AT3G62940 - Cysteine proteinases superfamily protein-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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825469 AT3G62940

基因描述

Type	Description
Definition	Cysteine proteinases superfamily protein

研究结论

Date	Results	Publications
2019-04-13 10:03:00	OTU5 is involved in the interpretation of environmental information, probably by altering chromatin organization and maintaining redox homeostasis.OTU5 is a negative regulator of root hair morphogenesis acting independently of	29301952
2018-08-11 10:14:00	The effect of DNA methylation and histone methylation on the activity of a subset of Pi-responsive genes, especially OTU5, was studied.	29061907

名称对应

Type	IDs
Synonymous	OTU5, ovarian tumor domain (OTU)-containing DUB (deubiquitilating enzyme) 5
Gene	UniProtKB-ID: OTU5_ARATH, A0A384LMN3_ARATH, A0A384K877_ARATH UniprotKB: Q9LYC7, A0A384LMN3, A0A384K877 UniParc: UPI00000A8662, UPI00000A8785 EMBL: AK316676, CACRSJ010000106, AY085474, CP002686, AL163816, LUHQ01000003, AY062840, JQ013449, AY081578, JQ013450 EnsemblGenome: AT3G62940 KO: ath:AT3G62940
Nucleutide sequences	EMBL-CDS: AAM10140.1, AFS88952.1, AEE80415.1, ANM63749.1, AEE80413.1, AEE80414.1, BAH19404.1, AAM62700.1, AFS88953.1, AAL32918.1, ANM63748.1, CAB87739.1, VYS61248.1, OAP04926.1, OAP04927.1 Gene_ORFName: T20O10.40, AN1_LOCUS16681 EnsemblGenome_TRS: AT3G62940.1, AT3G62940.4, AT3G62940.3, AT3G62940.5, AT3G62940.2
Protein sequencees	EnsemblGenome_PRO: AT3G62940.4, AT3G62940.1, AT3G62940.2, AT3G62940.5, AT3G62940.3 RefSeq: NP_001325819.1, NP_001325820.1, NP_850739.1, NP_001190165.1, NP_191853.1
Others	UniRef100: UniRef100_Q9LYC7 UniRef90: UniRef90_Q9LYC7 UniRef50: UniRef50_Q9LYC7 UniGene: At.27217

