-07-01 | - |
| 28887381 |
Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. Mol Cell Proteomics Zachary McBride , Donglai Chen , Christy Reick , Jun Xie , Daniel B Szymanski |
2017-11-01 | - |
| 28213686 |
The ISWI remodeler in plants: protein complexes, biochemical functions, and developmental roles. Chromosoma Dongjie Li , Jie Liu , Wu Liu , Guang Li , Zhongnan Yang , Peng Qin , Lin Xu |
2017-06-01 | - |
| 27680998 |
Arabidopsis FORGETTER1 mediates stress-induced chromatin memory through nucleosome remodeling. Elife Krzysztof Brzezinka , Simone Altmann , Hjördis Czesnick , Philippe Nicolas , Michal Gorka , Eileen Benke , Tina Kabelitz , Felix Jähne , Alexander Graf , Christian Kappel , Isabel Bäurle |
2016-09-28 | - |
| 24606212 |
ISWI proteins participate in the genome-wide nucleosome distribution in Arabidopsis. Plant J. Guang Li , Shujing Liu , Jiawei Wang , Jianfeng He , Hai Huang , Yijing Zhang , Lin Xu |
2014-05-01 |
CHR11,
CHR17
|
| 22694359 |
Plant J. Guang Li , Jiawei Zhang , Jiqin Li , Zhongnan Yang , Hai Huang , Lin Xu |
2012-10-01 |
CHR11,
CHR17,
AT5G44180,
HB-1
|
| 22238427 |
Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development. Proc. Natl. Acad. Sci. U.S.A. Cezary Smaczniak , Richard G H Immink , Jose M Muiño , Robert Blanvillain , Marco Busscher , Jacqueline Busscher-Lange , Q D Peter Dinh , Shujing Liu , Adrie H Westphal , Sjef Boeren , François Parcy , Lin Xu , Cristel C Carles , Gerco C Angenent , Kerstin Kaufmann |
2012-01-31 |
PKL,
SYD,
LUH,
BLH1,
BRM,
CHR11,
REF6,
AP3,
INO80,
SHP1,
AG,
RPL,
CHR17,
PI,
KNAT3,
CHR4,
AGL8,
ARF2,
SEP3,
SPL8,
SEU,
AP1
|
| 21166475 |
J. Proteome Res. Jun Ito , Tanveer S Batth , Christopher J Petzold , Alyssa M Redding-Johanson , Aindrila Mukhopadhyay , Robert Verboom , Etienne H Meyer , A Harvey Millar , Joshua L Heazlewood |
2011-04-01 |
AT3G08943,
AT3G08947,
AT3G07030,
AT3G42170,
AT4G22285,
AT1G24800,
AT1G25055,
AT1G24881,
AT1G25211,
AT2G01250,
AT2G01690,
GSTZ1,
AT2G02400,
AL6,
CAND1,
UBC2,
GEK1,
AT2G03820,
CR88,
AT2G04390,
AT2G04400,
AT2G04520,
AT2G05220,
ACO3,
AT2G05920,
HEN2,
PFD1,
AT2G07360,
AT2G09990,
ABH1,
DRP3B,
PIP,
UGT73B4,
NIR1,
SQN,
AT2G15860,
HB1,
THY-1,
PAP10,
MCM4,
AT2G16485,
ASE1,
ROC3,
MSI2,
UBC23,
AT2G16940,
TRN1,
DSK2,
AT2G17280,
CPK6,
AT2G17360,
NTRA,
AT2G17930,
ATSLY1,
EMB2296,
PIN1AT,
AT2G18110,
AT2G18220,
COAD,
TPS11,
AT2G18740,
NAP1;2,
FVE,
CDA1,
PRMT1A,
PRF1,
AT2G20140,
CLASP,
RPN1A,
AT2G20760,
AT2G21130,
TIM,
AT2G21250,
UFD1,
AT2G21390,
CCR2,
AT2G22125,
AAT,
AT2G22420,
GEM,
SNRK2.9,
AT2G23070,
PAB4,
AT2G23820,
SNRNP-G,
eIFiso4G2,
AT2G24190,
AT2G24200,
AT2G24590,
MAPR2,
AT2G25670,
AT2G25970,
SEH,
FUS12,
PAG1,
CAM5,
AGO4,
SE,
AAO3
|
| 20706207 |
Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Mol. Syst. Biol. Jelle Van Leene , Jens Hollunder , Dominique Eeckhout , Geert Persiau , Eveline Van De Slijke , Hilde Stals , Gert Van Isterdael , Aurine Verkest , Sandy Neirynck , Yelle Buffel , Stefanie De Bodt , Steven Maere , Kris Laukens , Anne Pharazyn , Paulo C G Ferreira , Nubia Eloy , Charlotte Renne , Christian Meyer , Jean-Denis Faure , Jens Steinbrenner , Jim Beynon , John C Larkin , Yves Van de Peer , Pierre Hilson , Martin Kuiper , Lieven De Veylder , Harry Van Onckelen , Dirk Inzé , Erwin Witters , Geert De Jaeger |
