| Type | Description |
|---|---|
| Definition | pre-mRNA-processing protein 40B |
| Date | Results | Publications |
|---|---|---|
| 2018-07-21 10:53:00 | RNA-seq experiments performed using two independent prp39a alleles revealed hundreds of common genes undergoing changes in alternative splicing, including PRP39a itself, a second putative U1 snRNP component PRP40b, and genes encoding a number of general transcription-related proteins. | 28971960 |
| Type | IDs |
|---|---|
| Synonymous | ATPRP40B, pre-mRNA-processing protein 40B |
| Gene |
UniProtKB-ID:
PR40B_ARATH,
A0A1I9LM87_ARATH
UniprotKB:
F4JCC1,
A0A1I9LM87
UniParc:
UPI000848473F,
UPI0001A7B076
EMBL:
AP000417,
CP002686
EnsemblGenome:
AT3G19670
KO:
ath:AT3G19670
|
| Nucleutide sequences |
EMBL-CDS:
ANM63696.1,
BAB02553.1,
AEE76274.1,
ANM63694.1,
ANM63695.1
Gene_ORFName:
MMB12.15
EnsemblGenome_TRS:
AT3G19670.1,
AT3G19670.2,
AT3G19670.3
|
| Protein sequencees |
EnsemblGenome_PRO:
AT3G19670.3,
AT3G19670.2,
AT3G19670.1
RefSeq:
NP_188601.4,
NP_001325767.1,
NP_001325768.1,
NP_001325769.1
|
| Others |
UniRef100:
UniRef100_A0A1I9LM87,
UniRef100_F4JCC1
UniRef90:
UniRef90_F4JCC1
UniRef50:
UniRef50_F4JCC1
UniGene:
At.27544
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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