| Type | Description |
|---|---|
| Definition | small RNA degrading nuclease 1 |
| Date | Results | Publications |
|---|---|---|
| 2018-12-22 12:33:00 | The SDN1 C-terminal domain adopts an RNA recognition motif fold and is critical for substrate binding and enzymatic processivity of SDN1.SDN1 binds AGO protein PAZ domain and trims the 3' ends of AGO-bound miRNAs. | 30181559 |
| 2017-06-24 10:14:00 | AGO10 reduces miR165/6 accumulation by enhancing its degradation by SDN1 and SDN2 in vivo. | 28231321 |
| 2010-01-21 00:00:00 | findings show that a family of exoribonucleases encoded by SMALL RNA DEGRADING NUCLEASE genes degrades mature miRNAs; SDN1 acts specifically on single-stranded miRNAs in vitro & is sensitive to 2'-O-methyl modification on the 3' terminal ribose of miRNAs | 18787168 |
| Type | IDs |
|---|---|
| Synonymous | small RNA degrading nuclease 1 |
| Gene |
UniProtKB-ID:
SDN1_ARATH,
A0A1I9LRJ2_ARATH,
C0J1J0_ARATH
UniprotKB:
A3KPE8,
A0A1I9LRJ2,
C0J1J0
UniParc:
UPI00084937C2,
UPI0000F2F2E1
EMBL:
AL132978,
CP002686,
BT030315,
EU682309
EnsemblGenome:
AT3G50100
KO:
ath:AT3G50100
|
| Nucleutide sequences |
EMBL-CDS:
ABO09879.1,
AEE78626.1,
CAB62118.1,
ANM65200.1,
ACG60893.1
Gene_ORFName:
F3A4.180
EnsemblGenome_TRS:
AT3G50100.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT3G50100.1
RefSeq:
NP_190579.2,
NP_001327187.1
|
| Others |
UniRef100:
UniRef100_A3KPE8
UniRef90:
UniRef90_A3KPE8
UniRef50:
UniRef50_A3KPE8
UniGene:
At.35533
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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