RSR4 - Aldolase-type TIM barrel family protein-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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831738 RSR4

基因描述

Type	Description
Definition	Aldolase-type TIM barrel family protein

研究结论

Date	Results	Publications
2019-09-21 10:41:00	Study shows that the integration of PDX1.2 into a heteromeric dodecamer assembly with PDX1.3 does not cause a major structural deviation from the overall architecture of the homomeric complex. Nonetheless, the structure of the PDX1.2-PDX1.3 complex highlights enhanced flexibility in key catalytic regions for the initial steps of vitamin B6 biosynthesis.	30988257
2018-01-27 11:24:00	X-ray structures of PDX1.3 from Arabidopsis thaliana, the overall architecture of which is a dodecamer of (beta/alpha)8 barrels, similar to the majority of its homologs, is reported.	27647886
2011-01-01 10:42:00	Data indicates a negative influence of PDX1.2 on vitamin B6 biosynthesis and a correlation between aberrant vitamin B6 content, PDX1 gene expression, and light sensitivity specifically for PDX1.3.	20675613
2010-01-21 00:00:00	This study shows that the spatial and temporal expression patterns of PDX1.1 and PDX1.3, investigated at the transcript and protein level, largely overlap, but PDX1.3 is more abundant than PDX1.1. [PDX1.3]	17227548

名称对应

Type	IDs
Synonymous	ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.3, ATPDX1, ATPDX1.3, PDX1, PDX1.3, PYRIDOXINE BIOSYNTHESIS 1.3, REDUCED SUGAR RESPONSE 4, T10O8.120, T10O8_120
Gene	UniProtKB-ID: PDX13_ARATH, A0A384KHQ3_ARATH, F6M3L4_ARATH UniprotKB: Q8L940, A0A384KHQ3, F6M3L4 UniParc: UPI00000AA185 EMBL: AY972813, AF428298, LUHQ01000005, AY097428, JF714983, AL161746, AK227197, CACSHJ010000096, CACRSJ010000110, AY088650, AF446352, CP002688 EnsemblGenome: AT5G01410 KO: ath:AT5G01410
Nucleutide sequences	EMBL-CDS: AED90340.1, ANM69812.1, AAL16130.1, AAL48227.1, BAE99236.1, AAM19944.1, AAY42123.1, AAM66972.1, CAB81924.1, OAO93649.1, CAA0399980.1, VYS65521.1, AEF15886.1 Gene_ORFName: T10O8.120, C24_LOCUS20825, AN1_LOCUS20927 EnsemblGenome_TRS: AT5G01410.1, AT5G01410.2
Protein sequencees	EnsemblGenome_PRO: AT5G01410.2, AT5G01410.1 RefSeq: NP_195761.1, NP_001331465.1
Others	UniRef100: UniRef100_Q8L940 UniRef90: UniRef90_Q8L940 UniRef50: UniRef50_Q8L940 UniGene: At.23386

