TIC - time for coffee-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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821807 TIC

基因描述

Type	Description
Definition	time for coffee

研究结论

Date	Results	Publications
2014-05-03 11:33:00	a loss of TIC function causes a major reprogramming of gene expression that predicts numerous developmental, metabolic, and stress-related phenotypes	23869666
2012-12-08 10:03:00	TIC acts as an output component of the circadian oscillator to influence jasmonic acid signaling directly.	22693280
2010-01-21 00:00:00	the regulation of iron homeostasis in plants is a major output of the TIC- and central oscillator-dependent signaling pathways.	19828447
2007-07-03 21:01:00	TIC encodes a nucleus-acting clock regulator working close to the central oscillator.	17496120

名称对应

Type	IDs
Synonymous	TIME FOR COFFEE
Gene	UniProtKB-ID: TIC_ARATH, B3H7F6_ARATH, A0A1I9LQ49_ARATH UniprotKB: Q94KE2, B3H7F6, A0A1I9LQ49 UniParc: UPI0001739297, UPI00001634D9, UPI000848CFA5 EMBL: AF367257, AY035062, CP002686, AB022215 EnsemblGenome: AT3G22380 KO: ath:AT3G22380
Nucleutide sequences	EMBL-CDS: AEE76628.1, AAK59567.2, AAK56246.1, BAB01776.1, AEE76629.1, ANM64707.1 Gene_ORFName: MCB17.12 EnsemblGenome_TRS: AT3G22380.1
Protein sequencees	EnsemblGenome_PRO: AT3G22380.1 RefSeq: NP_001326717.1, NP_001118676.1, NP_566705.1
Others	UniRef100: UniRef100_B3H7F6, UniRef100_Q94KE2, UniRef100_A0A1I9LQ49 UniRef90: UniRef90_Q94KE2 UniRef50: UniRef50_Q94KE2 UniGene: At.21572, At.67095

