RS40 - arginine/serine-rich splicing factor 35-BMKCloudï½ç¾è¿å®¢äº

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828654 RS40

基因描述

Type	Description
Definition	arginine/serine-rich splicing factor 35

研究结论

Date	Results	Publications
2016-01-20 12:34:00	Serine/arginine-rich splicing factors RS40 and RS41 affect the biogenesis of a subset of miRNA. [RS40]	26227967

名称对应

Type	IDs
Synonymous	ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35, ARGININE/SERINE-RICH SPLICING FACTOR, AT-SRP40, ATRSP35, ATRSP40, At-RS40, RSP35, SPLICING FACTOR AT-SRP40, T30C3.9, arginine/serine-rich splicing factor 35, arginine/serine-rich splicing factor 40
Gene	UniProtKB-ID: RS40_ARATH, A0A1P8B539_ARATH, A0A384KI10_ARATH, A0A654FSN0_ARATH UniprotKB: P92965, A0A1P8B539, A0A384KI10, A0A654FSN0 UniParc: UPI0007DF69C3, UPI0001505590, UPI0000134FC5, UPI000034F115 EMBL: CACRSJ010000109, CP002687, U76607, X99437, LUHQ01000004, AK317405, AL022197, AK317023 EnsemblGenome: AT4G25500 KO: ath:AT4G25500
Nucleutide sequences	EMBL-CDS: AEE85067.1, AEE85070.1, ANM66707.1, AEE85069.1, BAH20075.1, AAB18813.1, CAA67800.1, BAH19717.1, CAA18176.1, ANM66705.1, ANM66704.1, AEE85068.2, ANM66706.1, OAP00102.1, VYS63881.1 Gene_ORFName: M7J2.130, T30C3.9, AN1_LOCUS19294 EnsemblGenome_TRS: AT4G25500.4, AT4G25500.3, AT4G25500.6, AT4G25500.1
Protein sequencees	EnsemblGenome_PRO: AT4G25500.6, AT4G25500.1, AT4G25500.4, AT4G25500.3 RefSeq: NP_194280.1, NP_001320063.1, NP_001328587.1, NP_001190837.1, NP_974616.2, NP_001328586.1, NP_001078447.1, NP_001328585.1
Others	UniRef100: UniRef100_A0A1P8B539, UniRef100_P92965 UniRef90: UniRef90_P92965 UniRef50: UniRef50_P92966 UniGene: At.10187

