| Type | Description |
|---|---|
| Definition | RNA recognition motif (RRM)-containing protein |
| Date | Results | Publications |
|---|---|---|
| 2017-07-13 15:53:00 | GDS1, a nuclear-speckle-associated Znf, might play a significant role in splicing during plant growth and development. [GDS1] [C3H42] | 27457991 |
| 2017-04-15 12:36:00 | T-DNA inserted gds1 (growth, development and splicing 1) mutant, displayed abnormal growth throughout the lifecycle owing to the reduction of cell size and number. Inverse PCR analysis revealed that the abnormal growth was caused by the disruption of At3g47120, which encodes a C3H42 protein belonging to the C-X7-C-X5-C-X3-H class of the Znf family. | 27457991 |
| Type | IDs |
|---|---|
| Gene |
UniProtKB-ID:
C3H42_ARATH,
A0A1I9LT63_ARATH
UniprotKB:
Q9SD61,
A0A1I9LT63
UniParc:
UPI0008487EA2,
UPI00000ABF3D
EMBL:
AL133292,
BT002472,
BT010369,
CP002686
EnsemblGenome:
AT3G47120
KO:
ath:AT3G47120
|
| Nucleutide sequences |
EMBL-CDS:
AAO00832.1,
AEE78245.1,
AAQ56812.1,
CAB61958.1,
ANM65771.1
Gene_ORFName:
F13I12.170
EnsemblGenome_TRS:
AT3G47120.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT3G47120.1
RefSeq:
NP_190296.1,
NP_001327717.1
|
| Others |
UniRef100:
UniRef100_A0A1I9LT63,
UniRef100_Q9SD61
UniRef90:
UniRef90_Q9SD61
UniRef50:
UniRef50_Q9SD61
UniGene:
At.35841
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 28650476 |
CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Nat. Methods Shelly A Trigg , Renee M Garza , Andrew MacWilliams , Joseph R Nery , Anna Bartlett , Rosa Castanon , Adeline Goubil , Joseph Feeney , Ronan O'Malley , Shao-Shan C Huang , Zhuzhu Z Zhang , Mary Galli , Joseph R Ecker |
2017-08-01 | - |
| 27457991 |
Plant Sci Dae Won Kim , Su Jeong Jeon , Sung Min Hwang , Jong Chan Hong , Jeong Dong Bahk |
2016-09-01 | - |
| 25533953 |
An Arabidopsis gene regulatory network for secondary cell wall synthesis. Nature M Taylor-Teeples , L Lin , M de Lucas , G Turco , T W Toal , A Gaudinier , N F Young , G M Trabucco , M T Veling , R Lamothe , P P Handakumbura , G Xiong , C Wang , J Corwin , A Tsoukalas , L Zhang , D Ware , M Pauly , D J Kliebenstein , K Dehesh , I Tagkopoulos , G Breton , J L Pruneda-Paz , S E Ahnert , S A Kay , S P Hazen , S M Brady |
2015-01-29 | - |
| 21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
| 21798944 |
Evidence for network evolution in an Arabidopsis interactome map. Science Arabidopsis Interactome Mapping Consortium |
2011-07-29 |
AT2G01175,
AT2G24693,
AT2G42395,
AT4G02725,
SCRL10,
AT4G23895,
AT4G25315,
AT4G36515,
AT1G17285,
AT1G30475,
AT3G01435,
AT3G15395,
AT3G47675,
AT3G54826,
AT5G44565,
AT5G52547,
AT4G18205,
ENA,
ORC4,
AT2G01190,
AT2G01250,
RPI2,
MLP329,
RGA1,
AT2G01580,
MEE11,
AT2G01710,
RR14,
VIT1,
PTR2,
AT2G02050,
ETL1,
PP2-B5,
PP2-B10,
AT2G02410,
AL6,
CAND1,
AT2G02570,
PLPB,
UTR1,
AT2G02870,
PKS1,
RNS1,
SPP,
SK16,
FT1,
AT2G03430,
AT2G03500,
AT2G03505,
AT2G03640,
SPR1,
AT2G03870,
CR88,
AT2G04100,
AT2G04230,
AT2G04390,
IBR5,
NRPB6B,
AT2G04650,
AT2G04690,
AT2G04800,
AT2G04900,
AT2G05230,
GRP-3,
ATG8D,
PAA2,
OPR3,
AT2G07738,
MGDC,
AT2G12290,
AGT,
NF-YB7,
AT2G14835,
AT2G14860,
AT2G15270,
ARFB1A,
NRPB3,
NIR1,
PDV2,
THY-1,
BLH7,
AT2G16710,