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
26545401	Identification of Evening Complex Associated Proteins in Arabidopsis by Affinity Purification and Mass Spectrometry. Mol Cell Proteomics He Huang , Sophie Alvarez , Rebecca Bindbeutel , Zhouxin Shen , Michael J Naldrett , Bradley S Evans , Steven P Briggs , Leslie M Hicks , Steve A Kay , Dmitri A Nusinow	2016-01-01	-
24888433	Post-transcriptional control of GRF transcription factors by microRNA miR396 and GIF co-activator affects leaf size and longevity. Plant J. Juan M Debernardi , Martin A Mecchia , Liesbeth Vercruyssen , Cezary Smaczniak , Kerstin Kaufmann , Dirk Inze , Ramiro E Rodriguez , Javier F Palatnik	2014-08-01	AT2G17930, AT2G18750, SYD, LUH, GRF3, JAL22, JAL23, BRM, ATCHR12, PYK10, GRF5, JR1, BGLU19, TIC, AT3G28500, AT3G58110, ARP7, AT3G63500, G2484-1, AT4G26450, AT4G36080, CHC1, RPL, AL5, AL4, AN3, CHR4, MSI1, SLK2, AT1G09640, SPL8, MBP1, BGLU18, AT1G54020, AT1G57720, BGLU21, BGLU22, LINC1, rpl14
23869666	TIME FOR COFFEE is an essential component in the maintenance of metabolic homeostasis in Arabidopsis thaliana. Plant J. Alfredo Sanchez-Villarreal , Jieun Shin , Nora Bujdoso , Toshihiro Obata , Ulla Neumann , Shen-Xiu Du , Zhaojun Ding , Amanda M Davis , Takayuki Shindo , Elmon Schmelzer , Ronan Sulpice , Adriano Nunes-Nesi , Mark Stitt , Alisdair R Fernie , Seth J Davis	2013-10-01	TIC
22693280	TIME FOR COFFEE represses accumulation of the MYC2 transcription factor to provide time-of-day regulation of jasmonate signaling in Arabidopsis. Plant Cell Jieun Shin , Katharina Heidrich , Alfredo Sanchez-Villarreal , Jane E Parker , Seth J Davis	2012-06-01	TAT3, PR4, TIC, PIL6, VSP2, PDF1.2, PP2AA3, JAZ5, LOX3, MYC2
20813957	Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis. Proc Natl Acad Sci U S A Marcus J Miller , Gregory A Barrett-Wilt , Zhihua Hua , Richard D Vierstra	2010-09-21	-
19828447	Regulation of iron homeostasis in Arabidopsis thaliana by the clock regulator time for coffee. J Biol Chem CÃ©line Duc , FranÃ§oise Cellier , StÃ©phane LobrÃ©aux , Jean-FranÃ§ois Briat , FrÃ©dÃ©ric Gaymard	2009-12-25	-
17496120	TIME FOR COFFEE encodes a nuclear regulator in the Arabidopsis thaliana circadian clock. Plant Cell Zhaojun Ding , Andrew J Millar , Amanda M Davis , Seth J Davis	2007-05-01	ELF3, ELF4, CCA1, TIC, TOC1, GI, LHY
14555691	The TIME FOR COFFEE gene maintains the amplitude and timing of Arabidopsis circadian clocks. Plant Cell Anthony Hall , Ruth M Bastow , Seth J Davis , Shigeru Hanano , Harriet G McWatters , Victoria Hibberd , Mark R Doyle , Sibum Sung , Karen J Halliday , Richard M Amasino , Andrew J Millar	2003-11-01	ELF3, TIC
11130713	Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Nature M Salanoubat , K Lemcke , M Rieger , W Ansorge , M Unseld , B Fartmann , G Valle , H BlÃ¶cker , M Perez-Alonso , B Obermaier , M Delseny , M Boutry , L A Grivell , R Mache , P PuigdomÃ¨nech , V De Simone , N Choisne , F Artiguenave , C Robert , P Brottier , P Wincker , L Cattolico , J Weissenbach , W Saurin , F QuÃ©tier , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , V Benes , E Wurmbach , H Drzonek , H Erfle , N Jordan , S Bangert , R Wiedelmann , H Kranz , H Voss , R Holland , P Brandt , G Nyakatura , A Vezzi , M D'Angelo , A Pallavicini , S Toppo , B Simionati , A Conrad , K Hornischer , G Kauer , T H LÃ¶hnert , G Nordsiek , J Reichelt , M Scharfe , O SchÃ¶n , M Bargues , J Terol , J Climent , P Navarro , C Collado , A Perez-Perez , B OttenwÃ¤lder , D Duchemin , R Cooke , M Laudie , C Berger-Llauro , B Purnelle , D Masuy , M de Haan , A C Maarse , J P Alcaraz , A Cottet , E Casacuberta , A Monfort , A Argiriou , M flores , R Liguori , D Vitale , G Mannhaupt , D Haase , H Schoof , S Rudd , P Zaccaria , H W Mewes , K F Mayer , S Kaul , C D Town , H L Koo , L J Tallon , J Jenkins , T Rooney , M Rizzo , A Walts , T Utterback , C Y Fujii , T P Shea , T H Creasy , B Haas , R Maiti , D Wu , J Peterson , S Van Aken , G Pai , J Militscher , P Sellers , J E Gill , T V Feldblyum , D Preuss , X Lin , W C Nierman , S L Salzberg , O White , J C Venter , C M Fraser , T Kaneko , Y Nakamura , S Sato , T Kato , E Asamizu , S Sasamoto , T Kimura , K Idesawa , K Kawashima , Y Kishida , C Kiyokawa , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Tabata , European Union Chromosome 3 Arabidopsis Sequencing Consortium , Institute for Genomic Research , Kazusa DNA Research Institute	2000-12-14	AT3G49142, AT3G13898, AT3G21351, AT3G41762, AT3G02645, AT3G01311, AT3G01325, AT3G01345, AT3G01435, AT3G05725, AT3G05937, AT3G06435, AT3G07425, AT3G09032, AT3G09162, AT3G10815, SAG20, AT3G11385, PRA1.A3, AT3G11405, AT3G13857, AT3G15358, AT3G15395, AT3G16895, AT3G22415, AT3G28857, MIF2, AT3G43583, AT3G44785, AT3G47675, AT3G47965, AT3G49307, AT3G51325, AT3G52105, RTFL1, AT3G54450, AT3G54826, AT3G19184, AT3G20557, AT3G08943, AT3G08947, AT3G04545, AT3G09190, AT3G05727, AT3G07030, LCR56, LCR55, AT3G05327, GRP5, AT3G13882, AT3G01323, AT3G04903, AT3G12915, AT3G12977, AT3G17155, LCR41, AT3G11773, LCR44, AT3G10195, AT3G12345, AT3G05741, LCR43, LCR18, AT3G13403, CYP705A28, AT3G21945, AT3G22053, AT3G22057, AT3G23145, LCR42, LCR39, AT3G23450, SCRL13, SCRL12, AT3G23955, AT3G24068, AT3G24093, AT3G24508, AT3G24513, LCR4, AT3G25597, SCRL19, AT3G27831, AT3G27835, AT3G27906, AT3G29255, AT3G30805, AT3G32047, AT3G33187, AT3G42170, LCR47, LCR33, AT3G43148, LCR30, AT3G43833, AT3G44326, AT3G45093, AT3G45577, LCR48

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