AtIPCS3 - Inositol phosphorylceramide synthase 3-BMKCloudï½ç¾è¿å®¢äº

817501 AtIPCS3

基因描述

Type	Description
Definition	Inositol phosphorylceramide synthase 3

研究结论

Date	Results	Publications
2011-03-14 12:17:00	Three Arabidopsis inositol phosphorylceramid (IPC) synthases were functionally analysed, to confirm them as aureobasidin A resistant AUR1p orthologues. Genes encoding these orthologues are differentially expressed in various tissue. [IPCS3]	20309609

名称对应

Type	IDs
Synonymous	Arabidopsis Inositol phosphorylceramide synthase 3
Gene	UniProtKB-ID: IPCS3_ARATH, A0A1P8B0S8_ARATH UniprotKB: Q56Y01, A0A1P8B0S8 UniParc: UPI000034EDC5, UPI000034EDC6, UPI000848D7F2, UPI000287A2E4 EMBL: CP002685, AK221522, AC004561, AY231431, BX820662 EnsemblGenome: AT2G29525 KO: ath:AT2G29525
Nucleutide sequences	EMBL-CDS: AEC08265.1, AEC08264.1, AAO86859.1, AEC08263.1, BAD94812.1, ANM62493.1, ANM62494.1 Gene_ORFName: F16P2.49 EnsemblGenome_TRS: AT2G29525.2, AT2G29525.3, AT2G29525.1, AT2G29525.4
Protein sequencees	EnsemblGenome_PRO: AT2G29525.3, AT2G29525.2, AT2G29525.1, AT2G29525.4 RefSeq: NP_001324648.1, NP_850134.2, NP_001318312.1, NP_001189633.1, NP_973560.1
Others	UniRef100: UniRef100_A0A1P8B0S8, UniRef100_Q56Y01 UniRef90: UniRef90_A0A1P8B0S8, UniRef90_Q56Y01 UniRef50: UniRef50_Q56Y01-3, UniRef50_Q56Y01 UniGene: At.11436, At.66368

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

暂无数据

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全选

Pubmed编号	文献信息	发表日期	相关基因
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
20309609	Functional analyses of differentially expressed isoforms of the Arabidopsis inositol phosphorylceramide synthase. Plant Mol Biol J G Mina , Y Okada , N K Wansadhipathi-Kannangara , S Pratt , H Shams-Eldin , R T Schwarz , P G Steel , T Fawcett , P W Denny	2010-07-01	-
10617197	Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Nature X Lin , S Kaul , S Rounsley , T P Shea , M I Benito , C D Town , C Y Fujii , T Mason , C L Bowman , M Barnstead , T V Feldblyum , C R Buell , K A Ketchum , J Lee , C M Ronning , H L Koo , K S Moffat , L A Cronin , M Shen , G Pai , S Van Aken , L Umayam , L J Tallon , J E Gill , M D Adams , A J Carrera , T H Creasy , H M Goodman , C R Somerville , G P Copenhaver , D Preuss , W C Nierman , O White , J A Eisen , S L Salzberg , C M Fraser , J C Venter	1999-12-16	AT2G41231, AT2G24681, AT2G04115, AT2G24645, AT2G48121, AT2G02148, AT2G46493, AT2G27389, AT2G07599, AT2G30105, AT2G29065, AT2G46494, AT2G01175, AT2G05185, AT2G05635, AT2G07777, AT2G07779, AT2G07785, AT2G07787, AT2G10608, AT2G13126, AT2G14247, AT2G14255, AT2G14635, AT2G14846, AT2G16385, AT2G17055, AT2G17787, AT2G20142, AT2G22122, AT2G22905, AT2G24693, AT2G25305, AT2G26135, AT2G26695, ENODL20, AT2G27315, AT2G27402, AT2G28625, AT2G30505, AT2G30942, AT2G30985, AT2G31345, AT2G31862, AT2G32275, AT2G33705, AT2G33793, AT2G33796, AT2G34357, AT2G34655, AT2G35612, AT2G36695, ROT4, AT2G38695, AT2G39415, AT2G40085, AT2G41905, AT2G41945, AT2G42395, AT2G47485, AT2G34185, AT2G05050, SCRL16, LCR14, AT2G07768, LCR62, LCR81, AT2G20463, AT2G22807, AT2G06166, LCR60, LCR76, AT2G30933, AT2G16586, LCR75, AT2G36724, AT2G15110, AT2G22345, LCR73, AT2G04034, SCRL15, AT2G03955, AT2G13542, LCR40, AT2G12475, LCR9, AT2G03932, AT2G03931, AT2G03933, SCRL17, AT2G10260, AT2G19802, AT2G14270, SCRL18, LCR32, LCR82, AT2G07669, AT2G29430, AT2G07795

Pubmed编号

文献信息

发表日期

相关基因

21873635

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.

Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas

2011-09-01

20309609

Functional analyses of differentially expressed isoforms of the Arabidopsis inositol phosphorylceramide synthase.

Plant Mol Biol J G Mina , Y Okada , N K Wansadhipathi-Kannangara , S Pratt , H Shams-Eldin , R T Schwarz , P G Steel , T Fawcett , P W Denny

2010-07-01

10617197

Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.

Nature X Lin , S Kaul , S Rounsley , T P Shea , M I Benito , C D Town , C Y Fujii , T Mason , C L Bowman , M Barnstead , T V Feldblyum , C R Buell , K A Ketchum , J Lee , C M Ronning , H L Koo , K S Moffat , L A Cronin , M Shen , G Pai , S Van Aken , L Umayam , L J Tallon , J E Gill , M D Adams , A J Carrera , T H Creasy , H M Goodman , C R Somerville , G P Copenhaver , D Preuss , W C Nierman , O White , J A Eisen , S L Salzberg , C M Fraser , J C Venter

1999-12-16

AT2G41231, AT2G24681, AT2G04115, AT2G24645, AT2G48121, AT2G02148, AT2G46493, AT2G27389, AT2G07599, AT2G30105, AT2G29065, AT2G46494, AT2G01175, AT2G05185, AT2G05635, AT2G07777, AT2G07779, AT2G07785, AT2G07787, AT2G10608, AT2G13126, AT2G14247, AT2G14255, AT2G14635, AT2G14846, AT2G16385, AT2G17055, AT2G17787, AT2G20142, AT2G22122, AT2G22905, AT2G24693, AT2G25305, AT2G26135, AT2G26695, ENODL20, AT2G27315, AT2G27402, AT2G28625, AT2G30505, AT2G30942, AT2G30985, AT2G31345, AT2G31862, AT2G32275, AT2G33705, AT2G33793, AT2G33796, AT2G34357, AT2G34655, AT2G35612, AT2G36695, ROT4, AT2G38695, AT2G39415, AT2G40085, AT2G41905, AT2G41945, AT2G42395, AT2G47485, AT2G34185, AT2G05050, SCRL16, LCR14, AT2G07768, LCR62, LCR81, AT2G20463, AT2G22807, AT2G06166, LCR60, LCR76, AT2G30933, AT2G16586, LCR75, AT2G36724, AT2G15110, AT2G22345, LCR73, AT2G04034, SCRL15, AT2G03955, AT2G13542, LCR40, AT2G12475, LCR9, AT2G03932, AT2G03931, AT2G03933, SCRL17, AT2G10260, AT2G19802, AT2G14270, SCRL18, LCR32, LCR82, AT2G07669, AT2G29430, AT2G07795

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