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
30988257	Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3: a total eclipse. Acta Crystallogr D Struct Biol Graham C Robinson , Markus Kaufmann , CÃ©line Roux , Jacobo Martinez-Font , Michael Hothorn , StÃ©phane Thore , Teresa B Fitzpatrick	2019-04-01	-
30833711	Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. Nat Plants Jelle Van Leene , Chao Han , Astrid Gadeyne , Dominique Eeckhout , Caroline Matthijs , Bernard Cannoot , Nancy De Winne , Geert Persiau , Eveline Van De Slijke , Brigitte Van de Cotte , Elisabeth Stes , Michiel Van Bel , Veronique Storme , Francis Impens , Kris Gevaert , Klaas Vandepoele , Ive De Smet , Geert De Jaeger	2019-03-01	-
28887381	Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. Mol Cell Proteomics Zachary McBride , Donglai Chen , Christy Reick , Jun Xie , Daniel B Szymanski	2017-11-01	-
27647886	Structural definition of the lysine swing in Arabidopsis thaliana PDX1: Intermediate channeling facilitating vitamin B6 biosynthesis. Proc. Natl. Acad. Sci. U.S.A. Graham C Robinson , Markus Kaufmann , CÃ©line Roux , Teresa B Fitzpatrick	2016-10-04	-
25293756	A proteomic strategy for global analysis of plant protein complexes. Plant Cell Uma K Aryal , Yi Xiong , Zachary McBride , Daisuke Kihara , Jun Xie , Mark C Hall , Daniel B Szymanski	2014-10-01	GAPC1, AT3G05350, PRMT4B, RAD23C, SAHH2, MEE58, APP1, RAD23D, PRMT4A, HSP90.1, HSP81-3, GAPC2
23667124	Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Plant Cell Do-Young Kim , Mark Scalf , Lloyd M Smith , Richard D Vierstra	2013-05-01	AT1G80020, AT2G10780, AT2G15920, AT2G07660, AT2G31080, AT3G12915, AT3G42170, AT4G04420, AT4G16910, AT5G31087, AT3G22142, AT5G66631, AT2G07667, cox2, AT2G01250, AT2G01490, MLP328, MLP329, CAND1, MED8, SOT12, GEK1, CR88, IBR5, LHCB2.2, LHCB2.1, AT2G05830, XTH4, HEN2, AT2G07698, AT2G07734, AT2G12280, AGT, AT2G13820, ST4A, PIP2;8, AT2G16870, TRN1, IDH2, AT2G17630, PPa2, CHR8, HA1, ACO1, AT2G19730, AT2G20140, RPN1A, RD2, AT2G22125, AT2G22270, PFK5, AT2G22660, AT2G23070, AT2G23080, PAB4, AT2G24420, SDF2, CLPB4, AT2G25210, AT2G25300, AT2G25450, GLDP2, AT2G26780, GRV2, PAG1, AT2G27060, SE, FRS3, PGY1, AXS1, UXS6, AT2G28790, CDC6, AT2G29910, AT2G30050, UBA1, C4H, AT2G30740, SYCO ARATH, AT2G31390, AT2G31610, SAD2, AT2G31810, AT2G32450, AT2G32640, AT2G32730, PKT3, AT2G34250, UREG, AT2G34840, AT2G35040, AT2G35840, AT2G36290, SBE2.1, AT2G36460, LOS2, AT2G36580, AT2G36780, PAL1
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
21798944	Evidence for network evolution in an Arabidopsis interactome map. Science Arabidopsis Interactome Mapping Consortium	2011-07-29	AT2G01175, AT2G24693, AT2G42395, AT4G02725, SCRL10, AT4G23895, AT4G25315, AT4G36515, AT1G17285, AT1G30475, AT3G01435, AT3G15395, AT3G47675, AT3G54826, AT5G44565, AT5G52547, AT4G18205, ENA, ORC4, AT2G01190, AT2G01250, RPI2, MLP329, RGA1, AT2G01580, MEE11, AT2G01710, RR14, VIT1, PTR2, AT2G02050, ETL1, PP2-B5, PP2-B10, AT2G02410, AL6, CAND1, AT2G02570, PLPB, UTR1, AT2G02870, PKS1, RNS1, SPP, SK16, FT1, AT2G03430, AT2G03500, AT2G03505, AT2G03640, SPR1, AT2G03870, CR88, AT2G04100, AT2G04230, AT2G04390, IBR5, NRPB6B, AT2G04650, AT2G04690, AT2G04800, AT2G04900, AT2G05230, GRP-3, ATG8D, PAA2, OPR3, AT2G07738, MGDC, AT2G12290, AGT, NF-YB7, AT2G14835, AT2G14860, AT2G15270, ARFB1A, NRPB3, NIR1, PDV2, THY-1, BLH7, AT2G16710, UBC29, AT2G16800, PIP2;8, AT2G16880, AT2G16890, AT2G16900, AT2G16930, AT2G17150, DSK2, AT2G17350, AT2G17540, AT2G17670, AT2G17760, BZIP27, AT2G17880, AT2G17972, AT2G18110
21166475	Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J. Proteome Res. Jun Ito , Tanveer S Batth , Christopher J Petzold , Alyssa M Redding-Johanson , Aindrila Mukhopadhyay , Robert Verboom , Etienne H Meyer , A Harvey Millar , Joshua L Heazlewood	2011-04-01	AT3G08943, AT3G08947, AT3G07030, AT3G42170, AT4G22285, AT1G24800, AT1G25055, AT1G24881, AT1G25211, AT2G01250, AT2G01690, GSTZ1, AT2G02400, AL6, CAND1, UBC2, GEK1, AT2G03820, CR88, AT2G04390, AT2G04400, AT2G04520, AT2G05220, ACO3, AT2G05920, HEN2, PFD1, AT2G07360, AT2G09990, ABH1, DRP3B, PIP, UGT73B4, NIR1, SQN, AT2G15860, HB1, THY-1, PAP10, MCM4, AT2G16485, ASE1, ROC3, MSI2, UBC23, AT2G16940, TRN1, DSK2, AT2G17280, CPK6, AT2G17360, NTRA, AT2G17930, ATSLY1, EMB2296, PIN1AT, AT2G18110, AT2G18220, COAD, TPS11, AT2G18740, NAP1;2, FVE, CDA1, PRMT1A, PRF1, AT2G20140, CLASP, RPN1A, AT2G20760, AT2G21130, TIM, AT2G21250, UFD1, AT2G21390, CCR2, AT2G22125, AAT, AT2G22420, GEM, SNRK2.9, AT2G23070, PAB4, AT2G23820, SNRNP-G, eIFiso4G2, AT2G24190, AT2G24200, AT2G24590, MAPR2, AT2G25670, AT2G25970, SEH, FUS12, PAG1, CAM5, AGO4, SE, AAO3
20675613	Complex assembly and metabolic profiling of Arabidopsis thaliana plants overexpressing vitamin Bâ biosynthesis proteins. Mol Plant Jan Erik Leuendorf , Sonia Osorio , Agnieszka Szewczyk , Alisdair R Fernie , Hanjo Hellmann	2010-09-01	PDX1.2, RSR4

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