CHR38 - chromatin remodeling 38-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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823287 CHR38

基因描述

Type	Description
Definition	chromatin remodeling 38

研究结论

Date	Results	Publications
2011-12-31 11:26:00	Data show that SHH1(AT1G15215), RDR2, CLASSY1, and RDM4 were co-purified with NRPD1(At1g63020), the largest subunit of Pol-IV.	21811420
2010-01-21 00:00:00	A SNF2 domain-containing protein (CLASSY1) that acts together with RDR2 and NRPD1a in the spread of transgene silencing and in the production of endogenous 24-nucleotide short interfering RNAs (siRNAs), is identified.[CLSY1]	17526749

名称对应

Type	IDs
Synonymous	CLASSY 1, CLASSY1, CLSY, CLSY1, chromatin remodeling 38
Gene	UniProtKB-ID: CLSY1_ARATH, A0A178VEK9_ARATH, A0A1I9LTS2_ARATH UniprotKB: Q9M297, A0A178VEK9, A0A1I9LTS2 UniParc: UPI00084929C5, UPI00000AB305 EMBL: AL138640, CP002686, LUHQ01000003, CACRSJ010000106 EnsemblGenome: AT3G42670 KO: ath:AT3G42670
Nucleutide sequences	EMBL-CDS: ANM65981.1, CAB86450.1, ANM65979.1, AEE77745.1, VYS59170.1, OAP04326.1, ANM65980.1 Gene_ORFName: T12K4.120, AN1_LOCUS14612 EnsemblGenome_TRS: AT3G42670.1, AT3G42670.3, AT3G42670.2
Protein sequencees	EnsemblGenome_PRO: AT3G42670.1, AT3G42670.3, AT3G42670.2 RefSeq: NP_001327911.1, NP_001327912.1, NP_189853.1, NP_001327910.1
Others	UniRef100: UniRef100_Q9M297, UniRef100_A0A1I9LTS2 UniRef90: UniRef90_A0A1I9LTS2, UniRef90_Q9M297 UniRef50: UniRef50_Q9M297, UniRef50_F4K493 UniGene: At.43953, At.66552

