bHLH38 - basic helix-loop-helix (bHLH) DNA-binding superfamily protein-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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824864 bHLH38

基因描述

Type	Description
Definition	basic helix-loop-helix (bHLH) DNA-binding superfamily protein

研究结论

Date	Results	Publications
2010-01-21 00:00:00	AtbHLH38 and AtbHLH39 are induced under iron deficiency. They are involved in the iron deficiency induced synthesis and excretion of riboflavin or vitamin B2. [AtbHLH38]	17260143

名称对应

Type	IDs
Synonymous	BHLH038, OBP3-RESPONSIVE GENE 3, ORG2, T8M16.7, basic helix-loop-helix 38
Gene	UniProtKB-ID: ORG2_ARATH UniprotKB: Q9M1K1 UniParc: UPI00000AAD52 EMBL: AL138655, AK221542, AF488576, CP002686, BT026419 EnsemblGenome: AT3G56970 KO: ath:AT3G56970
Nucleutide sequences	EMBL-CDS: CAB72167.1, AEE79594.1, ABH04526.1, BAD94899.1, AAM10940.1 Gene_ORFName: F24I3.50 EnsemblGenome_TRS: AT3G56970.1
Protein sequencees	EnsemblGenome_PRO: AT3G56970.1 RefSeq: NP_191256.1
Others	UniRef100: UniRef100_Q9M1K1 UniRef90: UniRef90_Q9M1K1 UniRef50: UniRef50_Q9M1K0 UniGene: At.34879