UBC29,
AT2G16800,
PIP2;8,
AT2G16880,
AT2G16890,
AT2G16900,
AT2G16930,
AT2G17150,
DSK2,
AT2G17350,
AT2G17540,
AT2G17670,
AT2G17760,
BZIP27,
AT2G17880,
AT2G17972,
AT2G18110
|
| 11130713 |
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Nature M Salanoubat , K Lemcke , M Rieger , W Ansorge , M Unseld , B Fartmann , G Valle , H Blöcker , M Perez-Alonso , B Obermaier , M Delseny , M Boutry , L A Grivell , R Mache , P Puigdomènech , V De Simone , N Choisne , F Artiguenave , C Robert , P Brottier , P Wincker , L Cattolico , J Weissenbach , W Saurin , F Quétier , M Schäfer , S Müller-Auer , C Gabel , M Fuchs , V Benes , E Wurmbach , H Drzonek , H Erfle , N Jordan , S Bangert , R Wiedelmann , H Kranz , H Voss , R Holland , P Brandt , G Nyakatura , A Vezzi , M D'Angelo , A Pallavicini , S Toppo , B Simionati , A Conrad , K Hornischer , G Kauer , T H Löhnert , G Nordsiek , J Reichelt , M Scharfe , O Schön , M Bargues , J Terol , J Climent , P Navarro , C Collado , A Perez-Perez , B Ottenwälder , D Duchemin , R Cooke , M Laudie , C Berger-Llauro , B Purnelle , D Masuy , M de Haan , A C Maarse , J P Alcaraz , A Cottet , E Casacuberta , A Monfort , A Argiriou , M flores , R Liguori , D Vitale , G Mannhaupt , D Haase , H Schoof , S Rudd , P Zaccaria , H W Mewes , K F Mayer , S Kaul , C D Town , H L Koo , L J Tallon , J Jenkins , T Rooney , M Rizzo , A Walts , T Utterback , C Y Fujii , T P Shea , T H Creasy , B Haas , R Maiti , D Wu , J Peterson , S Van Aken , G Pai , J Militscher , P Sellers , J E Gill , T V Feldblyum , D Preuss , X Lin , W C Nierman , S L Salzberg , O White , J C Venter , C M Fraser , T Kaneko , Y Nakamura , S Sato , T Kato , E Asamizu , S Sasamoto , T Kimura , K Idesawa , K Kawashima , Y Kishida , C Kiyokawa , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Tabata , European Union Chromosome 3 Arabidopsis Sequencing Consortium , Institute for Genomic Research , Kazusa DNA Research Institute |
2000-12-14 |
AT3G49142,
AT3G13898,
AT3G21351,
AT3G41762,
AT3G02645,
AT3G01311,
AT3G01325,
AT3G01345,
AT3G01435,
AT3G05725,
AT3G05937,
AT3G06435,
AT3G07425,
AT3G09032,
AT3G09162,
AT3G10815,
SAG20,
AT3G11385,
PRA1.A3,
AT3G11405,
AT3G13857,
AT3G15358,
AT3G15395,
AT3G16895,
AT3G22415,
AT3G28857,
MIF2,
AT3G43583,
AT3G44785,
AT3G47675,
AT3G47965,
AT3G49307,
AT3G51325,
AT3G52105,
RTFL1,
AT3G54450,
AT3G54826,
AT3G19184,
AT3G20557,
AT3G08943,
AT3G08947,
AT3G04545,
AT3G09190,
AT3G05727,
AT3G07030,
LCR56,
LCR55,
AT3G05327,
GRP5,
AT3G13882,
AT3G01323,
AT3G04903,
AT3G12915,
AT3G12977,
AT3G17155,
LCR41,
AT3G11773,
LCR44,
AT3G10195,
AT3G12345,
AT3G05741,
LCR43,
LCR18,
AT3G13403,
CYP705A28,
AT3G21945,
AT3G22053,
AT3G22057,
AT3G23145,
LCR42,
LCR39,
AT3G23450,
SCRL13,
SCRL12,
AT3G23955,
AT3G24068,
AT3G24093,
AT3G24508,
AT3G24513,
LCR4,
AT3G25597,
SCRL19,
AT3G27831,
AT3G27835,
AT3G27906,
AT3G29255,
AT3G30805,
AT3G32047,
AT3G33187,
AT3G42170,
LCR47,
LCR33,
AT3G43148,
LCR30,
AT3G43833,
AT3G44326,
AT3G45093,
AT3G45577,
LCR48
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
{{aff.value}} |
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目前还没有研究热点单位
| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
{{author.value}} |
{{author.size}} |
目前还没有研究热点人员