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
29736015	Locus-specific control of the de novo DNA methylation pathway in Arabidopsis by the CLASSY family. Nat. Genet. Ming Zhou , Ana Marie S Palanca , Julie A Law	2018-06-01	-
23637343	DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV. Proc. Natl. Acad. Sci. U.S.A. Heng Zhang , Ze-Yang Ma , Liang Zeng , Kaori Tanaka , Cui-Jun Zhang , Jun Ma , Ge Bai , Pengcheng Wang , Su-Wei Zhang , Zhang-Wei Liu , Tao Cai , Kai Tang , Renyi Liu , Xiaobing Shi , Xin-Jian He , Jian-Kang Zhu	2013-05-14	NRPE3B, NRPB3, NRPD2A, CHR38, RDR2, CHR42, AT1G15215, NRPD1A
21811420	SHH1, a homeodomain protein required for DNA methylation, as well as RDR2, RDM4, and chromatin remodeling factors, associate with RNA polymerase IV. PLoS Genet. Julie A Law , Ajay A Vashisht , James A Wohlschlegel , Steven E Jacobsen	2011-07-01	NRPE3B, NRPB3, RDM4, RPB5D, NRPB9A, NRPB5, NRPD7, NRPD2A, chr40, CHR38, NRPB11, NRPB8B, RDR2, NRPE7, NRPD4, NRPB9B, CHR42, NRPB12, NRPB6A, chr31, NRPB10, AT1G15215, NRPD1A
17526749	An SNF2 protein associated with nuclear RNA silencing and the spread of a silencing signal between cells in Arabidopsis. Plant Cell Lisa M Smith , Olga Pontes , Iain Searle , Nataliya Yelina , Faridoon K Yousafzai , Alan J Herr , Craig S Pikaard , David C Baulcombe	2007-05-01	-
11130713	Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Nature M Salanoubat , K Lemcke , M Rieger , W Ansorge , M Unseld , B Fartmann , G Valle , H BlÃ¶cker , M Perez-Alonso , B Obermaier , M Delseny , M Boutry , L A Grivell , R Mache , P PuigdomÃ¨nech , V De Simone , N Choisne , F Artiguenave , C Robert , P Brottier , P Wincker , L Cattolico , J Weissenbach , W Saurin , F QuÃ©tier , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , V Benes , E Wurmbach , H Drzonek , H Erfle , N Jordan , S Bangert , R Wiedelmann , H Kranz , H Voss , R Holland , P Brandt , G Nyakatura , A Vezzi , M D'Angelo , A Pallavicini , S Toppo , B Simionati , A Conrad , K Hornischer , G Kauer , T H LÃ¶hnert , G Nordsiek , J Reichelt , M Scharfe , O SchÃ¶n , M Bargues , J Terol , J Climent , P Navarro , C Collado , A Perez-Perez , B OttenwÃ¤lder , D Duchemin , R Cooke , M Laudie , C Berger-Llauro , B Purnelle , D Masuy , M de Haan , A C Maarse , J P Alcaraz , A Cottet , E Casacuberta , A Monfort , A Argiriou , M flores , R Liguori , D Vitale , G Mannhaupt , D Haase , H Schoof , S Rudd , P Zaccaria , H W Mewes , K F Mayer , S Kaul , C D Town , H L Koo , L J Tallon , J Jenkins , T Rooney , M Rizzo , A Walts , T Utterback , C Y Fujii , T P Shea , T H Creasy , B Haas , R Maiti , D Wu , J Peterson , S Van Aken , G Pai , J Militscher , P Sellers , J E Gill , T V Feldblyum , D Preuss , X Lin , W C Nierman , S L Salzberg , O White , J C Venter , C M Fraser , T Kaneko , Y Nakamura , S Sato , T Kato , E Asamizu , S Sasamoto , T Kimura , K Idesawa , K Kawashima , Y Kishida , C Kiyokawa , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Tabata , European Union Chromosome 3 Arabidopsis Sequencing Consortium , Institute for Genomic Research , Kazusa DNA Research Institute	2000-12-14	AT3G49142, AT3G13898, AT3G21351, AT3G41762, AT3G02645, AT3G01311, AT3G01325, AT3G01345, AT3G01435, AT3G05725, AT3G05937, AT3G06435, AT3G07425, AT3G09032, AT3G09162, AT3G10815, SAG20, AT3G11385, PRA1.A3, AT3G11405, AT3G13857, AT3G15358, AT3G15395, AT3G16895, AT3G22415, AT3G28857, MIF2, AT3G43583, AT3G44785, AT3G47675, AT3G47965, AT3G49307, AT3G51325, AT3G52105, RTFL1, AT3G54450, AT3G54826, AT3G19184, AT3G20557, AT3G08943, AT3G08947, AT3G04545, AT3G09190, AT3G05727, AT3G07030, LCR56, LCR55, AT3G05327, GRP5, AT3G13882, AT3G01323, AT3G04903, AT3G12915, AT3G12977, AT3G17155, LCR41, AT3G11773, LCR44, AT3G10195, AT3G12345, AT3G05741, LCR43, LCR18, AT3G13403, CYP705A28, AT3G21945, AT3G22053, AT3G22057, AT3G23145, LCR42, LCR39, AT3G23450, SCRL13, SCRL12, AT3G23955, AT3G24068, AT3G24093, AT3G24508, AT3G24513, LCR4, AT3G25597, SCRL19, AT3G27831, AT3G27835, AT3G27906, AT3G29255, AT3G30805, AT3G32047, AT3G33187, AT3G42170, LCR47, LCR33, AT3G43148, LCR30, AT3G43833, AT3G44326, AT3G45093, AT3G45577, LCR48

研究热度

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