| Type | Description |
|---|---|
| Definition | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| Date | Results | Publications |
|---|---|---|
| 2011-03-11 14:54:00 | AtCAF1a and AtCAF1b regulate abiotic stress responses. However, AtCAF1a and AtCAF1b are not functionally redundant in all cases, nor are they essential for all environmental stresses. AtCAF1b is required for deadenylation of mRNA. [CAF1a] | 19955262 |
| 2010-01-21 00:00:00 | These results suggest roles of the AtCAF1 proteins in regulated mRNA deadenylation and defence responses to pathogen infections.[AtCAF1a] | 19065152 |
| Type | IDs |
|---|---|
| Synonymous | AtCAF1a, CCR4- associated factor 1a |
| Gene |
UniProtKB-ID:
CAF1I_ARATH,
A0A654FI64_ARATH
UniprotKB:
Q9LXM2,
A0A654FI64
UniParc:
UPI00000A8BFB
EMBL:
AY050848,
CP002686,
AL353865,
AY117220,
CACRSJ010000106
EnsemblGenome:
AT3G44260
KO:
ath:AT3G44260
|
| Nucleutide sequences |
EMBL-CDS:
CAB88994.1,
AAK92783.1,
AAM51295.1,
AEE77882.1,
VYS59291.1
Gene_ORFName:
T10D17_50,
AN1_LOCUS14732
EnsemblGenome_TRS:
AT3G44260.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT3G44260.1
RefSeq:
NP_190012.1
|
| Others |
UniRef100:
UniRef100_Q9LXM2
UniRef90:
UniRef90_Q9LXM2
UniRef50:
UniRef50_Q9LXM2
UniGene:
At.1713
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 31093672 |
Identification of Arabidopsis CCR4-NOT Complexes with Pumilio RNA-Binding Proteins, APUM5 and APUM2. Plant Cell Physiol. Toshihiro Arae , Kotone Morita , Riko Imahori , Yuya Suzuki , Shigetaka Yasuda , Takeo Sato , Junji Yamaguchi , Yukako Chiba |
2019-09-01 | - |
| 21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
| 21798944 |
Evidence for network evolution in an Arabidopsis interactome map. Science Arabidopsis Interactome Mapping Consortium |
2011-07-29 |
AT2G01175,
AT2G24693,
AT2G42395,
AT4G02725,
SCRL10,
AT4G23895,
AT4G25315,
AT4G36515,
AT1G17285,
AT1G30475,
AT3G01435,
AT3G15395,
AT3G47675,
AT3G54826,
AT5G44565,
AT5G52547,
AT4G18205,
ENA,
ORC4,
AT2G01190,
AT2G01250,
RPI2,
MLP329,
RGA1,
AT2G01580,
MEE11,
AT2G01710,
RR14,
VIT1,
PTR2,
AT2G02050,
ETL1,
PP2-B5,
PP2-B10,
AT2G02410,
AL6,
CAND1,
AT2G02570,
PLPB,
UTR1,
AT2G02870,
PKS1,
RNS1,
SPP,
SK16,
FT1,
AT2G03430,
AT2G03500,
AT2G03505,
AT2G03640,
SPR1,
AT2G03870,
CR88,
AT2G04100,
AT2G04230,
AT2G04390,
IBR5,
NRPB6B,
AT2G04650,
AT2G04690,
AT2G04800,
AT2G04900,
AT2G05230,
GRP-3,
ATG8D,
PAA2,
OPR3,
AT2G07738,
MGDC,
AT2G12290,
AGT,
NF-YB7,
AT2G14835,
AT2G14860,
AT2G15270,
ARFB1A,
NRPB3,
NIR1,
PDV2,
THY-1,
BLH7,
AT2G16710,
UBC29,
AT2G16800,
PIP2;8,
AT2G16880,
AT2G16890,
AT2G16900,
AT2G16930,
AT2G17150,
DSK2,
AT2G17350,
AT2G17540,
AT2G17670,
AT2G17760,
BZIP27,
AT2G17880,
AT2G17972,
AT2G18110
|
| 19955262 |
Plant Physiol Justin W Walley , Dior R Kelley , Gergana Nestorova , David L Hirschberg , Katayoon Dehesh |
2010-02-01 | - |
| 19065152 |
Cell Res. Wenxing Liang , Changbao Li , Fang Liu , Hongling Jiang , Shuyu Li , Jiaqiang Sun , Xiaoyan Wu , Chuanyou Li |
2009-03-01 | - |
| 17953483 |
Mechanical stress induces biotic and abiotic stress responses via a novel cis-element. PLoS Genet. Justin W Walley , Sean Coughlan , Matthew E Hudson , Michael F Covington , Roy Kaspi , Gopalan Banu , Stacey L Harmer , Katayoon Dehesh |