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
29301952	The Deubiquitinase OTU5 Regulates Root Responses to Phosphate Starvation. Plant Physiol. Der-Fen Suen , Yi-Hsiu Tsai , Ya-Tan Cheng , Ramalingam Radjacommare , Ram Nivas Ahirwar , Hongyong Fu , Wolfgang Schmidt	2018-03-01	-
29061907	Deubiquitinating Enzyme OTU5 Contributes to DNA Methylation Patterns and Is Critical for Phosphate Nutrition Signals. Plant Physiol. Ming-Ren Yen , Der-Fen Suen , Fei-Man Hsu , Yi-Hsiu Tsai , Hongyong Fu , Wolfgang Schmidt , Pao-Yang Chen	2017-12-01	-
28887381	Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. Mol Cell Proteomics Zachary McBride , Donglai Chen , Christy Reick , Jun Xie , Daniel B Szymanski	2017-11-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
21166475	Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J. Proteome Res. Jun Ito , Tanveer S Batth , Christopher J Petzold , Alyssa M Redding-Johanson , Aindrila Mukhopadhyay , Robert Verboom , Etienne H Meyer , A Harvey Millar , Joshua L Heazlewood	2011-04-01	AT3G08943, AT3G08947, AT3G07030, AT3G42170, AT4G22285, AT1G24800, AT1G25055, AT1G24881, AT1G25211, AT2G01250, AT2G01690, GSTZ1, AT2G02400, AL6, CAND1, UBC2, GEK1, AT2G03820, CR88, AT2G04390, AT2G04400, AT2G04520, AT2G05220, ACO3, AT2G05920, HEN2, PFD1, AT2G07360, AT2G09990, ABH1, DRP3B, PIP, UGT73B4, NIR1, SQN, AT2G15860, HB1, THY-1, PAP10, MCM4, AT2G16485, ASE1, ROC3, MSI2, UBC23, AT2G16940, TRN1, DSK2, AT2G17280, CPK6, AT2G17360, NTRA, AT2G17930, ATSLY1, EMB2296, PIN1AT, AT2G18110, AT2G18220, COAD, TPS11, AT2G18740, NAP1;2, FVE, CDA1, PRMT1A, PRF1, AT2G20140, CLASP, RPN1A, AT2G20760, AT2G21130, TIM, AT2G21250, UFD1, AT2G21390, CCR2, AT2G22125, AAT, AT2G22420, GEM, SNRK2.9, AT2G23070, PAB4, AT2G23820, SNRNP-G, eIFiso4G2, AT2G24190, AT2G24200, AT2G24590, MAPR2, AT2G25670, AT2G25970, SEH, FUS12, PAG1, CAM5, AGO4, SE, AAO3
11130713	Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Nature M Salanoubat , K Lemcke , M Rieger , W Ansorge , M Unseld , B Fartmann , G Valle , H BlÃ¶cker , M Perez-Alonso , B Obermaier , M Delseny , M Boutry , L A Grivell , R Mache , P PuigdomÃ¨nech , V De Simone , N Choisne , F Artiguenave , C Robert , P Brottier , P Wincker , L Cattolico , J Weissenbach , W Saurin , F QuÃ©tier , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , V Benes , E Wurmbach , H Drzonek , H Erfle , N Jordan , S Bangert , R Wiedelmann , H Kranz , H Voss , R Holland , P Brandt , G Nyakatura , A Vezzi , M D'Angelo , A Pallavicini , S Toppo , B Simionati , A Conrad , K Hornischer , G Kauer , T H LÃ¶hnert , G Nordsiek , J Reichelt , M Scharfe , O SchÃ¶n , M Bargues , J Terol , J Climent , P Navarro , C Collado , A Perez-Perez , B OttenwÃ¤lder , D Duchemin , R Cooke , M Laudie , C Berger-Llauro , B Purnelle , D Masuy , M de Haan , A C Maarse , J P Alcaraz , A Cottet , E Casacuberta , A Monfort , A Argiriou , M flores , R Liguori , D Vitale , G Mannhaupt , D Haase , H Schoof , S Rudd , P Zaccaria , H W Mewes , K F Mayer , S Kaul , C D Town , H L Koo , L J Tallon , J Jenkins , T Rooney , M Rizzo , A Walts , T Utterback , C Y Fujii , T P Shea , T H Creasy , B Haas , R Maiti , D Wu , J Peterson , S Van Aken , G Pai , J Militscher , P Sellers , J E Gill , T V Feldblyum , D Preuss , X Lin , W C Nierman , S L Salzberg , O White , J C Venter , C M Fraser , T Kaneko , Y Nakamura , S Sato , T Kato , E Asamizu , S Sasamoto , T Kimura , K Idesawa , K Kawashima , Y Kishida , C Kiyokawa , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Tabata , European Union Chromosome 3 Arabidopsis Sequencing Consortium , Institute for Genomic Research , Kazusa DNA Research Institute	2000-12-14	AT3G49142, AT3G13898, AT3G21351, AT3G41762, AT3G02645, AT3G01311, AT3G01325, AT3G01345, AT3G01435, AT3G05725, AT3G05937, AT3G06435, AT3G07425, AT3G09032, AT3G09162, AT3G10815, SAG20, AT3G11385, PRA1.A3, AT3G11405, AT3G13857, AT3G15358, AT3G15395, AT3G16895, AT3G22415, AT3G28857, MIF2, AT3G43583, AT3G44785, AT3G47675, AT3G47965, AT3G49307, AT3G51325, AT3G52105, RTFL1, AT3G54450, AT3G54826, AT3G19184, AT3G20557, AT3G08943, AT3G08947, AT3G04545, AT3G09190, AT3G05727, AT3G07030, LCR56, LCR55, AT3G05327, GRP5, AT3G13882, AT3G01323, AT3G04903, AT3G12915, AT3G12977, AT3G17155, LCR41, AT3G11773, LCR44, AT3G10195, AT3G12345, AT3G05741, LCR43, LCR18, AT3G13403, CYP705A28, AT3G21945, AT3G22053, AT3G22057, AT3G23145, LCR42, LCR39, AT3G23450, SCRL13, SCRL12, AT3G23955, AT3G24068, AT3G24093, AT3G24508, AT3G24513, LCR4, AT3G25597, SCRL19, AT3G27831, AT3G27835, AT3G27906, AT3G29255, AT3G30805, AT3G32047, AT3G33187, AT3G42170, LCR47, LCR33, AT3G43148, LCR30, AT3G43833, AT3G44326, AT3G45093, AT3G45577, LCR48

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