| Type | Description |
|---|---|
| Definition | Transcription initiation Spt4-like protein |
| Date | Results | Publications |
|---|---|---|
| 2016-03-19 11:21:00 | Data indicate that SPT4 is a novel component of the plant RNA-directed DNA methylation pathway required for efficient DNA methylation at various loci and shares the locus specificity with SPT5L. | 26424658 |
| 2014-07-12 10:17:00 | SPT4/SPT5 acts as a transcript elongation factor in Arabidopsis, regulating transcription during the elongation stage with particular impact on the expression of certain auxin-related genes. | 24497194 |
| Type | IDs |
|---|---|
| Synonymous | SPT4-1 |
| Gene |
UniProtKB-ID:
SPT41_ARATH,
F4KB46_ARATH,
A0A178UPE0_ARATH
UniprotKB:
Q8LCQ3,
F4KB46,
A0A178UPE0
UniParc:
UPI0001E930A6,
UPI0000162478
EMBL:
CP002688,
AB006697,
BT024785,
AK228575,
AY086462,
LUHQ01000005
EnsemblGenome:
AT5G08565
KO:
ath:AT5G08565
|
| Nucleutide sequences |
EMBL-CDS:
ABD59123.1,
BAF00493.1,
AAM63465.1,
AED91322.1,
AED91323.1,
OAO95668.1
Gene_ORFName:
MAH20.24
EnsemblGenome_TRS:
AT5G08565.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT5G08565.1
RefSeq:
NP_001190264.1,
NP_568201.1
|
| Others |
UniRef100:
UniRef100_F4KB46,
UniRef100_Q8LCQ3
UniRef90:
UniRef90_F4KB46,
UniRef90_Q8LCQ3
UniRef50:
UniRef50_Q8LCQ3
UniGene:
At.32557
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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