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
26227967	The RNA-binding protein HOS5 and serine/arginine-rich proteins RS40 and RS41 participate in miRNA biogenesis in Arabidopsis. Nucleic Acids Res. Tao Chen , Peng Cui , Liming Xiong	2015-09-30	RSP35, ATRSP41, AT5G53060, HYL1
24146632	A KH-domain RNA-binding protein interacts with FIERY2/CTD phosphatase-like 1 and splicing factors and is important for pre-mRNA splicing in Arabidopsis. PLoS Genet. Tao Chen , Peng Cui , Hao Chen , Shahjahan Ali , Shoudong Zhang , Liming Xiong	2013-01-01	CPL1, AT5G53060
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
18535787	Identification of ubiquitinated proteins in Arabidopsis. Plant Mol. Biol. ConcepciÃ³n Manzano , Zamira Abraham , Gema LÃ³pez-TorrejÃ³n , Juan C Del Pozo	2008-09-01	-
16497658	AtCyp59 is a multidomain cyclophilin from Arabidopsis thaliana that interacts with SR proteins and the C-terminal domain of the RNA polymerase II. RNA Monika Gullerova , Andrea Barta , Zdravko J Lorkovic	2006-04-01	RSZ33, SCL30A, SCL30, RSP31, RSP35, NRPB1, SCL28, SC35, ATSRP30, RSZP21, SR1, CYP59, SR33
16807317	Phosphoproteomics reveals extensive in vivo phosphorylation of Arabidopsis proteins involved in RNA metabolism. Nucleic Acids Res. Sergio de la Fuente van Bentem , Dorothea Anrather , Elisabeth Roitinger , Armin Djamei , Thomas Hufnagl , Andrea Barta , Edina Csaszar , Ilse Dohnal , David Lecourieux , Heribert Hirt	2006-01-01	AT2G24590, AT2G29210, RSZ33, SCL30A, SRp34a, SRPK4, RSZ32, SCL30, RSP31, AT3G63400, RSP35, SRZ-22, BTR1L, AT5G51300, ATRSP41, SC35, AT1G07350, SR45, PRP39, ESP3, SR33
15987817	Evolutionary conservation of minor U12-type spliceosome between plants and humans. RNA Zdravko J Lorkovic , Reinhard Lehner , Christina Forstner , Andrea Barta	2005-07-01	-
15133128	Use of fluorescent protein tags to study nuclear organization of the spliceosomal machinery in transiently transformed living plant cells. Mol. Biol. Cell Zdravko J LorkoviÄ , Julia Hilscher , Andrea Barta	2004-07-01	-
10617198	Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Nature K Mayer , C SchÃ¼ller , R Wambutt , G Murphy , G Volckaert , T Pohl , A DÃ¼sterhÃ¶ft , W Stiekema , K D Entian , N Terryn , B Harris , W Ansorge , P Brandt , L Grivell , M Rieger , M Weichselgartner , V de Simone , B Obermaier , R Mache , M MÃ¼ller , M Kreis , M Delseny , P Puigdomenech , M Watson , T Schmidtheini , B Reichert , D Portatelle , M Perez-Alonso , M Boutry , I Bancroft , P Vos , J Hoheisel , W Zimmermann , H Wedler , P Ridley , S A Langham , B McCullagh , L Bilham , J Robben , J Van der Schueren , B Grymonprez , Y J Chuang , F Vandenbussche , M Braeken , I Weltjens , M Voet , I Bastiaens , R Aert , E Defoor , T Weitzenegger , G Bothe , U Ramsperger , H Hilbert , M Braun , E Holzer , A Brandt , S Peters , M van Staveren , W Dirske , P Mooijman , R Klein Lankhorst , M Rose , J Hauf , P KÃ¶tter , S Berneiser , S Hempel , M Feldpausch , S Lamberth , H Van den Daele , A De Keyser , C Buysshaert , J Gielen , R Villarroel , R De Clercq , M Van Montagu , J Rogers , A Cronin , M Quail , S Bray-Allen , L Clark , J Doggett , S Hall , M Kay , N Lennard , K McLay , R Mayes , A Pettett , M A Rajandream , M Lyne , V Benes , S Rechmann , D Borkova , H BlÃ¶cker , M Scharfe , M Grimm , T H LÃ¶hnert , S Dose , M de Haan , A Maarse , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , B Fartmann , K Granderath , D Dauner , A Herzl , S Neumann , A Argiriou , D Vitale , R Liguori , E Piravandi , O Massenet , F Quigley , G Clabauld , A MÃ¼ndlein , R Felber , S Schnabl , R Hiller , W Schmidt , A Lecharny , S Aubourg , F Chefdor , R Cooke , C Berger , A Montfort , E Casacuberta , T Gibbons , N Weber , M Vandenbol , M Bargues , J Terol , A Torres , A Perez-Perez , B Purnelle , E Bent , S Johnson , D Tacon , T Jesse , L Heijnen , S Schwarz , P Scholler , S Heber , P Francs , C Bielke , D Frishman , D Haase , K Lemcke , H W Mewes , S Stocker , P Zaccaria , M Bevan , R K Wilson , M de la Bastide , K Habermann , L Parnell , N Dedhia , L Gnoj , K Schutz , E Huang , L Spiegel , M Sehkon , J Murray , P Sheet , M Cordes , J Abu-Threideh , T Stoneking , J Kalicki , T Graves , G Harmon , J Edwards , P Latreille , L Courtney , J Cloud , A Abbott , K Scott , D Johnson , P Minx , D Bentley , B Fulton , N Miller , T Greco , K Kemp , J Kramer , L Fulton , E Mardis , M Dante , K Pepin , L Hillier , J Nelson , J Spieth , E Ryan , S Andrews , C Geisel , D Layman , H Du , J Ali , A Berghoff , K Jones , K Drone , M Cotton , C Joshu , B Antonoiu , M Zidanic , C Strong , H Sun , B Lamar , C Yordan , P Ma , J Zhong , R Preston , D Vil , M Shekher , A Matero , R Shah , I K Swaby , A O'Shaughnessy , M Rodriguez , J Hoffmann , S Till , S Granat , N Shohdy , A Hasegawa , A Hameed , M Lodhi , A Johnson , E Chen , M Marra , R Martienssen , W R McCombie	1999-12-16	AT4G22758, AT4G04972, AT4G04775, AT4G22305, AT4G39925, AT4G05475, AT4G15165, AT4G34419, AT4G26483, AT4G21534, AT4G19890, AT4G26485, AT4G01915, AT4G01985, AGL51, AT4G02405, AT4G02725, AT4G04925, AT4G10895, AT4G11211, AT4G11655, AT4G12735, AT4G13266, SCRL10, AT4G16015, AT4G16165, AT4G16380, AT4G19100, AT4G19910, AT4G19925, AT4G23515, AT4G23882, AT4G23895, AT4G24015, TPD1, AT4G25315, AT4G27415, AT4G28088, AT4G28405, AT4G32785, AT4G35430, AT4G36515, AT4G37235, AT4G25845, LCR2, AT4G10603, AT4G03505, AT4G18823, SCRL26, AT4G14272, AT4G14276, AT4G15248, AT4G14723, AT4G06688, LCR11, LCR34, AT4G06598, CYP71A28, AT4G22666, AT4G08028, AT4G04614, AT4G08875, AT4G08485, AT4G14819, LCR36, AT4G18501, AT4G11393, AT4G09647, LCR37, SCRL23, AT4G08039, AT4G14104, AT4G17713, AT4G17718, AT4G10613, AT4G08869, AT4G08867, AT4G08868, SCRL21, SCRL1, AT4G13968, PUP8, PUP7, AT4G18205, AT4G17100, AT4G16162, AT4G08267, AT4G01883, SCRL11, ARPC4, AT4G27745, AT4G00026, SCRL20, SCRL14, LCR13, AT4G02733, AT4G14305, LCR7, LCR15
8989882	Characterization of a novel arginine/serine-rich splicing factor in Arabidopsis. Plant Cell S Lopato , E Waigmann , A Barta	1996-12-01	RSP31, RSP35, ATRSP41

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