PPD6 - thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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824832 PPD6

基因描述

Type	Description
Definition	thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)

研究结论

Date	Results	Publications
2012-05-12 11:11:00	crystals of PPD6 belonged to space group P2(1), with unit-cell parameters a = 47.0, b = 64.3, c = 62.0 A, beta = 94.2 degrees , and diffracted to a maximum d-spacing of 2.1 A	22442221

名称对应

Type	IDs
Synonymous	PsbP-domain protein 6
Gene	UniProtKB-ID: PPD6_ARATH, A0A384KSV2_ARATH, B9DH49_ARATH UniprotKB: Q9LXX5, A0A384KSV2, B9DH49 UniParc: UPI00000A6DA4 EMBL: CP002686, LUHQ01000003, CACRSJ010000106, CACSHJ010000089, AL163972, AK228723, AK317395 EnsemblGenome: AT3G56650 KO: ath:AT3G56650
Nucleutide sequences	EMBL-CDS: AEE79548.1, CAB88068.1, BAF00625.1, CAA0386829.1, OAP03914.1, VYS60607.1, BAH20066.1 Gene_ORFName: T5P19.300, AN1_LOCUS16042, C24_LOCUS15924 EnsemblGenome_TRS: AT3G56650.1
Protein sequencees	EnsemblGenome_PRO: AT3G56650.1 RefSeq: NP_191224.1
Others	UniRef100: UniRef100_Q9LXX5 UniRef90: UniRef90_Q9LXX5 UniRef50: UniRef50_Q9LXX5 UniGene: At.34911

