| Type | Description |
|---|---|
| Definition | XH/XS domain-containing protein |
| Date | Results | Publications |
|---|---|---|
| 2017-11-25 15:28:00 | The findings support a model in which IDN2 interacts with RPA and facilitates the release of RPA from single-stranded DNA tails and subsequent recruitment of RAD51 at DSB sites to promote DSB repair. | 28223440 |
| 2013-04-20 13:15:00 | FDM1 interacts with itself and with IDN2. The XH domain of FDM1 mediates the FDM1-FDM1 and FDM1-IDN2 interactions. | 22757778 |
| 2013-01-26 11:17:00 | The paper presents a refined model for the pathway of RNA-directed DNA methylation and transcriptional gene silencing that positions function of IDN2 downstream of siRNA formation and points to an important role for its XH domain. | 22810086 |
| 2012-09-29 10:20:00 | we demonstrated that the previously uncharacterized IDN2 XH domain is required for the IDN2-IDP1/IDP2 complex formation as well as for IDN2 function. IDP1 is required for de novo DNA methylation, siRNA accumulation, and transcriptional gene silencing. | 22570638 |
| 2012-08-25 10:45:00 | Data show that two partially redundant proteins termed IDN2-LIKE 1 (IDNL1; AT1G15910) and IDN2-LIKE 2 (IDNL2; AT4G00380) that are paralogous to INVOLVED IN DE NOVO 2 (IDN2) and that form a stable complex with IDN2 in vivo. | 22592791 |
| Type | IDs |
|---|---|
| Synonymous | INVOLVED IN DE NOVO 2, RDM12, RNA-DIRECTED DNA METHYLATION 12 |
| Gene |
UniProtKB-ID:
IDN2_ARATH,
A0A654FE09_ARATH
UniprotKB:
Q8VZ79,
A0A654FE09
UniParc:
UPI00000AC143
EMBL:
CACRSJ010000106,
AY065184,
CP002686,
BT000136,
AL133315,
CACSHJ010000089
EnsemblGenome:
AT3G48670
KO:
ath:AT3G48670
|
| Nucleutide sequences |
EMBL-CDS:
AAL38360.1,
AEE78443.1,
AEE78442.1,
CAB62356.1,
AAN15455.1,
ANM65088.1,
CAA0385099.1,
VYS59773.1
Gene_ORFName:
T8P19.180,
C24_LOCUS15091,
AN1_LOCUS15211
EnsemblGenome_TRS:
AT3G48670.3,
AT3G48670.2,
AT3G48670.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT3G48670.1,
AT3G48670.2,
AT3G48670.3
RefSeq:
NP_001327083.1,
NP_974403.1,
NP_190436.2
|
| Others |
UniRef100:
UniRef100_Q8VZ79
UniRef90:
UniRef90_Q8VZ79
UniRef50:
UniRef50_Q8VZ79
UniGene:
At.27894
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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