| Type | Description |
|---|---|
| Definition | ribosome recycling factor, chloroplast precursor |
| Date | Results | Publications |
|---|---|---|
| 2010-09-06 12:20:00 | Map-based cloning revealed a mutant containing a tandem repeat of part of the sequence (including 116 nucleotides from 631 to 746 bp downstream of the ATG) of At3g63190, which encodes a chloroplast ribosome recycling factor homologue and was named AtcpRRF | 20521084 |
| Type | IDs |
|---|---|
| Synonymous | ''ribosome recycling factor, Arabidopsis thaliana chloroplast ribosome recycling factor, AtcpRRF, HFP108, HIGH CHLOROPHYLL FLUORESCENCE AND PALE GREEN MUTANT 108, chloroplast precursor, chloroplast precursor'', chloroplast ribosome recycling factor, cpRRF, ribosome recycling factor |
| Gene |
UniProtKB-ID:
RRFC_ARATH
UniprotKB:
Q9M1X0
UniParc:
UPI000000BD8D
EMBL:
AY056778,
AL138648,
AY092982,
CP002686,
BT002678,
AF372883
EnsemblGenome:
AT3G63190
KO:
ath:AT3G63190
|
| Nucleutide sequences |
EMBL-CDS:
AEE80446.1,
AAO11594.1,
AAM12981.1,
CAB86420.1,
AAK49599.1,
AAL09724.1
Gene_ORFName:
F16M2_40
EnsemblGenome_TRS:
AT3G63190.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT3G63190.1
RefSeq:
NP_567141.1
|
| Others |
UniRef100:
UniRef100_Q9M1X0
UniRef90:
UniRef90_Q9M1X0
UniRef50:
UniRef50_Q9M1X0
UniGene:
At.19134
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 28887381 |
Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. Mol Cell Proteomics Zachary McBride , Donglai Chen , Christy Reick , Jun Xie , Daniel B Szymanski |
2017-11-01 | - |
| 25387881 |
A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Plant Cell Sascha Waidmann , Branislav Kusenda , Juliane Mayerhofer , Karl Mechtler , Claudia Jonak |
2014-11-01 |
AT1G55207,
AT3G41762,
AT1G48325,
AT2G07600,
LCR60,
AT3G07030,
AT4G11393,
AT4G06474,
AT4G06477,
AT1G27752,
AT1G55205,
AT4G11845,
AT2G39435,
AT2G27936,
AT2G01240,
AT2G05920,
HEN2,
NAD-ME1,
ROC3,
AT2G16900,
AT2G16940,
TRN1,
AT2G17110,
SR1,
CLPB4,
AT2G26230,
AT2G28540,
AT2G28605,
FAD3,
FC2,
CLE7,
AT2G32170,
NUDT22,
VSR5,
AT2G36810,
AT2G37520,
AT2G42480,
RPL16A,
AT2G44640,
CHL-CPN10,
AT2G44670,
CKI1,
SCC3,
AT3G04600,
PAPS3,
AT3G08670,
AT3G09440,
AT3G09550,
AT3G09670,
SS2,
BIG,
ROPGEF13,
AT3G17850,
MBD9,
AT3G19553,
AT3G24180,
AT3G25510,
AT3G27180,
AT3G29170,
AT3G30320,
AT3G43670,
NIT1,
HDA3,
AT3G47830,
AT3G51050,
AT3G55940,
NRPA1,
