AT4G39230 - NmrA-like negative transcriptional regulator family protein-BMKCloudï½ç¾è¿å®¢äº

830078 AT4G39230

基因描述

Type	Description
Definition	NmrA-like negative transcriptional regulator family protein

研究结论

Date	Results	Publications
2016-12-17 10:12:00	Data indicate that At4g39230, designated AtPCBER1, encodes a polypeptide with benzylic ether reductase (PCBER) activity and has a critical role in the biosynthesis of secondary metabolites.	26601823

名称对应

Type	IDs
Synonymous	T22F8.130, T22F8_130
Gene	UniProtKB-ID: PBER1_ARATH, A0A5S9Y0N1_ARATH UniprotKB: Q9T030, A0A5S9Y0N1 UniParc: UPI0000048A98 EMBL: AY080705, CP002687, AL161594, AL050351, CACSHJ010000095, AY150409 EnsemblGenome: AT4G39230 KO: ath:AT4G39230
Nucleutide sequences	EMBL-CDS: AEE87040.1, CAB80586.1, AAN12954.1, AAL85023.1, CAB43638.1, CAA0397987.1 Gene_ORFName: T22F8.130, C24_LOCUS20683 EnsemblGenome_TRS: AT4G39230.1
Protein sequencees	EnsemblGenome_PRO: AT4G39230.1 RefSeq: NP_195634.1
Others	UniRef100: UniRef100_Q9T030 UniRef90: UniRef90_Q9T030 UniRef50: UniRef50_Q9T030 UniGene: At.31110

