SUVH5 - SU(VAR)3-9 homolog 5-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

收藏

818083 SUVH5

基因描述

Type	Description
Definition	SU(VAR)3-9 homolog 5

研究结论

Date	Results	Publications
2018-05-19 10:39:00	the histone deacetylase HDA6 can interact with the histone methyltransferases SUVH4, SUVH5, and SUVH6 (SUVH4/5/6).	28778955
2011-02-26 10:31:00	a functional SUVH5 SRA domain is required for both DNA methylation and accumulation of the H3K9 dimethyl modification in vivo, suggesting a role for the SRA domain in recruitment of SUVH5 to genomic loci.	21245167
2010-01-21 00:00:00	SUVH5 protein has histone methyltransferase activity in vitro and contributes to the maintenance of methylation of histone H3 at Lysine-9 and CMT3-mediated non-CG methylation in vivo.	16582009

名称对应

Type	IDs
Synonymous	SET DOMAIN-CONTAINING PROTEIN 9, SGD9, SU(VAR)3-9 homolog 5, T4C15.17, T4C15_17
Gene	UniProtKB-ID: SUVH5_ARATH, A0A1P8AZY9_ARATH, A0A178VMZ6_ARATH UniprotKB: O82175, A0A1P8AZY9, A0A178VMZ6 UniParc: UPI000848483D, UPI000000BFDF EMBL: CP002685, AC004667, AY062735, BT003374, LUHQ01000002, AF344448 EnsemblGenome: AT2G35160 KO: ath:AT2G35160
Nucleutide sequences	EMBL-CDS: AAC61820.1, ANM62211.1, AEC09075.1, AAO30037.1, AAL32813.1, ANM62213.1, AAK28970.1, ANM62214.1, ANM62212.1, OAP07689.1 Gene_ORFName: T4C15.17, T4C15_17, T4C15.17 EnsemblGenome_TRS: AT2G35160.3, AT2G35160.4, AT2G35160.1, AT2G35160.2
Protein sequencees	EnsemblGenome_PRO: AT2G35160.3, AT2G35160.1, AT2G35160.2, AT2G35160.4 RefSeq: NP_181061.1, NP_001324389.1, NP_001324388.1, NP_001324386.1, NP_001324387.1
Others	UniRef100: UniRef100_O82175 UniRef90: UniRef90_O82175 UniRef50: UniRef50_Q8VZ17 UniGene: At.12724

