PTB1 - polypyrimidine tract-binding protein 1-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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821129 PTB1

基因描述

Type	Description
Definition	polypyrimidine tract-binding protein 1

研究结论

Date	Results	Publications
2015-05-16 10:53:00	PTB1 is a splicing factor that influences alternative splicing and acts at the polypyrimidine tract.	24749484
2013-08-31 11:11:00	Alternative splicing (AS) patterns as well as the expression of key flowering regulators were massively changed in a PTB1/2 level-dependent manner.	23192226
2011-02-23 10:22:00	AtPTB1 and AtPTB2 are widely expressed in almost all tissues, with the highest expression levels in late-maturing and mature pollen grains, and are crucial for pollen germination. [AtPTB1]	19122186

名称对应

Type	IDs
Synonymous	ATPTB1, POLYPYRIMIDINE TRACT-BINDING, POLYPYRIMIDINE TRACT-BINDING PROTEIN 1, PTB, T4P13.16, T4P13_16, polypyrimidine tract-binding protein 1
Gene	UniProtKB-ID: PTBP1_ARATH, Q8RWB0_ARATH, A0A384LJ51_ARATH, B9DFT7_ARATH, A0A1I9LSX9_ARATH, B3H7H5_ARATH UniprotKB: Q9MAC5, Q8RWB0, A0A384LJ51, B9DFT7, A0A1I9LSX9, B3H7H5 UniParc: UPI0008488D47, UPI00000A981D, UPI00084863E5, UPI00000ABF58 EMBL: CACSHJ010000089, AK316897, AC008261, AY093218, BT001239, CP002686, LUHQ01000003, CACRSJ010000106, AF076924 EnsemblGenome: AT3G01150 KO: ath:AT3G01150
Nucleutide sequences	EMBL-CDS: AEE73616.1, AAC62015.1, AAF26159.1, AAN65126.1, AAM13217.1, ANM65686.1, VYS55910.1, OAP06773.1, CAA0380943.1, BAH19604.1, ANM65687.1, AEE73617.2 Gene_ORFName: T4P13.16, T4P13_16, T4P13.16, C24_LOCUS11201, AN1_LOCUS11364, T4P13.16, T4P13_16, T4P13.16, T4P13_16 EnsemblGenome_TRS: AT3G01150.1
Protein sequencees	EnsemblGenome_PRO: AT3G01150.1 RefSeq: NP_186764.1, NP_001327637.1, NP_001319439.1, NP_001327636.1
Others	UniRef100: UniRef100_Q8RWB0, UniRef100_Q9MAC5, UniRef100_B3H7H5, UniRef100_A0A1I9LSX9 UniRef90: UniRef90_Q8RWB0, UniRef90_Q9MAC5, UniRef90_A0A1I9LSX9, UniRef90_B3H7H5 UniRef50: UniRef50_B3H7H5, UniRef50_Q9MAC5, UniRef50_Q8RWB0 UniGene: At.18320