2007-10-01 |
SYD,
AT2G30020,
MRP4,
AT3G44260,
MPK3,
PP2-A13,
BAP1,
AT1G32920,
AT1G72920,
MKK9,
ORA47,
CML38,
WRKY40
|
| 11130713 |
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Nature M Salanoubat , K Lemcke , M Rieger , W Ansorge , M Unseld , B Fartmann , G Valle , H Blöcker , M Perez-Alonso , B Obermaier , M Delseny , M Boutry , L A Grivell , R Mache , P Puigdomènech , V De Simone , N Choisne , F Artiguenave , C Robert , P Brottier , P Wincker , L Cattolico , J Weissenbach , W Saurin , F Quétier , M Schäfer , S Müller-Auer , C Gabel , M Fuchs , V Benes , E Wurmbach , H Drzonek , H Erfle , N Jordan , S Bangert , R Wiedelmann , H Kranz , H Voss , R Holland , P Brandt , G Nyakatura , A Vezzi , M D'Angelo , A Pallavicini , S Toppo , B Simionati , A Conrad , K Hornischer , G Kauer , T H Löhnert , G Nordsiek , J Reichelt , M Scharfe , O Schön , M Bargues , J Terol , J Climent , P Navarro , C Collado , A Perez-Perez , B Ottenwälder , D Duchemin , R Cooke , M Laudie , C Berger-Llauro , B Purnelle , D Masuy , M de Haan , A C Maarse , J P Alcaraz , A Cottet , E Casacuberta , A Monfort , A Argiriou , M flores , R Liguori , D Vitale , G Mannhaupt , D Haase , H Schoof , S Rudd , P Zaccaria , H W Mewes , K F Mayer , S Kaul , C D Town , H L Koo , L J Tallon , J Jenkins , T Rooney , M Rizzo , A Walts , T Utterback , C Y Fujii , T P Shea , T H Creasy , B Haas , R Maiti , D Wu , J Peterson , S Van Aken , G Pai , J Militscher , P Sellers , J E Gill , T V Feldblyum , D Preuss , X Lin , W C Nierman , S L Salzberg , O White , J C Venter , C M Fraser , T Kaneko , Y Nakamura , S Sato , T Kato , E Asamizu , S Sasamoto , T Kimura , K Idesawa , K Kawashima , Y Kishida , C Kiyokawa , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Tabata , European Union Chromosome 3 Arabidopsis Sequencing Consortium , Institute for Genomic Research , Kazusa DNA Research Institute |
2000-12-14 |
AT3G49142,
AT3G13898,
AT3G21351,
AT3G41762,
AT3G02645,
AT3G01311,
AT3G01325,
AT3G01345,
AT3G01435,
AT3G05725,
AT3G05937,
AT3G06435,
AT3G07425,
AT3G09032,
AT3G09162,
AT3G10815,
SAG20,
AT3G11385,
PRA1.A3,
AT3G11405,
AT3G13857,
AT3G15358,
AT3G15395,
AT3G16895,
AT3G22415,
AT3G28857,
MIF2,
AT3G43583,
AT3G44785,
AT3G47675,
AT3G47965,
AT3G49307,
AT3G51325,
AT3G52105,
RTFL1,
AT3G54450,
AT3G54826,
AT3G19184,
AT3G20557,
AT3G08943,
AT3G08947,
AT3G04545,
AT3G09190,
AT3G05727,
AT3G07030,
LCR56,
LCR55,
AT3G05327,
GRP5,
AT3G13882,
AT3G01323,
AT3G04903,
AT3G12915,
AT3G12977,
AT3G17155,
LCR41,
AT3G11773,
LCR44,
AT3G10195,
AT3G12345,
AT3G05741,
LCR43,
LCR18,
AT3G13403,
CYP705A28,
AT3G21945,
AT3G22053,
AT3G22057,
AT3G23145,
LCR42,
LCR39,
AT3G23450,
SCRL13,
SCRL12,
AT3G23955,
AT3G24068,
AT3G24093,
AT3G24508,
AT3G24513,
LCR4,
AT3G25597,
SCRL19,
AT3G27831,
AT3G27835,
AT3G27906,
AT3G29255,
AT3G30805,
AT3G32047,
AT3G33187,
AT3G42170,
LCR47,
LCR33,
AT3G43148,
LCR30,
AT3G43833,
AT3G44326,
AT3G45093,
AT3G45577,
LCR48
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
{{aff.value}} |
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目前还没有研究热点单位
| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
{{author.value}} |
{{author.size}} |
目前还没有研究热点人员