| Type | Description |
|---|---|
| Definition | IRREGULAR XYLEM protein (DUF579) |
| Date | Results | Publications |
|---|---|---|
| 2011-08-13 11:36:00 | IRX15 and IRX15-L function in a redundant manner and are involved in xylan biosynthesis. | 21288268 |
| 2011-08-13 10:19:00 | IRK15 and IRK15L are members of the DUF579 gene family essential for normal xylan deposition during secondary cell wall deposition. | 21251108 |
| Type | IDs |
|---|---|
| Synonymous | IRREGULAR XYLEM 15 |
| Gene |
UniProtKB-ID:
IRX15_ARATH
UniprotKB:
Q9SNE5
UniParc:
UPI000009F81F
EMBL:
CP002686,
AL132976,
DQ446752,
DQ653142,
AY087437,
AK221924
EnsemblGenome:
AT3G50220
KO:
ath:AT3G50220
|
| Nucleutide sequences |
EMBL-CDS:
AEE78642.1,
AAM64983.1,
ABK28594.1,
BAD94344.1,
CAB62301.1,
ABE66005.1
Gene_ORFName:
F11C160
EnsemblGenome_TRS:
AT3G50220.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT3G50220.1
RefSeq:
NP_190591.1
|
| Others |
UniRef100:
UniRef100_Q9SNE5
UniRef90:
UniRef90_Q9SNE5
UniRef50:
UniRef50_Q9SNE5
UniGene:
At.1419
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 24833385 |
Border control--a membrane-linked interactome of Arabidopsis. Science Alexander M Jones , Yuanhu Xuan , Meng Xu , Rui-Sheng Wang , Cheng-Hsun Ho , Sylvie Lalonde , Chang Hun You , Maria I Sardi , Saman A Parsa , Erika Smith-Valle , Tianying Su , Keith A Frazer , Guillaume Pilot , Réjane Pratelli , Guido Grossmann , Biswa R Acharya , Heng-Cheng Hu , Cawas Engineer , Florent Villiers , Chuanli Ju , Kouji Takeda , Zhao Su , Qunfeng Dong , Sarah M Assmann , Jin Chen , June M Kwak , Julian I Schroeder , Reka Albert , Seung Y Rhee , Wolf B Frommer |
2014-05-16 |
AT2G01175,
AT2G14255,
AT4G02725,
AT4G13266,
AT3G06435,
AT3G15358,
PUP8,
PUP7,
AT4G18205,
PRA1.C,
AT4G30845,
AT2G01070,
PAP1,
AT2G01210,
AT2G01275,
At17.1,
PIN4,
AT2G01540,
PDLP6,
AT2G01680,
VIT1,
AT2G01820,
PAP7,
PAP8,
AT2G01970,
AT2G02020,
PTR2,
AT2G02170,
UTR1,
AT2G02960,
MGT3,
TX1,
AT2G04050,
AT2G04080,
AT2G04360,
AT2G04480,
AT2G04830,
AT2G05755,
AT2G05940,
PRK2A,
PFD1,
AT2G07749,
AT2G07678,
AT2G12400,
AT2G13290,
SERK5,
RLP19,
AT2G15240,
AT2G15280,
ARFB1A,
FUT10,
COR413-PM1,
AT2G16030,
AT2G16250,
AT2G16530,
AT2G16595,
PIP2;8,
CPK6,
AT2G17350,
ARAC1,
AT2G17860,
AT2G17972,
AT2G18240,
PERK4,
AT2G19130,
FRK1,
TET2,
LCV1,
ALE2,
PIA1,
AT2G20790,
SRF1,
AT2G21160,
AT2G21230,
AT2G21237,
AT2G21500,
AT2G22180,
AT2G22425,
AT2G22930,
AT2G23070,
AT2G23093,
NRAMP3,
AT2G23200,
ATRER1C1,
AT2G23450,
AT2G23680,
AT2G23770,
AT2G23780,
AT2G23790,
CNGC6,
AT2G24040,
AT2G24170,
CYP71B6,
PUP5,
AT2G24230,
AT2G24250,
ATCSLC08,
GLR2.2,
ARF3
|
| 21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
| 21251108 |
Plant J David Brown , Raymond Wightman , Zhinong Zhang , Leonardo D Gomez , Ivan Atanassov , John-Paul Bukowski , Theodora Tryfona , Simon J McQueen-Mason , Paul Dupree , Simon Turner |
2011-05-01 | - |
| 21288268 |
The DUF579 domain containing proteins IRX15 and IRX15-L affect xylan synthesis in Arabidopsis. Plant J. Jacob K Jensen , Hoon Kim , Jean-Christophe Cocuron , Robert Orler , John Ralph , Curtis G Wilkerson |