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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Pubmed编号	文献信息	发表日期	相关基因
26601823	Expression and functional analyses of a putative phenylcoumaran benzylic ether reductase in Arabidopsis thaliana. Plant Cell Rep Nuoendagula , Naofumi Kamimura , Tetsuya Mori , Ryo Nakabayashi , Yukiko Tsuji , Shojiro Hishiyama , Kazuki Saito , Eiji Masai , Shinya Kajita	2016-03-01	-
16502469	The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. Proteomics Jean-Emmanuel Sarry , Lauriane Kuhn , CÃ©line Ducruix , Alexandra Lafaye , Christophe Junot , VÃ©ronique Hugouvieux , AgnÃ¨s Jourdain , Olivier Bastien , Julie B Fievet , Dominique Vailhen , Badia Amekraz , Christophe Moulin , Eric Ezan , JÃ©rÃ´me Garin , Jacques Bourguignon	2006-04-01	AT2G01140, ACO3, NTRA, AT2G17630, NAP1;2, AT2G19940, AT2G20420, AT2G21250, FBA1, CCR2, RNR1, PAB4, CNGC6, AT2G24200, ARF3, PAG1, TUB7, UBA1, GSTF10, ASP1, PUR ALPHA-1, AT2G32240, AT2G33590, AT2G33800, AT2G35840, AT2G36460, LOS2, AT2G37760, AT2G39920, AT2G41380, SFGH, HSFB3, PLDBETA1, PP5.2, OASB, AT2G44060, ATCS, AT2G45030, AT2G45290, TRIP-1, UNE5, GAPC1, PRXIIF, AT3G08590, AT3G01860, GSTU8, AT3G09440, ADK1, CDC48, AT3G11830, HCHIB, HSP70, emb2742, PGK1, SERAT2;2, AT3G13235, NAP1;4, HSP60-3A, EIF4A1, AT3G14990, RABA1g, PLDALPHA1, TCTP, mtLPD2, GLN1.3, MS2, AT3G02530, AT3G18190, PREP1, AT3G20390, AT3G21950, PAC1, POP2, PKP-ALPHA, HSP60, ROF1, PP2AA2, G6PD5, AT3G29380, NIT2, NIT3, AT3G46170, PHS2, ALDH2B4, AT3G48990, MDAR1, AT3G52930, AT3G52990, AT3G53230, PPa4, AT3G53880, AT3G54470, TPI, ROC2, CCH, ADSS, AT3G58610, DL1E, AT3G60750
10617198	Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Nature K Mayer , C SchÃ¼ller , R Wambutt , G Murphy , G Volckaert , T Pohl , A DÃ¼sterhÃ¶ft , W Stiekema , K D Entian , N Terryn , B Harris , W Ansorge , P Brandt , L Grivell , M Rieger , M Weichselgartner , V de Simone , B Obermaier , R Mache , M MÃ¼ller , M Kreis , M Delseny , P Puigdomenech , M Watson , T Schmidtheini , B Reichert , D Portatelle , M Perez-Alonso , M Boutry , I Bancroft , P Vos , J Hoheisel , W Zimmermann , H Wedler , P Ridley , S A Langham , B McCullagh , L Bilham , J Robben , J Van der Schueren , B Grymonprez , Y J Chuang , F Vandenbussche , M Braeken , I Weltjens , M Voet , I Bastiaens , R Aert , E Defoor , T Weitzenegger , G Bothe , U Ramsperger , H Hilbert , M Braun , E Holzer , A Brandt , S Peters , M van Staveren , W Dirske , P Mooijman , R Klein Lankhorst , M Rose , J Hauf , P KÃ¶tter , S Berneiser , S Hempel , M Feldpausch , S Lamberth , H Van den Daele , A De Keyser , C Buysshaert , J Gielen , R Villarroel , R De Clercq , M Van Montagu , J Rogers , A Cronin , M Quail , S Bray-Allen , L Clark , J Doggett , S Hall , M Kay , N Lennard , K McLay , R Mayes , A Pettett , M A Rajandream , M Lyne , V Benes , S Rechmann , D Borkova , H BlÃ¶cker , M Scharfe , M Grimm , T H LÃ¶hnert , S Dose , M de Haan , A Maarse , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , B Fartmann , K Granderath , D Dauner , A Herzl , S Neumann , A Argiriou , D Vitale , R Liguori , E Piravandi , O Massenet , F Quigley , G Clabauld , A MÃ¼ndlein , R Felber , S Schnabl , R Hiller , W Schmidt , A Lecharny , S Aubourg , F Chefdor , R Cooke , C Berger , A Montfort , E Casacuberta , T Gibbons , N Weber , M Vandenbol , M Bargues , J Terol , A Torres , A Perez-Perez , B Purnelle , E Bent , S Johnson , D Tacon , T Jesse , L Heijnen , S Schwarz , P Scholler , S Heber , P Francs , C Bielke , D Frishman , D Haase , K Lemcke , H W Mewes , S Stocker , P Zaccaria , M Bevan , R K Wilson , M de la Bastide , K Habermann , L Parnell , N Dedhia , L Gnoj , K Schutz , E Huang , L Spiegel , M Sehkon , J Murray , P Sheet , M Cordes , J Abu-Threideh , T Stoneking , J Kalicki , T Graves , G Harmon , J Edwards , P Latreille , L Courtney , J Cloud , A Abbott , K Scott , D Johnson , P Minx , D Bentley , B Fulton , N Miller , T Greco , K Kemp , J Kramer , L Fulton , E Mardis , M Dante , K Pepin , L Hillier , J Nelson , J Spieth , E Ryan , S Andrews , C Geisel , D Layman , H Du , J Ali , A Berghoff , K Jones , K Drone , M Cotton , C Joshu , B Antonoiu , M Zidanic , C Strong , H Sun , B Lamar , C Yordan , P Ma , J Zhong , R Preston , D Vil , M Shekher , A Matero , R Shah , I K Swaby , A O'Shaughnessy , M Rodriguez , J Hoffmann , S Till , S Granat , N Shohdy , A Hasegawa , A Hameed , M Lodhi , A Johnson , E Chen , M Marra , R Martienssen , W R McCombie	1999-12-16	AT4G22758, AT4G04972, AT4G04775, AT4G22305, AT4G39925, AT4G05475, AT4G15165, AT4G34419, AT4G26483, AT4G21534, AT4G19890, AT4G26485, AT4G01915, AT4G01985, AGL51, AT4G02405, AT4G02725, AT4G04925, AT4G10895, AT4G11211, AT4G11655, AT4G12735, AT4G13266, SCRL10, AT4G16015, AT4G16165, AT4G16380, AT4G19100, AT4G19910, AT4G19925, AT4G23515, AT4G23882, AT4G23895, AT4G24015, TPD1, AT4G25315, AT4G27415, AT4G28088, AT4G28405, AT4G32785, AT4G35430, AT4G36515, AT4G37235, AT4G25845, LCR2, AT4G10603, AT4G03505, AT4G18823, SCRL26, AT4G14272, AT4G14276, AT4G15248, AT4G14723, AT4G06688, LCR11, LCR34, AT4G06598, CYP71A28, AT4G22666, AT4G08028, AT4G04614, AT4G08875, AT4G08485, AT4G14819, LCR36, AT4G18501, AT4G11393, AT4G09647, LCR37, SCRL23, AT4G08039, AT4G14104, AT4G17713, AT4G17718, AT4G10613, AT4G08869, AT4G08867, AT4G08868, SCRL21, SCRL1, AT4G13968, PUP8, PUP7, AT4G18205, AT4G17100, AT4G16162, AT4G08267, AT4G01883, SCRL11, ARPC4, AT4G27745, AT4G00026, SCRL20, SCRL14, LCR13, AT4G02733, AT4G14305, LCR7, LCR15

