| Type | Description |
|---|---|
| Definition | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein |
| Type | IDs |
|---|---|
| Synonymous | T22F8.2, short life |
| Gene |
UniProtKB-ID:
SHL_ARATH,
A0A178UWF3_ARATH,
F4JV93_ARATH
UniprotKB:
Q9FEN9,
A0A178UWF3,
F4JV93
UniParc:
UPI0001E92FFF,
UPI00000A1D03
EMBL:
CP002687,
AY088603,
AF277453,
AL161594,
AY050934,
AY079396,
LUHQ01000004,
AL035679
EnsemblGenome:
AT4G39100
KO:
ath:AT4G39100
|
| Nucleutide sequences |
EMBL-CDS:
AAM66132.1,
AEE87017.1,
AAG21353.1,
CAB80573.1,
AAL85127.1,
AAK93611.1,
CAB38830.1,
OAO97202.1,
AEE87018.1
Gene_ORFName:
F19H22.200,
T22F8.2
EnsemblGenome_TRS:
AT4G39100.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT4G39100.1
RefSeq:
NP_001190959.1,
NP_568053.1
|
| Others |
UniRef100:
UniRef100_F4JV93,
UniRef100_Q9FEN9
UniRef90:
UniRef90_Q9FEN9,
UniRef90_F4JV93
UniRef50:
UniRef50_V4LRF0,
UniRef50_Q9FEN9
UniGene:
At.47993,
At.70103
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 29930355 |
Dual recognition of H3K4me3 and H3K27me3 by a plant histone reader SHL. Nat Commun Shuiming Qian , Xinchen Lv , Ray N Scheid , Li Lu , Zhenlin Yang , Wei Chen , Rui Liu , Melissa D Boersma , John M Denu , Xuehua Zhong , Jiamu Du |
2018-06-21 | - |
| 28650476 |
CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Nat. Methods Shelly A Trigg , Renee M Garza , Andrew MacWilliams , Joseph R Nery , Anna Bartlett , Rosa Castanon , Adeline Goubil , Joseph Feeney , Ronan O'Malley , Shao-Shan C Huang , Zhuzhu Z Zhang , Mary Galli , Joseph R Ecker |
2017-08-01 | - |
| 25387881 |
A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Plant Cell Sascha Waidmann , Branislav Kusenda , Juliane Mayerhofer , Karl Mechtler , Claudia Jonak |
2014-11-01 |
AT1G55207,
AT3G41762,
AT1G48325,
AT2G07600,
LCR60,
AT3G07030,
AT4G11393,
AT4G06474,
AT4G06477,
AT1G27752,
AT1G55205,
AT4G11845,
AT2G39435,
AT2G27936,
AT2G01240,
AT2G05920,
HEN2,
NAD-ME1,
ROC3,
AT2G16900,
AT2G16940,
TRN1,
AT2G17110,
SR1,
CLPB4,
AT2G26230,
AT2G28540,
AT2G28605,
FAD3,
FC2,
CLE7,
AT2G32170,
NUDT22,
VSR5,
AT2G36810,
AT2G37520,
AT2G42480,
RPL16A,
AT2G44640,
CHL-CPN10,
AT2G44670,
CKI1,
SCC3,
AT3G04600,
PAPS3,
AT3G08670,
AT3G09440,
AT3G09550,
AT3G09670,
SS2,
BIG,
ROPGEF13,
AT3G17850,
MBD9,
AT3G19553,
AT3G24180,
AT3G25510,
AT3G27180,
AT3G29170,
AT3G30320,
AT3G43670,
NIT1,
HDA3,
AT3G47830,
AT3G51050,
AT3G55940,
NRPA1,
CER7,
RRF,
AT4G09340,
AT4G11810,
PLDGAMMA1,
AT4G12050,
ORP2B,
AT4G14230,
CKI1,
AT4G14760,
AT4G15960,
AT4G17140,
SRF8,
GH9B15,
ATR1,
AT4G25210,
FKBP53,
AT4G26630,
AT4G27010,
AT4G30020,
AT4G31350,
FLA5,
AT4G36370,
SFH12,
SRFR1,
SHL1,
AT5G01570,
AT5G06300,
SDG38,
AT5G08540,
CIPK5,
AT5G14460
|
| 25281686 |
Plant Cell Leticia López-González , Alfonso Mouriz , Laura Narro-Diego , Regla Bustos , José Miguel MartÃnez-Zapater , Jose A Jarillo , Manuel Piñeiro |
2014-10-01 |
EBS,
SHL1,
HDA6
|
| 21798944 |
Evidence for network evolution in an Arabidopsis interactome map. Science Arabidopsis Interactome Mapping Consortium |
2011-07-29 |
AT2G01175,
AT2G24693,
