Type | Description |
---|---|
Definition | nine-cis-epoxycarotenoid dioxygenase 6 |
Date | Results | Publications |
---|---|---|
2011-12-17 11:40:00 | inducing expression of NCED6 during seed development suppressed vivipary, precocious germination of developing seeds | 21969557 |
2010-01-21 00:00:00 | AtNCED6 is required for abscisic acid biosynthesis during seed development. | 16412079 |
Type | IDs |
---|---|
Synonymous | ATNCED6, NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 6, nine-cis-epoxycarotenoid dioxygenase 6 |
Gene |
UniProtKB-ID:
NCED6_ARATH
UniprotKB:
Q9LRM7
UniParc:
UPI000003BCE5
EMBL:
CP002686,
AB028621
EnsemblGenome:
AT3G24220
KO:
ath:AT3G24220
|
Nucleutide sequences |
EMBL-CDS:
AEE76875.1,
BAB01363.1
Gene_ORFName:
MUJ8.12
EnsemblGenome_TRS:
AT3G24220.1
|
Protein sequencees |
EnsemblGenome_PRO:
AT3G24220.1
RefSeq:
NP_189064.1
|
Others |
UniRef100:
UniRef100_Q9LRM7
UniRef90:
UniRef90_Q9LRM7
UniRef50:
UniRef50_Q9LRM7
UniGene:
At.37572
|
{{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
---|---|---|---|---|---|---|---|---|
Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
暂无数据
Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
---|---|---|---|
21969557 |
Induction of 9-cis-epoxycarotenoid dioxygenase in Arabidopsis thaliana seeds enhances seed dormancy. Proc. Natl. Acad. Sci. U.S.A. Cristina MartÃnez-Andújar , M Isabel Ordiz , Zhonglian Huang , Mariko Nonogaki , Roger N Beachy , Hiroyuki Nonogaki |
2011-10-11 |
NCED6
|
21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
17449805 |
Plant Cell Eunkyoo Oh , Shinjiro Yamaguchi , Jianhong Hu , Jikumaru Yusuke , Byunghyuck Jung , Inyup Paik , Hee-Seung Lee , Tai-ping Sun , Yuji Kamiya , Giltsu Choi |
2007-04-01 |
RGA1,
PIL5,
CYP707A2,
EXP3,
NCED6,
CP1,
ABA1,
GAI,
GA3OX1,
GA2OX2,
EXPA1,
GA3OX2
|
17010113 |
Plant J. Mitsunori Seo , Atsushi Hanada , Ayuko Kuwahara , Akira Endo , Masanori Okamoto , Yukika Yamauchi , Helen North , Annie Marion-Poll , Tai-Ping Sun , Tomokazu Koshiba , Yuji Kamiya , Shinjiro Yamaguchi , Eiji Nambara |
2006-11-01 |
PHYB,
CYP707A2,
NCED6,
CYP707A1,
CYP707A3,
GA3OX1,
GA2OX6,
GA2OX2,
ABA2,
GA3OX2
|
16412079 |
Plant J. Valérie Lefebvre , Helen North , Anne Frey , Bruno Sotta , Mitsunori Seo , Masanori Okamoto , Eiji Nambara , Annie Marion-Poll |
2006-02-01 |
NCED6,
NCED9
|
12834401 |
Molecular characterization of the Arabidopsis 9-cis epoxycarotenoid dioxygenase gene family. Plant J Bao-Cai Tan , Leina M Joseph , Wen-Tao Deng , Lijuan Liu , Qin-Bao Li , Kenneth Cline , Donald R McCarty |
2003-07-01 | - |
11532178 |
Plant J S Iuchi , M Kobayashi , T Taji , M Naramoto , M Seki , T Kato , S Tabata , Y Kakubari , K Yamaguchi-Shinozaki , K Shinozaki |
2001-08-01 | - |
11130713 |
