| Type | Description |
|---|---|
| Definition | choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) |
| Date | Results | Publications |
|---|---|---|
| 2019-01-25 14:13:00 | involved in hypocotyl elongation through the regulation of auxin flux. [BIIDXI] | 30253266 |
| 2015-11-07 11:20:00 | Transgenic lines overexpressing the DUF642 proteins encoded by At4g32460 and At5g11420 showed increased pectin methyl esterase 3 activity during seed germination, and improved seed germination performance. | 25442819 |
| Type | IDs |
|---|---|
| Synonymous | F8B4.160, F8B4_160 |
| Gene |
UniProtKB-ID:
A0A178V5J0_ARATH,
Q9SUU6_ARATH,
Q8LAR0_ARATH
UniprotKB:
A0A178V5J0,
Q9SUU6,
Q8LAR0
UniParc:
UPI000009D63F,
UPI000009F78A
EMBL:
AY087668,
AL034567,
AL161581,
BT025248,
LUHQ01000004,
CACRSJ010000109,
CP002687
EnsemblGenome:
AT4G32460
KO:
ath:AT4G32460
|
| Nucleutide sequences |
EMBL-CDS:
OAP00928.1,
VYS64653.1,
ANM67829.1,
CAB79963.1,
ANM67830.1,
CAA22573.1,
ABF19001.1,
AAM65206.1,
AEE86064.1,
AEE86063.1
Gene_ORFName:
AN1_LOCUS20064,
F8B4.160,
F8B4_160,
F8B4.160,
F8B4_160
|
| Protein sequencees |
RefSeq:
NP_001329630.1,
NP_974661.1,
NP_567894.1,
NP_001329631.1
|
| Others |
UniRef100:
UniRef100_A0A178V5J0
UniRef90:
UniRef90_A0A0D3A2L4
UniRef50:
UniRef50_O22940
UniGene:
At.24424,
At.66647
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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