Pubmed编号

文献信息

发表日期

相关基因

26601823

Expression and functional analyses of a putative phenylcoumaran benzylic ether reductase in Arabidopsis thaliana.

Plant Cell Rep Nuoendagula , Naofumi Kamimura , Tetsuya Mori , Ryo Nakabayashi , Yukiko Tsuji , Shojiro Hishiyama , Kazuki Saito , Eiji Masai , Shinya Kajita

2016-03-01

16502469

The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses.

Proteomics Jean-Emmanuel Sarry , Lauriane Kuhn , CÃ©line Ducruix , Alexandra Lafaye , Christophe Junot , VÃ©ronique Hugouvieux , AgnÃ¨s Jourdain , Olivier Bastien , Julie B Fievet , Dominique Vailhen , Badia Amekraz , Christophe Moulin , Eric Ezan , JÃ©rÃ´me Garin , Jacques Bourguignon

2006-04-01

AT2G01140, ACO3, NTRA, AT2G17630, NAP1;2, AT2G19940, AT2G20420, AT2G21250, FBA1, CCR2, RNR1, PAB4, CNGC6, AT2G24200, ARF3, PAG1, TUB7, UBA1, GSTF10, ASP1, PUR ALPHA-1, AT2G32240, AT2G33590, AT2G33800, AT2G35840, AT2G36460, LOS2, AT2G37760, AT2G39920, AT2G41380, SFGH, HSFB3, PLDBETA1, PP5.2, OASB, AT2G44060, ATCS, AT2G45030, AT2G45290, TRIP-1, UNE5, GAPC1, PRXIIF, AT3G08590, AT3G01860, GSTU8, AT3G09440, ADK1, CDC48, AT3G11830, HCHIB, HSP70, emb2742, PGK1, SERAT2;2, AT3G13235, NAP1;4, HSP60-3A, EIF4A1, AT3G14990, RABA1g, PLDALPHA1, TCTP, mtLPD2, GLN1.3, MS2, AT3G02530, AT3G18190, PREP1, AT3G20390, AT3G21950, PAC1, POP2, PKP-ALPHA, HSP60, ROF1, PP2AA2, G6PD5, AT3G29380, NIT2, NIT3, AT3G46170, PHS2, ALDH2B4, AT3G48990, MDAR1, AT3G52930, AT3G52990, AT3G53230, PPa4, AT3G53880, AT3G54470, TPI, ROC2, CCH, ADSS, AT3G58610, DL1E, AT3G60750

10617198

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.

