nPAP - nuclear poly(a) polymerase-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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829421 nPAP

基因描述

Type	Description
Definition	nuclear poly(a) polymerase

研究结论

Date	Results	Publications
2013-11-30 11:02:00	The relative activities of canonical nuclear PAPS isoforms control de novo synthesized poly(A) tail length and hence expression of specific subsets of mRNAs.	23918356

名称对应

Type	IDs
Synonymous	PAP(IV), PAPS4, nuclear poly(a) polymerase, poly(A) polymerase 4, poly(A) polymerase IV
Gene	UniProtKB-ID: PAPS4_ARATH, A0A178UUT9_ARATH UniprotKB: Q8VYW1, A0A178UUT9 UniParc: UPI000034F15B, UPI0000196EA5, UPI000034F15C, UPI000034F15D, UPI00005DC0C5, UPI00005DC0C4, UPI00000AC506, UPI0001739467 EMBL: AK318704, LUHQ01000004, BT000485, CP002687, AY323908, AL161582, AK316738, AY069880, AK230297 EnsemblGenome: AT4G32850 KO: ath:AT4G32850
Nucleutide sequences	EMBL-CDS: AAP86216.1, AEE86128.1, ANM67865.1, AAL47435.1, AAN18054.1, CAB80002.1, ANM67868.1, ANM67867.1, AEE86132.1, AEE86127.1, BAH19461.1, ANM67869.1, AEE86131.1, BAF02098.1, AEE86130.1, ANM67871.1, AEE86133.1, AEE86134.1, AEE86129.1, ANM67866.1, BAH56819.1, ANM67870.1, AEE86135.1, AEE86126.1, OAO97679.1 Gene_ORFName: T16I18.60 EnsemblGenome_TRS: AT4G32850.6, AT4G32850.15, AT4G32850.2, AT4G32850.16, AT4G32850.9, AT4G32850.10, AT4G32850.11, AT4G32850.8, AT4G32850.12, AT4G32850.5, AT4G32850.3, AT4G32850.7, AT4G32850.17, AT4G32850.1, AT4G32850.4, AT4G32850.14, AT4G32850.13
Protein sequencees	EnsemblGenome_PRO: AT4G32850.6, AT4G32850.2, AT4G32850.15, AT4G32850.16, AT4G32850.9, AT4G32850.10, AT4G32850.11, AT4G32850.8, AT4G32850.12, AT4G32850.5, AT4G32850.3, AT4G32850.7, AT4G32850.1, AT4G32850.17, AT4G32850.4, AT4G32850.14, AT4G32850.13 RefSeq: NP_001329663.1, NP_974670.2, NP_974669.1, NP_001329667.1, NP_001329668.1, NP_849561.1, NP_001119103.1, NP_849562.2, NP_001329665.1, NP_001329664.1, NP_001329669.1, NP_195011.4, NP_001031778.1, NP_001119102.1, NP_001031779.1, NP_001329666.1, NP_974668.1
Others	UniRef100: UniRef100_A0A178UUT9, UniRef100_Q8VYW1 UniRef90: UniRef90_Q8VYW1 UniRef50: UniRef50_Q8VYW1 UniGene: At.25084

