| Type | Description |
|---|---|
| Definition | regulator of nonsense transcripts UPF2 |
| Date | Results | Publications |
|---|---|---|
| 2014-07-11 11:40:00 | Data suggests a complex regulatory network, likely composed of light signaling and NMD factor-mediated pathways involving NMD factor proteins, UPF1, UPF2, and UPF3, in influencing plant development and adaption to environmental stresses. [UPF2] | 22353561 |
| 2010-01-21 00:00:00 | The nonsense-mediated decay factor UPF2 localize to the nucleolus, suggesting that the Arabidopsis nucleolus is therefore involved in identifying aberrant mRNAs and NMD. | 19602621 |
| Type | IDs |
|---|---|
| Synonymous | T16B24.10, T16B24_10 |
| Gene |
UniProtKB-ID:
RENT2_ARATH,
A0A178W2N7_ARATH
UniprotKB:
F4IUX6,
A0A178W2N7
UniParc:
UPI00005DC2D7
EMBL:
CP002685,
CACSHJ010000088,
CACRSJ010000105,
AK227294,
LUHQ01000002,
AC004697
EnsemblGenome:
AT2G39260
KO:
ath:AT2G39260
|
| Nucleutide sequences |
EMBL-CDS:
AAC28982.1,
AEC09651.1,
CAA0375636.1,
VYS54933.1,
OAP11603.1
Gene_ORFName:
T16B24.10,
AN1_LOCUS10388,
C24_LOCUS10232
EnsemblGenome_TRS:
AT2G39260.1
|
| Protein sequencees |
EnsemblGenome_PRO:
AT2G39260.1
RefSeq:
NP_181459.4
|
| Others |
UniRef100:
UniRef100_F4IUX6
UniRef90:
UniRef90_F4IUX6
UniRef50:
UniRef50_F4IUX6
UniGene:
At.12815
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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