CER7,
RRF,
AT4G09340,
AT4G11810,
PLDGAMMA1,
AT4G12050,
ORP2B,
AT4G14230,
CKI1,
AT4G14760,
AT4G15960,
AT4G17140,
SRF8,
GH9B15,
ATR1,
AT4G25210,
FKBP53,
AT4G26630,
AT4G27010,
AT4G30020,
AT4G31350,
FLA5,
AT4G36370,
SFH12,
SRFR1,
SHL1,
AT5G01570,
AT5G06300,
SDG38,
AT5G08540,
CIPK5,
AT5G14460
|
| 25293756 |
A proteomic strategy for global analysis of plant protein complexes. Plant Cell Uma K Aryal , Yi Xiong , Zachary McBride , Daisuke Kihara , Jun Xie , Mark C Hall , Daniel B Szymanski |
2014-10-01 |
GAPC1,
AT3G05350,
PRMT4B,
RAD23C,
SAHH2,
MEE58,
APP1,
RAD23D,
PRMT4A,
HSP90.1,
HSP81-3,
GAPC2
|
| 24846764 |
J. Proteome Res. Kaori Sako , Yuki Yanagawa , Tomoyuki Kanai , Takeo Sato , Motoaki Seki , Masayuki Fujiwara , Yoichiro Fukao , Junji Yamaguchi |
2014-07-03 |
AT3G21295,
AT2G01250,
AT2G04390,
PAA2,
AT2G09990,
AT2G17190,
AT2G17360,
EMB2296,
AT2G19730,
AT2G20140,
RPN1A,
AT2G25950,
PAG1,
PGY1,
AT2G31610,
AT2G32060,
AT2G32730,
AT2G33800,
AT2G34480,
AT2G36160,
RPL24A,
AT2G37190,
RPS5B,
CAC3,
PDX1L4,
AT2G39390,
RPL23AA,
AT2G40010,
AT2G40510,
AT2G41550,
AT2G41840,
RPL16A,
AT2G43030,
AT2G44120,
AT2G47610,
AT3G04840,
AT3G04920,
RPT5A,
RPL18,
ACLB-1,
AT3G07110,
CHIP,
AT3G08590,
AT3G09200,
AT3G09500,
AT3G09630,
AT3G09680,
CDC48,
MEE34,
AT3G11510,
AT3G11630,
RPS5A,
AT3G12290,
AT3G13580,
ESM1,
PAE2,
AT3G15180,
AT3G15190,
AT3G02080,
AT3G02560,
AT3G18940,
PREP1,
PAC1,
PBD1,
AT3G24830,
ATL5,
AT3G25545,
LTA2,
RPL15,
AT3G26340,
PBB1,
RPL12-A,
AT3G28900,
NIT2,
RPL9,
EMB1080,
NACA2,
AT3G49910,
PSBO2,
PAD1,
ATG2,
CP33,
AT3G52580,
AT3G52960,
STV1,
AT3G53740,
AT3G53870,
PUR5,
AT3G60770,
PBF1,
ROC4,
AT3G62870,
RRF,
AT3G63490,
AT4G10480,
SHM4,
PBD2,
AT4G17560,
AT4G18100
|
| 21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
| 20855607 |
Proc. Natl. Acad. Sci. U.S.A. Nabil Elrouby , George Coupland |
2010-10-05 |
QPT,
AT2G01690,
AT2G07707,
MCM9,
AT2G17150,
AT2G17410,
HA1,
AT2G20560,
SYTA,
SAE2,
MGP1,
AT2G22100,
AT2G22360,
AT2G25510,
AT2G26270,
PDR4,
EIL1,
LOG1,
AT2G30990,
AT2G32600,
AT2G33600,
AT2G35390,
UBQ7,
LOS2,
AT2G38580,
CYT1,
DPE2,
GPDHC1,
AT2G41840,
AT2G43210,
AT2G44060,
AT3G05670,
AT3G06450,
AT3G06660,
SCN1,
AAC1,
AT3G09440,
AT3G09500,
EIF3G1,
BIG,
ITN1,
HSP70,
AT3G13225,
ATBRXL2,
PAP1,
AT3G16670,
MTO3,
AT3G17900,
LBD41,
KIN10,
VRN1,
PSBTN,
AT3G22970,
HCF101,
ICE1,
PTAC16,
AT3G47370,
AT3G47836,
AT3G47890,
BCS1,
LTA3,
UBQ1,
PIP2A,