2010-08-10 | - |
| 11130714 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Nature S Tabata , T Kaneko , Y Nakamura , H Kotani , T Kato , E Asamizu , N Miyajima , S Sasamoto , T Kimura , T Hosouchi , K Kawashima , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , K Naruo , S Okumura , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Sato , M de la Bastide , E Huang , L Spiegel , L Gnoj , A O'Shaughnessy , R Preston , K Habermann , J Murray , D Johnson , T Rohlfing , J Nelson , T Stoneking , K Pepin , J Spieth , M Sekhon , J Armstrong , M Becker , E Belter , H Cordum , M Cordes , L Courtney , W Courtney , M Dante , H Du , J Edwards , J Fryman , B Haakensen , E Lamar , P Latreille , S Leonard , R Meyer , E Mulvaney , P Ozersky , A Riley , C Strowmatt , C Wagner-McPherson , A Wollam , M Yoakum , M Bell , N Dedhia , L Parnell , R Shah , M Rodriguez , L H See , D Vil , J Baker , K Kirchoff , K Toth , L King , A Bahret , B Miller , M Marra , R Martienssen , W R McCombie , R K Wilson , G Murphy , I Bancroft , G Volckaert , R Wambutt , A Düsterhöft , W Stiekema , T Pohl , K D Entian , N Terryn , N Hartley , E Bent , S Johnson , S A Langham , B McCullagh , J Robben , B Grymonprez , W Zimmermann , U Ramsperger , H Wedler , K Balke , E Wedler , S Peters , M van Staveren , W Dirkse , P Mooijman , R K Lankhorst , T Weitzenegger , G Bothe , M Rose , J Hauf , S Berneiser , S Hempel , M Feldpausch , S Lamberth , R Villarroel , J Gielen , W Ardiles , O Bents , K Lemcke , G Kolesov , K Mayer , S Rudd , H Schoof , C Schueller , P Zaccaria , H W Mewes , M Bevan , P Fransz , Kazusa DNA Research Institute , Cold Spring Harbor and Washington University in St Louis Sequencing Consortium , European Union Arabidopsis Genome Sequencing Consortium |
2000-12-14 |
AT5G10605,
AT5G08305,
AT5G19025,
AT5G67265,
AT5G53635,
AT5G60335,
AT5G62865,
AT5G28442,
AT5G04045,
AT5G07225,
MIR162A,
AT5G09225,
AT5G10625,
AT5G10745,
AT5G18475,
AT5G18525,
AT5G18636,
AT5G20045,
AGP41,
AT5G26805,
AT5G28237,
AT5G35732,
AT5G35737,
AT5G37478,
AT5G42235,
AT5G42825,
AT5G43185,
AT5G44005,
AT5G44565,
AT5G45275,
AT5G45660,
AT5G48205,
AT5G48335,
HINT3,
AT5G48657,
AT5G49015,
AT5G52547,
AT5G55565,
AT5G57565,
AT5G66005,
AT5G67245,
AT5G08055,
AT5G06043,
AT5G01881,
AT5G19172,
AT5G19175,
AT5G16486,
AT5G03795,
AT5G03406,
AT5G22791,
AT5G16453,
AT5G23212,
AT5G19473,
AT5G19485,
AT5G19315,
AT5G08505,
AT5G07740,
AT5G23035,
AT5G18403,
AT5G18407,
AT5G08315,
AT5G04347,
AT5G24318,
AT5G26622,
AT5G27495,
AT5G28288,
AT5G32460,
AT5G32619,
AT5G35050,
AT5G35195,
AT5G35660,
AT5G35926,
AT5G36001,
AT5G36228,
AT5G36300,
AT5G37473,
AT5G37474,
LCR58,
AT5G38344,
SPH8,
AT5G39365,
AT5G40405,
AT5G42146,
AT5G42223,
AT5G42232,
LCR57,
LCR28,
AT5G43285,
AT5G43401,
AT5G43513,
AT5G43518,
AT5G43525,
AT5G44973,
SCRL27,
AT5G46871,
AT5G46873,
AT5G46874,
AT5G46877,
LCR20
|
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|---|---|---|
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