HMG - high mobility group-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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822505 HMG

基因描述

Type	Description
Definition	high mobility group

研究结论

Date	Results	Publications
2019-06-01 10:45:00	subunit of the histone chaperone FACT that is required for seed dormancy	30947026
2018-03-31 12:06:00	FACT (SSRP1 and SPT16) is a novel factor required for the accumulation of anthocyanins in response to light-induction.	29332189
2011-11-26 10:35:00	Active DNA demethylation by DEMETER requires SSRP1 function through a distinctly different process from direct DNA methylation control.	21920319
2010-06-28 11:34:00	SPT16 and SSRP1 are critically involved in the regulation of leaf growth, flowering time and seed production, and interact with HUB1/2.	19947984

名称对应

Type	IDs
Synonymous	ATHMG, NFD, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR D, SSRP1, high mobility group
Gene	UniProtKB-ID: SSRP1_ARATH, A0A178VCP0_ARATH UniprotKB: Q05153, A0A178VCP0 UniParc: UPI00019B2666, UPI000000BD84 EMBL: AK318679, AK221855, AP002057, CACSHJ010000089, D13491, CACRSJ010000106, BT002507, LUHQ01000003, CP002686 EnsemblGenome: AT3G28730 KO: ath:AT3G28730
Nucleutide sequences	EMBL-CDS: BAA02719.1, BAD94127.1, BAH56794.1, AEE77484.1, AAO00867.1, BAB03170.1, CAA0384023.1, OAP03105.1, VYS58935.1 Gene_ORFName: T19N8.2, C24_LOCUS14219, AN1_LOCUS14379 EnsemblGenome_TRS: AT3G28730.1
Protein sequencees	EnsemblGenome_PRO: AT3G28730.1 RefSeq: NP_189515.1
Others	UniRef100: UniRef100_Q05153 UniRef90: UniRef90_Q05153 UniRef50: UniRef50_Q05153 UniGene: At.21931, At.48716