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
28650476	CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Nat. Methods Shelly A Trigg , Renee M Garza , Andrew MacWilliams , Joseph R Nery , Anna Bartlett , Rosa Castanon , Adeline Goubil , Joseph Feeney , Ronan O'Malley , Shao-Shan C Huang , Zhuzhu Z Zhang , Mary Galli , Joseph R Ecker	2017-08-01	-
22983953	Requirement and functional redundancy of Ib subgroup bHLH proteins for iron deficiency responses and uptake in Arabidopsis thaliana. Mol Plant Ning Wang , Yan Cui , Yi Liu , Huajie Fan , Juan Du , Zongan Huang , Youxi Yuan , Huilan Wu , Hong-Qing Ling	2013-03-01	FRU, BHLH100, BHLH038, BHLH039, BHLH101
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
18268542	FIT interacts with AtbHLH38 and AtbHLH39 in regulating iron uptake gene expression for iron homeostasis in Arabidopsis. Cell Res. Youxi Yuan , Huilan Wu , Ning Wang , Jie Li , Weina Zhao , Juan Du , Daowen Wang , Hong-Qing Ling	2008-03-01	FRU, BHLH038, BHLH039, IRT1, FRO2
17516080	Iron deficiency-mediated stress regulation of four subgroup Ib BHLH genes in Arabidopsis thaliana. Planta Hong-Yu Wang , Marco Klatte , Marc Jakoby , Helmut BÃ¤umlein , Bernd Weisshaar , Petra Bauer	2007-09-01	BHLH100, BHLH038, BHLH039, BHLH101
17260143	Iron assimilation and transcription factor controlled synthesis of riboflavin in plants. Planta A Vorwieger , C Gryczka , A Czihal , D Douchkov , J Tiedemann , H-P Mock , M Jakoby , B Weisshaar , I Saalbach , H BÃ¤umlein	2007-06-01	-
12679534	The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. Mol Biol Evol Marc A Heim , Marc Jakoby , Martin Werber , Cathie Martin , Bernd Weisshaar , Paul C Bailey	2003-05-01	-
11118137	Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science J L Riechmann , J Heard , G Martin , L Reuber , C Jiang , J Keddie , L Adam , O Pineda , O J Ratcliffe , R R Samaha , R Creelman , M Pilgrim , P Broun , J Z Zhang , D Ghandehari , B K Sherman , G Yu	2000-12-15	-
11130713	Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Nature M Salanoubat , K Lemcke , M Rieger , W Ansorge , M Unseld , B Fartmann , G Valle , H BlÃ¶cker , M Perez-Alonso , B Obermaier , M Delseny , M Boutry , L A Grivell , R Mache , P PuigdomÃ¨nech , V De Simone , N Choisne , F Artiguenave , C Robert , P Brottier , P Wincker , L Cattolico , J Weissenbach , W Saurin , F QuÃ©tier , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , V Benes , E Wurmbach , H Drzonek , H Erfle , N Jordan , S Bangert , R Wiedelmann , H Kranz , H Voss , R Holland , P Brandt , G Nyakatura , A Vezzi , M D'Angelo , A Pallavicini , S Toppo , B Simionati , A Conrad , K Hornischer , G Kauer , T H LÃ¶hnert , G Nordsiek , J Reichelt , M Scharfe , O SchÃ¶n , M Bargues , J Terol , J Climent , P Navarro , C Collado , A Perez-Perez , B OttenwÃ¤lder , D Duchemin , R Cooke , M Laudie , C Berger-Llauro , B Purnelle , D Masuy , M de Haan , A C Maarse , J P Alcaraz , A Cottet , E Casacuberta , A Monfort , A Argiriou , M flores , R Liguori , D Vitale , G Mannhaupt , D Haase , H Schoof , S Rudd , P Zaccaria , H W Mewes , K F Mayer , S Kaul , C D Town , H L Koo , L J Tallon , J Jenkins , T Rooney , M Rizzo , A Walts , T Utterback , C Y Fujii , T P Shea , T H Creasy , B Haas , R Maiti , D Wu , J Peterson , S Van Aken , G Pai , J Militscher , P Sellers , J E Gill , T V Feldblyum , D Preuss , X Lin , W C Nierman , S L Salzberg , O White , J C Venter , C M Fraser , T Kaneko , Y Nakamura , S Sato , T Kato , E Asamizu , S Sasamoto , T Kimura , K Idesawa , K Kawashima , Y Kishida , C Kiyokawa , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Tabata , European Union Chromosome 3 Arabidopsis Sequencing Consortium , Institute for Genomic Research , Kazusa DNA Research Institute	2000-12-14	AT3G49142, AT3G13898, AT3G21351, AT3G41762, AT3G02645, AT3G01311, AT3G01325, AT3G01345, AT3G01435, AT3G05725, AT3G05937, AT3G06435, AT3G07425, AT3G09032, AT3G09162, AT3G10815, SAG20, AT3G11385, PRA1.A3, AT3G11405, AT3G13857, AT3G15358, AT3G15395, AT3G16895, AT3G22415, AT3G28857, MIF2, AT3G43583, AT3G44785, AT3G47675, AT3G47965, AT3G49307, AT3G51325, AT3G52105, RTFL1, AT3G54450, AT3G54826, AT3G19184, AT3G20557, AT3G08943, AT3G08947, AT3G04545, AT3G09190, AT3G05727, AT3G07030, LCR56, LCR55, AT3G05327, GRP5, AT3G13882, AT3G01323, AT3G04903, AT3G12915, AT3G12977, AT3G17155, LCR41, AT3G11773, LCR44, AT3G10195, AT3G12345, AT3G05741, LCR43, LCR18, AT3G13403, CYP705A28, AT3G21945, AT3G22053, AT3G22057, AT3G23145, LCR42, LCR39, AT3G23450, SCRL13, SCRL12, AT3G23955, AT3G24068, AT3G24093, AT3G24508, AT3G24513, LCR4, AT3G25597, SCRL19, AT3G27831, AT3G27835, AT3G27906, AT3G29255, AT3G30805, AT3G32047, AT3G33187, AT3G42170, LCR47, LCR33, AT3G43148, LCR30, AT3G43833, AT3G44326, AT3G45093, AT3G45577, LCR48

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