RARE1 - Pentatricopeptide repeat (PPR) superfamily protein-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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831168 RARE1

基因描述

Type	Description
Definition	Pentatricopeptide repeat (PPR) superfamily protein

研究结论

Date	Results	Publications
2012-08-25 11:31:00	Data show that the presence RIP1 (At3g15000.1) in a protein complex with chloroplast editing factor RARE1 (At5g13270.1) indicates that RIP1 is an important component of the RNA editing apparatus that acts on many chloroplast and mitochondrial C targets.	22566615

名称对应

Type	IDs
Synonymous	REQUIRED FOR ACCD RNA EDITING 1, T31B5.90, T31B5_90
Gene	UniProtKB-ID: PP378_ARATH UniprotKB: Q9LYU9 UniParc: UPI000009F622 EMBL: AL163491, CP002688 EnsemblGenome: AT5G13270 KO: ath:AT5G13270
Nucleutide sequences	EMBL-CDS: CAB86634.1, AED91873.1 Gene_ORFName: T31B5_90 EnsemblGenome_TRS: AT5G13270.1
Protein sequencees	EnsemblGenome_PRO: AT5G13270.1 RefSeq: NP_196831.1
Others	UniRef100: UniRef100_Q9LYU9 UniRef90: UniRef90_Q9LYU9 UniRef50: UniRef50_Q9LYU9 UniGene: At.65509

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
32344669	Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Biomolecules Marcel Bach-Pages , Felix Homma , Jiorgos Kourelis , Farnusch Kaschani , Shabaz Mohammed , Markus Kaiser , Renier A L van der Hoorn , Alfredo Castello , Gail M Preston	2020-04-24	-
22566615	RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing. Proc. Natl. Acad. Sci. U.S.A. Stephane Bentolila , Wade P Heller , Tao Sun , Arianne M Babina , Giulia Friso , Klaas J van Wijk , Maureen R Hanson	2012-05-29	AT3G15000, RARE1
19395655	A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript. RNA John C Robbins , Wade P Heller , Maureen R Hanson	2009-06-01	RARE1, accD
11130714	Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Nature S Tabata , T Kaneko , Y Nakamura , H Kotani , T Kato , E Asamizu , N Miyajima , S Sasamoto , T Kimura , T Hosouchi , K Kawashima , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , K Naruo , S Okumura , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Sato , M de la Bastide , E Huang , L Spiegel , L Gnoj , A O'Shaughnessy , R Preston , K Habermann , J Murray , D Johnson , T Rohlfing , J Nelson , T Stoneking , K Pepin , J Spieth , M Sekhon , J Armstrong , M Becker , E Belter , H Cordum , M Cordes , L Courtney , W Courtney , M Dante , H Du , J Edwards , J Fryman , B Haakensen , E Lamar , P Latreille , S Leonard , R Meyer , E Mulvaney , P Ozersky , A Riley , C Strowmatt , C Wagner-McPherson , A Wollam , M Yoakum , M Bell , N Dedhia , L Parnell , R Shah , M Rodriguez , L H See , D Vil , J Baker , K Kirchoff , K Toth , L King , A Bahret , B Miller , M Marra , R Martienssen , W R McCombie , R K Wilson , G Murphy , I Bancroft , G Volckaert , R Wambutt , A DÃ¼sterhÃ¶ft , W Stiekema , T Pohl , K D Entian , N Terryn , N Hartley , E Bent , S Johnson , S A Langham , B McCullagh , J Robben , B Grymonprez , W Zimmermann , U Ramsperger , H Wedler , K Balke , E Wedler , S Peters , M van Staveren , W Dirkse , P Mooijman , R K Lankhorst , T Weitzenegger , G Bothe , M Rose , J Hauf , S Berneiser , S Hempel , M Feldpausch , S Lamberth , R Villarroel , J Gielen , W Ardiles , O Bents , K Lemcke , G Kolesov , K Mayer , S Rudd , H Schoof , C Schueller , P Zaccaria , H W Mewes , M Bevan , P Fransz , Kazusa DNA Research Institute , Cold Spring Harbor and Washington University in St Louis Sequencing Consortium , European Union Arabidopsis Genome Sequencing Consortium	2000-12-14	AT5G10605, AT5G08305, AT5G19025, AT5G67265, AT5G53635, AT5G60335, AT5G62865, AT5G28442, AT5G04045, AT5G07225, MIR162A, AT5G09225, AT5G10625, AT5G10745, AT5G18475, AT5G18525, AT5G18636, AT5G20045, AGP41, AT5G26805, AT5G28237, AT5G35732, AT5G35737, AT5G37478, AT5G42235, AT5G42825, AT5G43185, AT5G44005, AT5G44565, AT5G45275, AT5G45660, AT5G48205, AT5G48335, HINT3, AT5G48657, AT5G49015, AT5G52547, AT5G55565, AT5G57565, AT5G66005, AT5G67245, AT5G08055, AT5G06043, AT5G01881, AT5G19172, AT5G19175, AT5G16486, AT5G03795, AT5G03406, AT5G22791, AT5G16453, AT5G23212, AT5G19473, AT5G19485, AT5G19315, AT5G08505, AT5G07740, AT5G23035, AT5G18403, AT5G18407, AT5G08315, AT5G04347, AT5G24318, AT5G26622, AT5G27495, AT5G28288, AT5G32460, AT5G32619, AT5G35050, AT5G35195, AT5G35660, AT5G35926, AT5G36001, AT5G36228, AT5G36300, AT5G37473, AT5G37474, LCR58, AT5G38344, SPH8, AT5G39365, AT5G40405, AT5G42146, AT5G42223, AT5G42232, LCR57, LCR28, AT5G43285, AT5G43401, AT5G43513, AT5G43518, AT5G43525, AT5G44973, SCRL27, AT5G46871, AT5G46873, AT5G46874, AT5G46877, LCR20

研究热度

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