2011-05-01 |
AT3G50220,
AT5G67210
|
| 11130713 |
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Nature M Salanoubat , K Lemcke , M Rieger , W Ansorge , M Unseld , B Fartmann , G Valle , H Blöcker , M Perez-Alonso , B Obermaier , M Delseny , M Boutry , L A Grivell , R Mache , P Puigdomènech , V De Simone , N Choisne , F Artiguenave , C Robert , P Brottier , P Wincker , L Cattolico , J Weissenbach , W Saurin , F Quétier , M Schäfer , S Müller-Auer , C Gabel , M Fuchs , V Benes , E Wurmbach , H Drzonek , H Erfle , N Jordan , S Bangert , R Wiedelmann , H Kranz , H Voss , R Holland , P Brandt , G Nyakatura , A Vezzi , M D'Angelo , A Pallavicini , S Toppo , B Simionati , A Conrad , K Hornischer , G Kauer , T H Löhnert , G Nordsiek , J Reichelt , M Scharfe , O Schön , M Bargues , J Terol , J Climent , P Navarro , C Collado , A Perez-Perez , B Ottenwälder , D Duchemin , R Cooke , M Laudie , C Berger-Llauro , B Purnelle , D Masuy , M de Haan , A C Maarse , J P Alcaraz , A Cottet , E Casacuberta , A Monfort , A Argiriou , M flores , R Liguori , D Vitale , G Mannhaupt , D Haase , H Schoof , S Rudd , P Zaccaria , H W Mewes , K F Mayer , S Kaul , C D Town , H L Koo , L J Tallon , J Jenkins , T Rooney , M Rizzo , A Walts , T Utterback , C Y Fujii , T P Shea , T H Creasy , B Haas , R Maiti , D Wu , J Peterson , S Van Aken , G Pai , J Militscher , P Sellers , J E Gill , T V Feldblyum , D Preuss , X Lin , W C Nierman , S L Salzberg , O White , J C Venter , C M Fraser , T Kaneko , Y Nakamura , S Sato , T Kato , E Asamizu , S Sasamoto , T Kimura , K Idesawa , K Kawashima , Y Kishida , C Kiyokawa , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Tabata , European Union Chromosome 3 Arabidopsis Sequencing Consortium , Institute for Genomic Research , Kazusa DNA Research Institute |
2000-12-14 |
AT3G49142,
AT3G13898,
AT3G21351,
AT3G41762,
AT3G02645,
AT3G01311,
AT3G01325,
AT3G01345,
AT3G01435,
AT3G05725,
AT3G05937,
AT3G06435,
AT3G07425,
AT3G09032,
AT3G09162,
AT3G10815,
SAG20,
AT3G11385,
PRA1.A3,
AT3G11405,
AT3G13857,
AT3G15358,
AT3G15395,
AT3G16895,
AT3G22415,
AT3G28857,
MIF2,
AT3G43583,
AT3G44785,
AT3G47675,
AT3G47965,
AT3G49307,
AT3G51325,
AT3G52105,
RTFL1,
AT3G54450,
AT3G54826,
AT3G19184,
AT3G20557,
AT3G08943,
AT3G08947,
AT3G04545,
AT3G09190,
AT3G05727,
AT3G07030,
LCR56,
LCR55,
AT3G05327,
GRP5,
AT3G13882,
AT3G01323,
AT3G04903,
AT3G12915,
AT3G12977,
AT3G17155,
LCR41,
AT3G11773,
LCR44,
AT3G10195,
AT3G12345,
AT3G05741,
LCR43,
LCR18,
AT3G13403,
CYP705A28,
AT3G21945,
AT3G22053,
AT3G22057,
AT3G23145,
LCR42,
LCR39,
AT3G23450,
SCRL13,
SCRL12,
AT3G23955,
AT3G24068,
AT3G24093,
AT3G24508,
AT3G24513,
LCR4,
AT3G25597,
SCRL19,
AT3G27831,
AT3G27835,
AT3G27906,
AT3G29255,
AT3G30805,
AT3G32047,
AT3G33187,
AT3G42170,
LCR47,
LCR33,
AT3G43148,
LCR30,
AT3G43833,
AT3G44326,
AT3G45093,
AT3G45577,
LCR48
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
{{aff.value}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
{{author.value}} |
{{author.size}} |
目前还没有研究热点人员