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
30947026	The SSRP1 subunit of the histone chaperone FACT is required for seed dormancy in Arabidopsis. J Plant Physiol Philipp Michl-Holzinger , Simon A Mortensen , Klaus D Grasser	2019-05-01	-
29332189	The Arabidopsis histone chaperone FACT is required for stress-induced expression of anthocyanin biosynthetic genes. Plant Mol Biol Alexander Pfab , Matthias Breindl , Klaus D Grasser	2018-03-01	-
28650476	CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Nat. Methods Shelly A Trigg , Renee M Garza , Andrew MacWilliams , Joseph R Nery , Anna Bartlett , Rosa Castanon , Adeline Goubil , Joseph Feeney , Ronan O'Malley , Shao-Shan C Huang , Zhuzhu Z Zhang , Mary Galli , Joseph R Ecker	2017-08-01	-
21920319	HMG domain containing SSRP1 is required for DNA demethylation and genomic imprinting in Arabidopsis. Dev. Cell Yoko Ikeda , Yuki Kinoshita , Daichi Susaki , Yuriko Ikeda , Megumi Iwano , Seiji Takayama , Tetsuya Higashiyama , Tetsuji Kakutani , Tetsu Kinoshita	2011-09-13	HMG, DME
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
19947984	The transcript elongation factor FACT affects Arabidopsis vegetative and reproductive development and genetically interacts with HUB1/2. Plant J. Ihab B Lolas , Kristiina Himanen , Jesper T GrÃ¸nlund , Carina Lynggaard , Andreas Houben , Michael Melzer , Mieke Van Lijsebettens , Klaus D Grasser	2010-02-01	HMG, SPT16
16698901	NUCLEAR FUSION DEFECTIVE1 encodes the Arabidopsis RPL21M protein and is required for karyogamy during female gametophyte development and fertilization. Plant Physiol Michael F Portereiko , Linda Sandaklie-Nikolova , Alan Lloyd , Chad A Dever , Denichiro Otsuga , Gary N Drews	2006-07-01	-
15546350	The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome. Plant J. Meg Duroux , Andreas Houben , Kamil RÅ¯zicka , JirÃ Friml , Klaus D Grasser	2004-12-01	HMG, SPT16
11118137	Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science J L Riechmann , J Heard , G Martin , L Reuber , C Jiang , J Keddie , L Adam , O Pineda , O J Ratcliffe , R R Samaha , R Creelman , M Pilgrim , P Broun , J Z Zhang , D Ghandehari , B K Sherman , G Yu	2000-12-15	-
11130713	Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Nature M Salanoubat , K Lemcke , M Rieger , W Ansorge , M Unseld , B Fartmann , G Valle , H BlÃ¶cker , M Perez-Alonso , B Obermaier , M Delseny , M Boutry , L A Grivell , R Mache , P PuigdomÃ¨nech , V De Simone , N Choisne , F Artiguenave , C Robert , P Brottier , P Wincker , L Cattolico , J Weissenbach , W Saurin , F QuÃ©tier , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , V Benes , E Wurmbach , H Drzonek , H Erfle , N Jordan , S Bangert , R Wiedelmann , H Kranz , H Voss , R Holland , P Brandt , G Nyakatura , A Vezzi , M D'Angelo , A Pallavicini , S Toppo , B Simionati , A Conrad , K Hornischer , G Kauer , T H LÃ¶hnert , G Nordsiek , J Reichelt , M Scharfe , O SchÃ¶n , M Bargues , J Terol , J Climent , P Navarro , C Collado , A Perez-Perez , B OttenwÃ¤lder , D Duchemin , R Cooke , M Laudie , C Berger-Llauro , B Purnelle , D Masuy , M de Haan , A C Maarse , J P Alcaraz , A Cottet , E Casacuberta , A Monfort , A Argiriou , M flores , R Liguori , D Vitale , G Mannhaupt , D Haase , H Schoof , S Rudd , P Zaccaria , H W Mewes , K F Mayer , S Kaul , C D Town , H L Koo , L J Tallon , J Jenkins , T Rooney , M Rizzo , A Walts , T Utterback , C Y Fujii , T P Shea , T H Creasy , B Haas , R Maiti , D Wu , J Peterson , S Van Aken , G Pai , J Militscher , P Sellers , J E Gill , T V Feldblyum , D Preuss , X Lin , W C Nierman , S L Salzberg , O White , J C Venter , C M Fraser , T Kaneko , Y Nakamura , S Sato , T Kato , E Asamizu , S Sasamoto , T Kimura , K Idesawa , K Kawashima , Y Kishida , C Kiyokawa , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Tabata , European Union Chromosome 3 Arabidopsis Sequencing Consortium , Institute for Genomic Research , Kazusa DNA Research Institute	2000-12-14	AT3G49142, AT3G13898, AT3G21351, AT3G41762, AT3G02645, AT3G01311, AT3G01325, AT3G01345, AT3G01435, AT3G05725, AT3G05937, AT3G06435, AT3G07425, AT3G09032, AT3G09162, AT3G10815, SAG20, AT3G11385, PRA1.A3, AT3G11405, AT3G13857, AT3G15358, AT3G15395, AT3G16895, AT3G22415, AT3G28857, MIF2, AT3G43583, AT3G44785, AT3G47675, AT3G47965, AT3G49307, AT3G51325, AT3G52105, RTFL1, AT3G54450, AT3G54826, AT3G19184, AT3G20557, AT3G08943, AT3G08947, AT3G04545, AT3G09190, AT3G05727, AT3G07030, LCR56, LCR55, AT3G05327, GRP5, AT3G13882, AT3G01323, AT3G04903, AT3G12915, AT3G12977, AT3G17155, LCR41, AT3G11773, LCR44, AT3G10195, AT3G12345, AT3G05741, LCR43, LCR18, AT3G13403, CYP705A28, AT3G21945, AT3G22053, AT3G22057, AT3G23145, LCR42, LCR39, AT3G23450, SCRL13, SCRL12, AT3G23955, AT3G24068, AT3G24093, AT3G24508, AT3G24513, LCR4, AT3G25597, SCRL19, AT3G27831, AT3G27835, AT3G27906, AT3G29255, AT3G30805, AT3G32047, AT3G33187, AT3G42170, LCR47, LCR33, AT3G43148, LCR30, AT3G43833, AT3G44326, AT3G45093, AT3G45577, LCR48

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