AT3G53870,
AT3G54200,
PMR6,
PAT2,
AT3G55520,
SCE1,
AT3G58050,
AT3G61380,
ATERDJ3B,
RRF,
AT4G08900,
AT4G12780,
ADA2B,
G2484-1,
AT4G18670,
CMT2,
TOC159,
AT4G00870,
AT4G23470,
SGT1A,
AT4G23670,
AT4G23730,
cpHsc70-1,
CHLM,
FIB2,
AT4G25730,
SUMO1,
PPI1,
AT4G27980,
RPT2a,
emb2726,
HXK1,
SNF7.1,
VEL1,
AT4G31210,
AT4G34140
|
| 20521084 |
Plant Mol. Biol. Liyuan Wang , Min Ouyang , Qiannan Li , Meijuan Zou , Jinkui Guo , Jinfang Ma , Congming Lu , Lixin Zhang |
2010-09-01 | - |
| 20061580 |
Mol Cell Proteomics Myriam Ferro , Sabine Brugière , Daniel Salvi , Daphné Seigneurin-Berny , Magali Court , Lucas Moyet , Claire Ramus , Stéphane Miras , Mourad Mellal , Sophie Le Gall , Sylvie Kieffer-Jaquinod , Christophe Bruley , Jérôme Garin , Jacques Joyard , Christophe Masselon , Norbert Rolland |
2010-06-01 | - |
| 19857612 |
Proteomics of the response of Arabidopsis thaliana to infection with Alternaria brassicicola. J Proteomics Arup K Mukherjee , Marie-Jeanne Carp , Rina Zuchman , Tamar Ziv , Benjamin A Horwitz , Shimon Gepstein |
2010-02-10 |
AT2G22230,
PR4,
AT3G15356,
CA1,
PBF1,
RRF,
OSM34,
AT4G16260,
PCK1,
AT5G38900,
AT5G42740,
SAG12,
AT5G58260,
FNR2,
GSTF7
|
| 20018591 |
Plant Physiol. Yew-Foon Tan , Nicholas O'Toole , Nicolas L Taylor , A Harvey Millar |
2010-02-01 |
AT2G04400,
ACO3,
MOD1,
AT2G07698,
AT2G07707,
NAD-ME1,
ALDH6B2,
AT2G19940,
AT2G20420,
MGP1,
AT2G27730,
GSTF9,
GSTF10,
ASP1,
ATP3,
HSP60-2,
AT2G34590,
AT2G36460,
AT2G36950,
AT2G37190,
AT2G37660,
BIO2,
ATCS,
GAPC1,
AT3G06790,
BCE2,
AAC1,
AT3G09200,
MSD1,
CYSB,
SERAT2;2,
AT3G13930,
AT3G15000,
mMDH2,
AT3G15640,
AT3G16700,
mtLPD2,
MPPBETA,
AT3G03100,
AT3G03060,
POP2,
AT3G23940,
HSP60,
AT3G26760,
SDH2-1,
AT3G28700,
CYP702A8,
AT3G45740,
AT3G45770,
AT3G46870,
ATPQ,
AT3G52930,
GR,
PUR5,
AT3G55410,
TPI,
AT3G58610,
OASC,
CYSC1,
PANB2,
AT3G62530,
RRF,
RFNR1,
AT4G05400,
AT4G08870,
AT4G08900,
CYTC-2,
NDPK3,
AT4G12340,
GR-RBP2,
AT4G15940,
AT4G02580,
AT4G02930,
NAD-ME2,
AT4G23620,
AT4G23900,
AR192,
AT4G26910,
ACO2,
AT4G27585,
HXK1,
AT4G32610,
SQD1,
AGD2,
MCCB,
CAT2,
IDH1,
ACO1,
AT4G36580,
mtHsc70-1,
AGT2,
SIR,
GDH2,
AT5G08300,
AT5G08670,
AT5G10860,
AT5G11770,
AT5G12040,
AT5G12100
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
{{aff.value}} |
{{aff.size}} |
目前还没有研究热点单位
| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
{{author.value}} |
{{author.size}} |
目前还没有研究热点人员