AT2G42395,
AT4G02725,
SCRL10,
AT4G23895,
AT4G25315,
AT4G36515,
AT1G17285,
AT1G30475,
AT3G01435,
AT3G15395,
AT3G47675,
AT3G54826,
AT5G44565,
AT5G52547,
AT4G18205,
ENA,
ORC4,
AT2G01190,
AT2G01250,
RPI2,
MLP329,
RGA1,
AT2G01580,
MEE11,
AT2G01710,
RR14,
VIT1,
PTR2,
AT2G02050,
ETL1,
PP2-B5,
PP2-B10,
AT2G02410,
AL6,
CAND1,
AT2G02570,
PLPB,
UTR1,
AT2G02870,
PKS1,
RNS1,
SPP,
SK16,
FT1,
AT2G03430,
AT2G03500,
AT2G03505,
AT2G03640,
SPR1,
AT2G03870,
CR88,
AT2G04100,
AT2G04230,
AT2G04390,
IBR5,
NRPB6B,
AT2G04650,
AT2G04690,
AT2G04800,
AT2G04900,
AT2G05230,
GRP-3,
ATG8D,
PAA2,
OPR3,
AT2G07738,
MGDC,
AT2G12290,
AGT,
NF-YB7,
AT2G14835,
AT2G14860,
AT2G15270,
ARFB1A,
NRPB3,
NIR1,
PDV2,
THY-1,
BLH7,
AT2G16710,
UBC29,
AT2G16800,
PIP2;8,
AT2G16880,
AT2G16890,
AT2G16900,
AT2G16930,
AT2G17150,
DSK2,
AT2G17350,
AT2G17540,
AT2G17670,
AT2G17760,
BZIP27,
AT2G17880,
AT2G17972,
AT2G18110
|
| 20855607 |
Proc. Natl. Acad. Sci. U.S.A. Nabil Elrouby , George Coupland |
2010-10-05 |
QPT,
AT2G01690,
AT2G07707,
MCM9,
AT2G17150,
AT2G17410,
HA1,
AT2G20560,
SYTA,
SAE2,
MGP1,
AT2G22100,
AT2G22360,
AT2G25510,
AT2G26270,
PDR4,
EIL1,
LOG1,
AT2G30990,
AT2G32600,
AT2G33600,
AT2G35390,
UBQ7,
LOS2,
AT2G38580,
CYT1,
DPE2,
GPDHC1,
AT2G41840,
AT2G43210,
AT2G44060,
AT3G05670,
AT3G06450,
AT3G06660,
SCN1,
AAC1,
AT3G09440,
AT3G09500,
EIF3G1,
BIG,
ITN1,
HSP70,
AT3G13225,
ATBRXL2,
PAP1,
AT3G16670,
MTO3,
AT3G17900,
LBD41,
KIN10,
VRN1,
PSBTN,
AT3G22970,
HCF101,
ICE1,
PTAC16,
AT3G47370,
AT3G47836,
AT3G47890,
BCS1,
LTA3,
UBQ1,
PIP2A,
AT3G53870,
AT3G54200,
PMR6,
PAT2,
AT3G55520,
SCE1,
AT3G58050,
AT3G61380,
ATERDJ3B,
RRF,
AT4G08900,
AT4G12780,
ADA2B,
G2484-1,
AT4G18670,
CMT2,
TOC159,
AT4G00870,
AT4G23470,
SGT1A,
AT4G23670,
AT4G23730,
cpHsc70-1,
CHLM,
FIB2,
AT4G25730,
SUMO1,
PPI1,
AT4G27980,
RPT2a,
emb2726,
HXK1,
SNF7.1,
VEL1,
AT4G31210,
AT4G34140
|
| 11129039 |
The Arabidopsis PHD-finger protein SHL is required for proper development and fertility. Mol. Gen. Genet. C Müssig , A Kauschmann , S D Clouse , T Altmann |
2000-11-01 | - |
| 10617198 |
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Nature K Mayer , C Schüller , R Wambutt , G Murphy , G Volckaert , T Pohl , A Düsterhöft , W Stiekema , K D Entian , N Terryn , B Harris , W Ansorge , P Brandt , L Grivell , M Rieger , M Weichselgartner , V de Simone , B Obermaier , R Mache , M Müller , M Kreis , M Delseny , P Puigdomenech , M Watson , T Schmidtheini , B Reichert , D Portatelle , M Perez-Alonso , M Boutry , I Bancroft , P Vos , J Hoheisel , W Zimmermann , H Wedler , P Ridley , S A Langham , B McCullagh , L Bilham , J Robben , J Van der Schueren , B Grymonprez , Y J Chuang , F Vandenbussche , M Braeken , I Weltjens , M Voet , I Bastiaens , R Aert , E Defoor , T Weitzenegger , G Bothe , U Ramsperger , H Hilbert , M Braun , E Holzer , A Brandt , S Peters , M van Staveren , W Dirske , P Mooijman , R Klein Lankhorst , M Rose , J Hauf , P Kötter , S Berneiser , S Hempel , M Feldpausch , S Lamberth , H Van den Daele , A De Keyser , C Buysshaert , J Gielen , R Villarroel , R De