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Nature M Salanoubat , K Lemcke , M Rieger , W Ansorge , M Unseld , B Fartmann , G Valle , H Blöcker , M Perez-Alonso , B Obermaier , M Delseny , M Boutry , L A Grivell , R Mache , P Puigdomènech , V De Simone , N Choisne , F Artiguenave , C Robert , P Brottier , P Wincker , L Cattolico , J Weissenbach , W Saurin , F Quétier , M Schäfer , S Müller-Auer , C Gabel , M Fuchs , V Benes , E Wurmbach , H Drzonek , H Erfle , N Jordan , S Bangert , R Wiedelmann , H Kranz , H Voss , R Holland , P Brandt , G Nyakatura , A Vezzi , M D'Angelo , A Pallavicini , S Toppo , B Simionati , A Conrad , K Hornischer , G Kauer , T H Löhnert , G Nordsiek , J Reichelt , M Scharfe , O Schön , M Bargues , J Terol , J Climent , P Navarro , C Collado , A Perez-Perez , B Ottenwälder , D Duchemin , R Cooke , M Laudie , C Berger-Llauro , B Purnelle , D Masuy , M de Haan , A C Maarse , J P Alcaraz , A Cottet , E Casacuberta , A Monfort , A Argiriou , M flores , R Liguori , D Vitale , G Mannhaupt , D Haase , H Schoof , S Rudd , P Zaccaria , H W Mewes , K F Mayer , S Kaul , C D Town , H L Koo , L J Tallon , J Jenkins , T Rooney , M Rizzo , A Walts , T Utterback , C Y Fujii , T P Shea , T H Creasy , B Haas , R Maiti , D Wu , J Peterson , S Van Aken , G Pai , J Militscher , P Sellers , J E Gill , T V Feldblyum , D Preuss , X Lin , W C Nierman , S L Salzberg , O White , J C Venter , C M Fraser , T Kaneko , Y Nakamura , S Sato , T Kato , E Asamizu , S Sasamoto , T Kimura , K Idesawa , K Kawashima , Y Kishida , C Kiyokawa , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Tabata , European Union Chromosome 3 Arabidopsis Sequencing Consortium , Institute for Genomic Research , Kazusa DNA Research Institute |
2000-12-14 |
AT3G49142,
AT3G13898,
AT3G21351,
AT3G41762,
AT3G02645,
AT3G01311,
AT3G01325,
AT3G01345,
AT3G01435,
AT3G05725,
AT3G05937,
AT3G06435,
AT3G07425,
AT3G09032,
AT3G09162,
AT3G10815,
SAG20,
AT3G11385,
PRA1.A3,
AT3G11405,
AT3G13857,
AT3G15358,
AT3G15395,
AT3G16895,
AT3G22415,
AT3G28857,
MIF2,
AT3G43583,
AT3G44785,
AT3G47675,
AT3G47965,
AT3G49307,
AT3G51325,
AT3G52105,
RTFL1,
AT3G54450,
AT3G54826,
AT3G19184,
AT3G20557,
AT3G08943,
AT3G08947,
AT3G04545,
AT3G09190,
AT3G05727,
AT3G07030,
LCR56,
LCR55,
AT3G05327,
GRP5,
AT3G13882,
AT3G01323,
AT3G04903,
AT3G12915,
AT3G12977,
AT3G17155,
LCR41,
AT3G11773,
LCR44,
AT3G10195,
AT3G12345,
AT3G05741,
LCR43,
LCR18,
AT3G13403,
CYP705A28,
AT3G21945,
AT3G22053,
AT3G22057,
AT3G23145,
LCR42,
LCR39,
AT3G23450,
SCRL13,
SCRL12,
AT3G23955,
AT3G24068,
AT3G24093,
AT3G24508,
AT3G24513,
LCR4,
AT3G25597,
SCRL19,
AT3G27831,
AT3G27835,
AT3G27906,
AT3G29255,
AT3G30805,
AT3G32047,
AT3G33187,
AT3G42170,
LCR47,
LCR33,
AT3G43148,
LCR30,
AT3G43833,
AT3G44326,
AT3G45093,
AT3G45577,
LCR48
|
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