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
28887381	Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. Mol Cell Proteomics Zachary McBride , Donglai Chen , Christy Reick , Jun Xie , Daniel B Szymanski	2017-11-01	-
25293756	A proteomic strategy for global analysis of plant protein complexes. Plant Cell Uma K Aryal , Yi Xiong , Zachary McBride , Daisuke Kihara , Jun Xie , Mark C Hall , Daniel B Szymanski	2014-10-01	GAPC1, AT3G05350, PRMT4B, RAD23C, SAHH2, MEE58, APP1, RAD23D, PRMT4A, HSP90.1, HSP81-3, GAPC2
22442221	Purification, crystallization and preliminary X-ray analysis of PPD6, a PsbP-domain protein from Arabidopsis thaliana. Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. Michael Hall , Thomas Kieselbach , Uwe H Sauer , Wolfgang P SchrÃ¶der	2012-03-01	AT3G56650
20061580	AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Mol Cell Proteomics Myriam Ferro , Sabine BrugiÃ¨re , Daniel Salvi , DaphnÃ© Seigneurin-Berny , Magali Court , Lucas Moyet , Claire Ramus , StÃ©phane Miras , Mourad Mellal , Sophie Le Gall , Sylvie Kieffer-Jaquinod , Christophe Bruley , JÃ©rÃ´me Garin , Jacques Joyard , Christophe Masselon , Norbert Rolland	2010-06-01	-
20049866	Thioredoxin targets of the plant chloroplast lumen and their implications for plastid function. Proteomics Michael Hall , Alejandro Mata-Cabana , Hans-Erik Akerlund , Francisco J Florencio , Wolfgang P SchrÃ¶der , Marika Lindahl , Thomas Kieselbach	2010-03-01	AT2G44920, ATPRX Q, PSBO2, AT3G56650, APX4, FKBP13, AT5G53490, PSBO1, NPQ1
18633119	Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Plant Physiol Heidi Rutschow , A Jimmy Ytterberg , Giulia Friso , Robert Nilsson , Klaas J van Wijk	2008-09-01	-
18431481	Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. PLoS One Boris Zybailov , Heidi Rutschow , Giulia Friso , Andrea Rudella , Olof Emanuelsson , Qi Sun , Klaas J van Wijk	2008-04-23	-
11719511	Proteome map of the chloroplast lumen of Arabidopsis thaliana. J Biol Chem Maria Schubert , Ulrika A Petersson , Brian J Haas , Christiane Funk , Wolfgang P SchrÃ¶der , Thomas Kieselbach	2002-03-08	-
11826309	Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. Plant Cell Jean-BenoÃ®t Peltier , Olof Emanuelsson , DÃ¡rio E Kalume , Jimmy Ytterberg , Giulia Friso , Andrea Rudella , David A Liberles , Linda SÃ¶derberg , Peter Roepstorff , Gunnar von Heijne , Klaas J van Wijk	2002-01-01	-
11130713	Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Nature M Salanoubat , K Lemcke , M Rieger , W Ansorge , M Unseld , B Fartmann , G Valle , H BlÃ¶cker , M Perez-Alonso , B Obermaier , M Delseny , M Boutry , L A Grivell , R Mache , P PuigdomÃ¨nech , V De Simone , N Choisne , F Artiguenave , C Robert , P Brottier , P Wincker , L Cattolico , J Weissenbach , W Saurin , F QuÃ©tier , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , V Benes , E Wurmbach , H Drzonek , H Erfle , N Jordan , S Bangert , R Wiedelmann , H Kranz , H Voss , R Holland , P Brandt , G Nyakatura , A Vezzi , M D'Angelo , A Pallavicini , S Toppo , B Simionati , A Conrad , K Hornischer , G Kauer , T H LÃ¶hnert , G Nordsiek , J Reichelt , M Scharfe , O SchÃ¶n , M Bargues , J Terol , J Climent , P Navarro , C Collado , A Perez-Perez , B OttenwÃ¤lder , D Duchemin , R Cooke , M Laudie , C Berger-Llauro , B Purnelle , D Masuy , M de Haan , A C Maarse , J P Alcaraz , A Cottet , E Casacuberta , A Monfort , A Argiriou , M flores , R Liguori , D Vitale , G Mannhaupt , D Haase , H Schoof , S Rudd , P Zaccaria , H W Mewes , K F Mayer , S Kaul , C D Town , H L Koo , L J Tallon , J Jenkins , T Rooney , M Rizzo , A Walts , T Utterback , C Y Fujii , T P Shea , T H Creasy , B Haas , R Maiti , D Wu , J Peterson , S Van Aken , G Pai , J Militscher , P Sellers , J E Gill , T V Feldblyum , D Preuss , X Lin , W C Nierman , S L Salzberg , O White , J C Venter , C M Fraser , T Kaneko , Y Nakamura , S Sato , T Kato , E Asamizu , S Sasamoto , T Kimura , K Idesawa , K Kawashima , Y Kishida , C Kiyokawa , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Tabata , European Union Chromosome 3 Arabidopsis Sequencing Consortium , Institute for Genomic Research , Kazusa DNA Research Institute	2000-12-14	AT3G49142, AT3G13898, AT3G21351, AT3G41762, AT3G02645, AT3G01311, AT3G01325, AT3G01345, AT3G01435, AT3G05725, AT3G05937, AT3G06435, AT3G07425, AT3G09032, AT3G09162, AT3G10815, SAG20, AT3G11385, PRA1.A3, AT3G11405, AT3G13857, AT3G15358, AT3G15395, AT3G16895, AT3G22415, AT3G28857, MIF2, AT3G43583, AT3G44785, AT3G47675, AT3G47965, AT3G49307, AT3G51325, AT3G52105, RTFL1, AT3G54450, AT3G54826, AT3G19184, AT3G20557, AT3G08943, AT3G08947, AT3G04545, AT3G09190, AT3G05727, AT3G07030, LCR56, LCR55, AT3G05327, GRP5, AT3G13882, AT3G01323, AT3G04903, AT3G12915, AT3G12977, AT3G17155, LCR41, AT3G11773, LCR44, AT3G10195, AT3G12345, AT3G05741, LCR43, LCR18, AT3G13403, CYP705A28, AT3G21945, AT3G22053, AT3G22057, AT3G23145, LCR42, LCR39, AT3G23450, SCRL13, SCRL12, AT3G23955, AT3G24068, AT3G24093, AT3G24508, AT3G24513, LCR4, AT3G25597, SCRL19, AT3G27831, AT3G27835, AT3G27906, AT3G29255, AT3G30805, AT3G32047, AT3G33187, AT3G42170, LCR47, LCR33, AT3G43148, LCR30, AT3G43833, AT3G44326, AT3G45093, AT3G45577, LCR48

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