Clercq , M Van Montagu , J Rogers , A Cronin , M Quail , S Bray-Allen , L Clark , J Doggett , S Hall , M Kay , N Lennard , K McLay , R Mayes , A Pettett , M A Rajandream , M Lyne , V Benes , S Rechmann , D Borkova , H Blöcker , M Scharfe , M Grimm , T H Löhnert , S Dose , M de Haan , A Maarse , M Schäfer , S Müller-Auer , C Gabel , M Fuchs , B Fartmann , K Granderath , D Dauner , A Herzl , S Neumann , A Argiriou , D Vitale , R Liguori , E Piravandi , O Massenet , F Quigley , G Clabauld , A Mündlein , R Felber , S Schnabl , R Hiller , W Schmidt , A Lecharny , S Aubourg , F Chefdor , R Cooke , C Berger , A Montfort , E Casacuberta , T Gibbons , N Weber , M Vandenbol , M Bargues , J Terol , A Torres , A Perez-Perez , B Purnelle , E Bent , S Johnson , D Tacon , T Jesse , L Heijnen , S Schwarz , P Scholler , S Heber , P Francs , C Bielke , D Frishman , D Haase , K Lemcke , H W Mewes , S Stocker , P Zaccaria , M Bevan , R K Wilson , M de la Bastide , K Habermann , L Parnell , N Dedhia , L Gnoj , K Schutz , E Huang , L Spiegel , M Sehkon , J Murray , P Sheet , M Cordes , J Abu-Threideh , T Stoneking , J Kalicki , T Graves , G Harmon , J Edwards , P Latreille , L Courtney , J Cloud , A Abbott , K Scott , D Johnson , P Minx , D Bentley , B Fulton , N Miller , T Greco , K Kemp , J Kramer , L Fulton , E Mardis , M Dante , K Pepin , L Hillier , J Nelson , J Spieth , E Ryan , S Andrews , C Geisel , D Layman , H Du , J Ali , A Berghoff , K Jones , K Drone , M Cotton , C Joshu , B Antonoiu , M Zidanic , C Strong , H Sun , B Lamar , C Yordan , P Ma , J Zhong , R Preston , D Vil , M Shekher , A Matero , R Shah , I K Swaby , A O'Shaughnessy , M Rodriguez , J Hoffmann , S Till , S Granat , N Shohdy , A Hasegawa , A Hameed , M Lodhi , A Johnson , E Chen , M Marra , R Martienssen , W R McCombie |
1999-12-16 |
AT4G22758,
AT4G04972,
AT4G04775,
AT4G22305,
AT4G39925,
AT4G05475,
AT4G15165,
AT4G34419,
AT4G26483,
AT4G21534,
AT4G19890,
AT4G26485,
AT4G01915,
AT4G01985,
AGL51,
AT4G02405,
AT4G02725,
AT4G04925,
AT4G10895,
AT4G11211,
AT4G11655,
AT4G12735,
AT4G13266,
SCRL10,
AT4G16015,
AT4G16165,
AT4G16380,
AT4G19100,
AT4G19910,
AT4G19925,
AT4G23515,
AT4G23882,
AT4G23895,
AT4G24015,
TPD1,
AT4G25315,
AT4G27415,
AT4G28088,
AT4G28405,
AT4G32785,
AT4G35430,
AT4G36515,
AT4G37235,
AT4G25845,
LCR2,
AT4G10603,
AT4G03505,
AT4G18823,
SCRL26,
AT4G14272,
AT4G14276,
AT4G15248,
AT4G14723,
AT4G06688,
LCR11,
LCR34,
AT4G06598,
CYP71A28,
AT4G22666,
AT4G08028,
AT4G04614,
AT4G08875,
AT4G08485,
AT4G14819,
LCR36,
AT4G18501,
AT4G11393,
AT4G09647,
LCR37,
SCRL23,
AT4G08039,
AT4G14104,
AT4G17713,
AT4G17718,
AT4G10613,
AT4G08869,
AT4G08867,
AT4G08868,
SCRL21,
SCRL1,
AT4G13968,
PUP8,
PUP7,
AT4G18205,
AT4G17100,
AT4G16162,
AT4G08267,
AT4G01883,
SCRL11,
ARPC4,
AT4G27745,
AT4G00026,
SCRL20,
SCRL14,
LCR13,
AT4G02733,
AT4G14305,
LCR7,
LCR15
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
{{aff.value}} |
{{aff.size}} |
目前还没有研究热点单位
| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
{{author.value}} |
{{author.size}} |
目前还没有研究热点人员