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
23918356	Target specificity among canonical nuclear poly(A) polymerases in plants modulates organ growth and pathogen response. Proc. Natl. Acad. Sci. U.S.A. Son Lang Vi , Gerda Trost , Peggy Lange , HjÃ¶rdis Czesnick , Nishta Rao , Diana Lieber , Thomas Laux , William M Gray , James L Manley , Detlef Groth , Christian Kappel , Michael Lenhard	2013-08-20	nPAP, PAPS1
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
19956626	Characterization of genes encoding poly(A) polymerases in plants: evidence for duplication and functional specialization. PLoS ONE Lisa R Meeks , Balasubrahmanyam Addepalli , Arthur G Hunt	2009-11-26	-
18479511	Arabidopsis mRNA polyadenylation machinery: comprehensive analysis of protein-protein interactions and gene expression profiling. BMC Genomics Arthur G Hunt , Ruqiang Xu , Balasubrahmanyam Addepalli , Suryadevara Rao , Kevin P Forbes , Lisa R Meeks , Denghui Xing , Min Mo , Hongwei Zhao , Amrita Bandyopadhyay , Lavanya Dampanaboina , Amanda Marion , Carol Von Lanken , Qingshun Quinn Li	2008-05-14	-
16282318	An Arabidopsis Fip1 homolog interacts with RNA and provides conceptual links with a number of other polyadenylation factor subunits. J Biol Chem Kevin P Forbes , Balasubrahmanyam Addepalli , Arthur G Hunt	2006-01-06	-
15297145	Novel alternative splicing of mRNAs encoding poly(A) polymerases in Arabidopsis. Biochim. Biophys. Acta Balasubrahmanyam Addepalli , Lisa R Meeks , Kevin P Forbes , Arthur G Hunt	2004-08-12	PAPS2, PAPS3, nPAP, PAPS1
12602868	An interaction between an Arabidopsis poly(A) polymerase and a homologue of the 100 kDa subunit of CPSF. Plant Mol. Biol. Barbara J Elliott , Tomal Dattaroy , Lisa R Meeks-Midkiff , Kevin P Forbes , Arthur G Hunt	2003-02-01	-
10617198	Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Nature K Mayer , C SchÃ¼ller , R Wambutt , G Murphy , G Volckaert , T Pohl , A DÃ¼sterhÃ¶ft , W Stiekema , K D Entian , N Terryn , B Harris , W Ansorge , P Brandt , L Grivell , M Rieger , M Weichselgartner , V de Simone , B Obermaier , R Mache , M MÃ¼ller , M Kreis , M Delseny , P Puigdomenech , M Watson , T Schmidtheini , B Reichert , D Portatelle , M Perez-Alonso , M Boutry , I Bancroft , P Vos , J Hoheisel , W Zimmermann , H Wedler , P Ridley , S A Langham , B McCullagh , L Bilham , J Robben , J Van der Schueren , B Grymonprez , Y J Chuang , F Vandenbussche , M Braeken , I Weltjens , M Voet , I Bastiaens , R Aert , E Defoor , T Weitzenegger , G Bothe , U Ramsperger , H Hilbert , M Braun , E Holzer , A Brandt , S Peters , M van Staveren , W Dirske , P Mooijman , R Klein Lankhorst , M Rose , J Hauf , P KÃ¶tter , S Berneiser , S Hempel , M Feldpausch , S Lamberth , H Van den Daele , A De Keyser , C Buysshaert , J Gielen , R Villarroel , R De Clercq , M Van Montagu , J Rogers , A Cronin , M Quail , S Bray-Allen , L Clark , J Doggett , S Hall , M Kay , N Lennard , K McLay , R Mayes , A Pettett , M A Rajandream , M Lyne , V Benes , S Rechmann , D Borkova , H BlÃ¶cker , M Scharfe , M Grimm , T H LÃ¶hnert , S Dose , M de Haan , A Maarse , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , B Fartmann , K Granderath , D Dauner , A Herzl , S Neumann , A Argiriou , D Vitale , R Liguori , E Piravandi , O Massenet , F Quigley , G Clabauld , A MÃ¼ndlein , R Felber , S Schnabl , R Hiller , W Schmidt , A Lecharny , S Aubourg , F Chefdor , R Cooke , C Berger , A Montfort , E Casacuberta , T Gibbons , N Weber , M Vandenbol , M Bargues , J Terol , A Torres , A Perez-Perez , B Purnelle , E Bent , S Johnson , D Tacon , T Jesse , L Heijnen , S Schwarz , P Scholler , S Heber , P Francs , C Bielke , D Frishman , D Haase , K Lemcke , H W Mewes , S Stocker , P Zaccaria , M Bevan , R K Wilson , M de la Bastide , K Habermann , L Parnell , N Dedhia , L Gnoj , K Schutz , E Huang , L Spiegel , M Sehkon , J Murray , P Sheet , M Cordes , J Abu-Threideh , T Stoneking , J Kalicki , T Graves , G Harmon , J Edwards , P Latreille , L Courtney , J Cloud , A Abbott , K Scott , D Johnson , P Minx , D Bentley , B Fulton , N Miller , T Greco , K Kemp , J Kramer , L Fulton , E Mardis , M Dante , K Pepin , L Hillier , J Nelson , J Spieth , E Ryan , S Andrews , C Geisel , D Layman , H Du , J Ali , A Berghoff , K Jones , K Drone , M Cotton , C Joshu , B Antonoiu , M Zidanic , C Strong , H Sun , B Lamar , C Yordan , P Ma , J Zhong , R Preston , D Vil , M Shekher , A Matero , R Shah , I K Swaby , A O'Shaughnessy , M Rodriguez , J Hoffmann , S Till , S Granat , N Shohdy , A Hasegawa , A Hameed , M Lodhi , A Johnson , E Chen , M Marra , R Martienssen , W R McCombie	1999-12-16	AT4G22758, AT4G04972, AT4G04775, AT4G22305, AT4G39925, AT4G05475, AT4G15165, AT4G34419, AT4G26483, AT4G21534, AT4G19890, AT4G26485, AT4G01915, AT4G01985, AGL51, AT4G02405, AT4G02725, AT4G04925, AT4G10895, AT4G11211, AT4G11655, AT4G12735, AT4G13266, SCRL10, AT4G16015, AT4G16165, AT4G16380, AT4G19100, AT4G19910, AT4G19925, AT4G23515, AT4G23882, AT4G23895, AT4G24015, TPD1, AT4G25315, AT4G27415, AT4G28088, AT4G28405, AT4G32785, AT4G35430, AT4G36515, AT4G37235, AT4G25845, LCR2, AT4G10603, AT4G03505, AT4G18823, SCRL26, AT4G14272, AT4G14276, AT4G15248, AT4G14723, AT4G06688, LCR11, LCR34, AT4G06598, CYP71A28, AT4G22666, AT4G08028, AT4G04614, AT4G08875, AT4G08485, AT4G14819, LCR36, AT4G18501, AT4G11393, AT4G09647, LCR37, SCRL23, AT4G08039, AT4G14104, AT4G17713, AT4G17718, AT4G10613, AT4G08869, AT4G08867, AT4G08868, SCRL21, SCRL1, AT4G13968, PUP8, PUP7, AT4G18205, AT4G17100, AT4G16162, AT4G08267, AT4G01883, SCRL11, ARPC4, AT4G27745, AT4G00026, SCRL20, SCRL14, LCR13, AT4G02733, AT4G14305, LCR7, LCR15

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