全选

{{proteinIndex+1}}

mRNA

Protein

UniprotKB

Description

Refseq

{{protein.nucleotideVersion}}

Ensembl: {{protein.nucleotideEnsembl}}

{{protein.proteinVersion}}

Ensembl: {{protein.proteinEnsembl}}

{{uniprot}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

暂无数据

收藏到我的文献

全选

Pubmed编号	文献信息	发表日期	相关基因
28650476	CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Nat. Methods Shelly A Trigg , Renee M Garza , Andrew MacWilliams , Joseph R Nery , Anna Bartlett , Rosa Castanon , Adeline Goubil , Joseph Feeney , Ronan O'Malley , Shao-Shan C Huang , Zhuzhu Z Zhang , Mary Galli , Joseph R Ecker	2017-08-01	-
28778955	HISTONE DEACETYLASE6 Acts in Concert with Histone Methyltransferases SUVH4, SUVH5, and SUVH6 to Regulate Transposon Silencing. Plant Cell Chun-Wei Yu , Ready Tai , Shen-Chi Wang , Ping Yang , Ming Luo , Songguang Yang , Kai Cheng , Wen-Chun Wang , Yi-Sheng Cheng , Keqiang Wu	2017-08-01	-
21798944	Evidence for network evolution in an Arabidopsis interactome map. Science Arabidopsis Interactome Mapping Consortium	2011-07-29	AT2G01175, AT2G24693, AT2G42395, AT4G02725, SCRL10, AT4G23895, AT4G25315, AT4G36515, AT1G17285, AT1G30475, AT3G01435, AT3G15395, AT3G47675, AT3G54826, AT5G44565, AT5G52547, AT4G18205, ENA, ORC4, AT2G01190, AT2G01250, RPI2, MLP329, RGA1, AT2G01580, MEE11, AT2G01710, RR14, VIT1, PTR2, AT2G02050, ETL1, PP2-B5, PP2-B10, AT2G02410, AL6, CAND1, AT2G02570, PLPB, UTR1, AT2G02870, PKS1, RNS1, SPP, SK16, FT1, AT2G03430, AT2G03500, AT2G03505, AT2G03640, SPR1, AT2G03870, CR88, AT2G04100, AT2G04230, AT2G04390, IBR5, NRPB6B, AT2G04650, AT2G04690, AT2G04800, AT2G04900, AT2G05230, GRP-3, ATG8D, PAA2, OPR3, AT2G07738, MGDC, AT2G12290, AGT, NF-YB7, AT2G14835, AT2G14860, AT2G15270, ARFB1A, NRPB3, NIR1, PDV2, THY-1, BLH7, AT2G16710, UBC29, AT2G16800, PIP2;8, AT2G16880, AT2G16890, AT2G16900, AT2G16930, AT2G17150, DSK2, AT2G17350, AT2G17540, AT2G17670, AT2G17760, BZIP27, AT2G17880, AT2G17972, AT2G18110
21245167	A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo. Genes Dev. Eerappa Rajakumara , Julie A Law , Dhirendra K Simanshu , Philipp Voigt , Lianna M Johnson , Danny Reinberg , Dinshaw J Patel , Steven E Jacobsen	2011-01-15	SUVH5
17722694	Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. Mol. Plant Microbe Interact. Marc Libault , Jinrong Wan , Tomasz Czechowski , Michael Udvardi , Gary Stacey	2007-08-01	XERICO, SERK4, NAC036, BZIP27, VND1, WRKY15, WRKY17, HSFA2, PUB12, ERF15, AT2G33710, JAZ7, SUVH5, PUB23, ABI5, AT2G37430, WRKY33, CZF1, ERF13, WRKY46, ATL6, PUB24, ERF4, ATL2, PUB29, PUB25, ZF2, BBX32, AT3G23230, MYB15, PMZ, NAC061, AT3G46080, ZAT7, AT3G46600, AT3G46620, NAC062, MYB77, CEJ1, PUB22, AT3G52800, MYB27, AT3G53600, SZF1, WRKY70, AT3G56770, RHA1B, AT-HSFB2B, AT4G15975, SCL13, ERF6, ERF-1, AT4G18450, HSF A4A, WRKY22, AT4G01350, WRKY29, WRKY53, AT4G26120, AT4G26400, MYB41, AT4G28140, AT4G29110, AT4G30370, WRKY11, WRKY18, EDA39, AT4G33940, RRTF1, RHA3B, MYB73, BT5, AT4G39070, AT5G09800, RING1, HSFA3, PTL, AT5G01830, AT5G22890, CNI1, AT5G37490, AT5G38895, ZF3, AT5G46910, ERF2, ERF5, AT5G48655, WRKY48, AT5G51190, AT5G56960, AT5G58610, AT5G59450, AT5G59550, MYB59, RHL41, HSFB2A, CMPG2, AT5G66070, MYBR1
16582009	Locus-specific control of DNA methylation by the Arabidopsis SUVH5 histone methyltransferase. Plant Cell Michelle L Ebbs , Judith Bender	2006-05-01	SUVH5
11691919	The Arabidopsis thaliana genome contains at least 29 active genes encoding SET domain proteins that can be assigned to four evolutionarily conserved classes. Nucleic Acids Res. L O Baumbusch , T Thorstensen , V Krauss , A Fischer , K Naumann , R Assalkhou , I Schulz , G Reuter , R B Aalen	2001-11-01	-
10617197	Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Nature X Lin , S Kaul , S Rounsley , T P Shea , M I Benito , C D Town , C Y Fujii , T Mason , C L Bowman , M Barnstead , T V Feldblyum , C R Buell , K A Ketchum , J Lee , C M Ronning , H L Koo , K S Moffat , L A Cronin , M Shen , G Pai , S Van Aken , L Umayam , L J Tallon , J E Gill , M D Adams , A J Carrera , T H Creasy , H M Goodman , C R Somerville , G P Copenhaver , D Preuss , W C Nierman , O White , J A Eisen , S L Salzberg , C M Fraser , J C Venter	1999-12-16	AT2G41231, AT2G24681, AT2G04115, AT2G24645, AT2G48121, AT2G02148, AT2G46493, AT2G27389, AT2G07599, AT2G30105, AT2G29065, AT2G46494, AT2G01175, AT2G05185, AT2G05635, AT2G07777, AT2G07779, AT2G07785, AT2G07787, AT2G10608, AT2G13126, AT2G14247, AT2G14255, AT2G14635, AT2G14846, AT2G16385, AT2G17055, AT2G17787, AT2G20142, AT2G22122, AT2G22905, AT2G24693, AT2G25305, AT2G26135, AT2G26695, ENODL20, AT2G27315, AT2G27402, AT2G28625, AT2G30505, AT2G30942, AT2G30985, AT2G31345, AT2G31862, AT2G32275, AT2G33705, AT2G33793, AT2G33796, AT2G34357, AT2G34655, AT2G35612, AT2G36695, ROT4, AT2G38695, AT2G39415, AT2G40085, AT2G41905, AT2G41945, AT2G42395, AT2G47485, AT2G34185, AT2G05050, SCRL16, LCR14, AT2G07768, LCR62, LCR81, AT2G20463, AT2G22807, AT2G06166, LCR60, LCR76, AT2G30933, AT2G16586, LCR75, AT2G36724, AT2G15110, AT2G22345, LCR73, AT2G04034, SCRL15, AT2G03955, AT2G13542, LCR40, AT2G12475, LCR9, AT2G03932, AT2G03931, AT2G03933, SCRL17, AT2G10260, AT2G19802, AT2G14270, SCRL18, LCR32, LCR82, AT2G07669, AT2G29430, AT2G07795

研究热度

热点单位

排名	科研单位	文献
{{affIndex+1}}	{{aff.value}}	{{aff.size}}

目前还没有研究热点单位

热点人员

排名	研究人员	文献
{{authorIndex+1}}	{{author.value}}	{{author.size}}

目前还没有研究热点人员

© 2017 biocloud.net版权所有 ICP证：京10042835号