Nature K Mayer , C SchÃ¼ller , R Wambutt , G Murphy , G Volckaert , T Pohl , A DÃ¼sterhÃ¶ft , W Stiekema , K D Entian , N Terryn , B Harris , W Ansorge , P Brandt , L Grivell , M Rieger , M Weichselgartner , V de Simone , B Obermaier , R Mache , M MÃ¼ller , M Kreis , M Delseny , P Puigdomenech , M Watson , T Schmidtheini , B Reichert , D Portatelle , M Perez-Alonso , M Boutry , I Bancroft , P Vos , J Hoheisel , W Zimmermann , H Wedler , P Ridley , S A Langham , B McCullagh , L Bilham , J Robben , J Van der Schueren , B Grymonprez , Y J Chuang , F Vandenbussche , M Braeken , I Weltjens , M Voet , I Bastiaens , R Aert , E Defoor , T Weitzenegger , G Bothe , U Ramsperger , H Hilbert , M Braun , E Holzer , A Brandt , S Peters , M van Staveren , W Dirske , P Mooijman , R Klein Lankhorst , M Rose , J Hauf , P KÃ¶tter , S Berneiser , S Hempel , M Feldpausch , S Lamberth , H Van den Daele , A De Keyser , C Buysshaert , J Gielen , R Villarroel , R De Clercq , M Van Montagu , J Rogers , A Cronin , M Quail , S Bray-Allen , L Clark , J Doggett , S Hall , M Kay , N Lennard , K McLay , R Mayes , A Pettett , M A Rajandream , M Lyne , V Benes , S Rechmann , D Borkova , H BlÃ¶cker , M Scharfe , M Grimm , T H LÃ¶hnert , S Dose , M de Haan , A Maarse , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , B Fartmann , K Granderath , D Dauner , A Herzl , S Neumann , A Argiriou , D Vitale , R Liguori , E Piravandi , O Massenet , F Quigley , G Clabauld , A MÃ¼ndlein , R Felber , S Schnabl , R Hiller , W Schmidt , A Lecharny , S Aubourg , F Chefdor , R Cooke , C Berger , A Montfort , E Casacuberta , T Gibbons , N Weber , M Vandenbol , M Bargues , J Terol , A Torres , A Perez-Perez , B Purnelle , E Bent , S Johnson , D Tacon , T Jesse , L Heijnen , S Schwarz , P Scholler , S Heber , P Francs , C Bielke , D Frishman , D Haase , K Lemcke , H W Mewes , S Stocker , P Zaccaria , M Bevan , R K Wilson , M de la Bastide , K Habermann , L Parnell , N Dedhia , L Gnoj , K Schutz , E Huang , L Spiegel , M Sehkon , J Murray , P Sheet , M Cordes , J Abu-Threideh , T Stoneking , J Kalicki , T Graves , G Harmon , J Edwards , P Latreille , L Courtney , J Cloud , A Abbott , K Scott , D Johnson , P Minx , D Bentley , B Fulton , N Miller , T Greco , K Kemp , J Kramer , L Fulton , E Mardis , M Dante , K Pepin , L Hillier , J Nelson , J Spieth , E Ryan , S Andrews , C Geisel , D Layman , H Du , J Ali , A Berghoff , K Jones , K Drone , M Cotton , C Joshu , B Antonoiu , M Zidanic , C Strong , H Sun , B Lamar , C Yordan , P Ma , J Zhong , R Preston , D Vil , M Shekher , A Matero , R Shah , I K Swaby , A O'Shaughnessy , M Rodriguez , J Hoffmann , S Till , S Granat , N Shohdy , A Hasegawa , A Hameed , M Lodhi , A Johnson , E Chen , M Marra , R Martienssen , W R McCombie

1999-12-16

AT4G22758, AT4G04972, AT4G04775, AT4G22305, AT4G39925, AT4G05475, AT4G15165, AT4G34419, AT4G26483, AT4G21534, AT4G19890, AT4G26485, AT4G01915, AT4G01985, AGL51, AT4G02405, AT4G02725, AT4G04925, AT4G10895, AT4G11211, AT4G11655, AT4G12735, AT4G13266, SCRL10, AT4G16015, AT4G16165, AT4G16380, AT4G19100, AT4G19910, AT4G19925, AT4G23515, AT4G23882, AT4G23895, AT4G24015, TPD1, AT4G25315, AT4G27415, AT4G28088, AT4G28405, AT4G32785, AT4G35430, AT4G36515, AT4G37235, AT4G25845, LCR2, AT4G10603, AT4G03505, AT4G18823, SCRL26, AT4G14272, AT4G14276, AT4G15248, AT4G14723, AT4G06688, LCR11, LCR34, AT4G06598, CYP71A28, AT4G22666, AT4G08028, AT4G04614, AT4G08875, AT4G08485, AT4G14819, LCR36, AT4G18501, AT4G11393, AT4G09647, LCR37, SCRL23, AT4G08039, AT4G14104, AT4G17713, AT4G17718, AT4G10613, AT4G08869, AT4G08867, AT4G08868, SCRL21, SCRL1, AT4G13968, PUP8, PUP7, AT4G18205, AT4G17100, AT4G16162, AT4G08267, AT4G01883, SCRL11, ARPC4, AT4G27745, AT4G00026, SCRL20, SCRL14, LCR13, AT4G02733, AT4G14305, LCR7, LCR15

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