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
32344669	Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Biomolecules Marcel Bach-Pages , Felix Homma , Jiorgos Kourelis , Farnusch Kaschani , Shabaz Mohammed , Markus Kaiser , Renier A L van der Hoorn , Alfredo Castello , Gail M Preston	2020-04-24	-
24749484	Arabidopsis PTB1 and PTB2 proteins negatively regulate splicing of a mini-exon splicing reporter and affect alternative splicing of endogenous genes differentially. New Phytol Craig G Simpson , Dominika Lewandowska , Michele Liney , Diane Davidson , Sean Chapman , John Fuller , Jim McNicol , Paul Shaw , John W S Brown	2014-07-01	-
23192226	Polypyrimidine tract binding protein homologs from Arabidopsis are key regulators of alternative splicing with implications in fundamental developmental processes. Plant Cell Christina RÃ¼hl , Eva Stauffer , AndrÃ© Kahles , Gabriele Wagner , Gabriele Drechsel , Gunnar RÃ¤tsch , Andreas Wachter	2012-11-01	PTB1, PIL2, PTB2
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
20735772	Polypyrimidine tract-binding protein homologues from Arabidopsis underlie regulatory circuits based on alternative splicing and downstream control. Plant J. Eva Stauffer , Alexander Westermann , Gabriele Wagner , Andreas Wachter	2010-10-01	PTB1, PTB2, PTB3
19122186	Involvement of polypyrimidine tract-binding protein (PTB)-related proteins in pollen germination in Arabidopsis. Plant Cell Physiol. Shuyi Wang , Takashi Okamoto	2009-02-01	PTB1, PTB2
15610358	High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. Plant J. Olga A Koroleva , Matthew L Tomlinson , David Leader , Peter Shaw , John H Doonan	2005-01-01	APK2B, XTH4, NRPB3, FVE, AT2G20880, XK-1, AGP2, IAA8, CIPK3, AT2G27500, WRKY25, PUR ALPHA-1, ATP3, AT2G33710, AT2G33730, NF-YA4, AT2G35840, ADK, SNZ, BIK1, EIF2, GRF9, AT2G42910, AT2G43370, CKB4, ERF13, AT2G45680, AT2G45850, WRKY46, U1A, DRT102, RBK2, RPT5A, AT3G07720, AT3G10030, AT3G10330, AT3G10572, PGK1, ECT2, RHD3, AT3G14060, AT3G16800, PTB1, AT3G02530, FYPP3, AT3G20510, AT3G21770, AT3G23600, ATB' DELTA, ADF2, ARLA1C, FLN1, MYB109, PP2A-4, MBF1B, AT3G60180, AT4G07950, AT4G08170, CRY1, APX4, AHL1, HB-2, AT4G16830, EIF4E, AT4G18950, MPK4, AT4G23860, AT4G24690, PPX1, TAP38, CAK1AT, MKK2, XTH24, CYCD3;1, GATA3, bHLH11, AT4G37520, YLS8, AT5G12850, KIN2, AT5G18900, AT5G19730, AT5G19890, RAN2, TSL, AT5G23520, AT5G25440, AT5G28900, LSP1, AT5G36250, AT5G36790, AHP3, XPB1, BI1, D6PKL2, SCL8, OMT1, XTH12, eIFiso4G1
11130713	Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Nature M Salanoubat , K Lemcke , M Rieger , W Ansorge , M Unseld , B Fartmann , G Valle , H BlÃ¶cker , M Perez-Alonso , B Obermaier , M Delseny , M Boutry , L A Grivell , R Mache , P PuigdomÃ¨nech , V De Simone , N Choisne , F Artiguenave , C Robert , P Brottier , P Wincker , L Cattolico , J Weissenbach , W Saurin , F QuÃ©tier , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , V Benes , E Wurmbach , H Drzonek , H Erfle , N Jordan , S Bangert , R Wiedelmann , H Kranz , H Voss , R Holland , P Brandt , G Nyakatura , A Vezzi , M D'Angelo , A Pallavicini , S Toppo , B Simionati , A Conrad , K Hornischer , G Kauer , T H LÃ¶hnert , G Nordsiek , J Reichelt , M Scharfe , O SchÃ¶n , M Bargues , J Terol , J Climent , P Navarro , C Collado , A Perez-Perez , B OttenwÃ¤lder , D Duchemin , R Cooke , M Laudie , C Berger-Llauro , B Purnelle , D Masuy , M de Haan , A C Maarse , J P Alcaraz , A Cottet , E Casacuberta , A Monfort , A Argiriou , M flores , R Liguori , D Vitale , G Mannhaupt , D Haase , H Schoof , S Rudd , P Zaccaria , H W Mewes , K F Mayer , S Kaul , C D Town , H L Koo , L J Tallon , J Jenkins , T Rooney , M Rizzo , A Walts , T Utterback , C Y Fujii , T P Shea , T H Creasy , B Haas , R Maiti , D Wu , J Peterson , S Van Aken , G Pai , J Militscher , P Sellers , J E Gill , T V Feldblyum , D Preuss , X Lin , W C Nierman , S L Salzberg , O White , J C Venter , C M Fraser , T Kaneko , Y Nakamura , S Sato , T Kato , E Asamizu , S Sasamoto , T Kimura , K Idesawa , K Kawashima , Y Kishida , C Kiyokawa , M Kohara , M Matsumoto , A Matsuno , A Muraki , S Nakayama , N Nakazaki , S Shinpo , C Takeuchi , T Wada , A Watanabe , M Yamada , M Yasuda , S Tabata , European Union Chromosome 3 Arabidopsis Sequencing Consortium , Institute for Genomic Research , Kazusa DNA Research Institute	2000-12-14	AT3G49142, AT3G13898, AT3G21351, AT3G41762, AT3G02645, AT3G01311, AT3G01325, AT3G01345, AT3G01435, AT3G05725, AT3G05937, AT3G06435, AT3G07425, AT3G09032, AT3G09162, AT3G10815, SAG20, AT3G11385, PRA1.A3, AT3G11405, AT3G13857, AT3G15358, AT3G15395, AT3G16895, AT3G22415, AT3G28857, MIF2, AT3G43583, AT3G44785, AT3G47675, AT3G47965, AT3G49307, AT3G51325, AT3G52105, RTFL1, AT3G54450, AT3G54826, AT3G19184, AT3G20557, AT3G08943, AT3G08947, AT3G04545, AT3G09190, AT3G05727, AT3G07030, LCR56, LCR55, AT3G05327, GRP5, AT3G13882, AT3G01323, AT3G04903, AT3G12915, AT3G12977, AT3G17155, LCR41, AT3G11773, LCR44, AT3G10195, AT3G12345, AT3G05741, LCR43, LCR18, AT3G13403, CYP705A28, AT3G21945, AT3G22053, AT3G22057, AT3G23145, LCR42, LCR39, AT3G23450, SCRL13, SCRL12, AT3G23955, AT3G24068, AT3G24093, AT3G24508, AT3G24513, LCR4, AT3G25597, SCRL19, AT3G27831, AT3G27835, AT3G27906, AT3G29255, AT3G30805, AT3G32047, AT3G33187, AT3G42170, LCR47, LCR33, AT3G43148, LCR30, AT3G43833, AT3G44326, AT3G45093, AT3G45577, LCR48

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