NERD - GW repeat- and PHD finger-containing protein NERD-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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816147 NERD

基因描述

Type	Description
Definition	GW repeat- and PHD finger-containing protein NERD

研究结论

Date	Results	Publications
2014-06-19 10:58:00	A central role for NERD in integrating RNA silencing and chromatin signals in transcriptional silencing is supported by data showing that it binds both to histone H3 and AGO2 proteins and contributes to siRNA accumulation at a NERD-targeted locus. [NERD]	22940247

名称对应

Type	IDs
Synonymous	F16F14.1, F16F14_1, Needed for RDR2-independent DNA methylation
Gene	UniProtKB-ID: C3H19_ARATH, A0A1P8B1D0_ARATH UniprotKB: Q9SIV5, A0A1P8B1D0 UniParc: UPI0001A7AECE, UPI000848B4F5 EMBL: CP002685, AC007047, DQ446507 EnsemblGenome: AT2G16485 KO: ath:AT2G16485
Nucleutide sequences	EMBL-CDS: AEC06501.1, ABE65448.1, AAM15362.1, AAD22293.1, AAD22314.1, ANM62715.1 Gene_ORFName: F16F14, F16F14.1, F16F14_1 EnsemblGenome_TRS: AT2G16485.1
Protein sequencees	EnsemblGenome_PRO: AT2G16485.1 RefSeq: NP_001324854.1, NP_179241.4
Others	UniRef100: UniRef100_Q9SIV5, UniRef100_A0A1P8B1D0 UniRef90: UniRef90_Q9SIV5 UniRef50: UniRef50_Q9SIV5 UniGene: At.40269

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
22940247	NERD, a plant-specific GW protein, defines an additional RNAi-dependent chromatin-based pathway in Arabidopsis. Mol. Cell Dominique Pontier , Claire Picart , FranÃ§ois Roudier , Damien Garcia , Sylvie Lahmy , Jacinthe Azevedo , Emilie Alart , MichÃ¨le LaudiÃ© , Wojciech M Karlowski , Richard Cooke , Vincent Colot , Olivier Voinnet , Thierry Lagrange	2012-10-12	AT2G16485, AGO2
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
21166475	Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J. Proteome Res. Jun Ito , Tanveer S Batth , Christopher J Petzold , Alyssa M Redding-Johanson , Aindrila Mukhopadhyay , Robert Verboom , Etienne H Meyer , A Harvey Millar , Joshua L Heazlewood	2011-04-01	AT3G08943, AT3G08947, AT3G07030, AT3G42170, AT4G22285, AT1G24800, AT1G25055, AT1G24881, AT1G25211, AT2G01250, AT2G01690, GSTZ1, AT2G02400, AL6, CAND1, UBC2, GEK1, AT2G03820, CR88, AT2G04390, AT2G04400, AT2G04520, AT2G05220, ACO3, AT2G05920, HEN2, PFD1, AT2G07360, AT2G09990, ABH1, DRP3B, PIP, UGT73B4, NIR1, SQN, AT2G15860, HB1, THY-1, PAP10, MCM4, AT2G16485, ASE1, ROC3, MSI2, UBC23, AT2G16940, TRN1, DSK2, AT2G17280, CPK6, AT2G17360, NTRA, AT2G17930, ATSLY1, EMB2296, PIN1AT, AT2G18110, AT2G18220, COAD, TPS11, AT2G18740, NAP1;2, FVE, CDA1, PRMT1A, PRF1, AT2G20140, CLASP, RPN1A, AT2G20760, AT2G21130, TIM, AT2G21250, UFD1, AT2G21390, CCR2, AT2G22125, AAT, AT2G22420, GEM, SNRK2.9, AT2G23070, PAB4, AT2G23820, SNRNP-G, eIFiso4G2, AT2G24190, AT2G24200, AT2G24590, MAPR2, AT2G25670, AT2G25970, SEH, FUS12, PAG1, CAM5, AGO4, SE, AAO3
10617197	Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Nature X Lin , S Kaul , S Rounsley , T P Shea , M I Benito , C D Town , C Y Fujii , T Mason , C L Bowman , M Barnstead , T V Feldblyum , C R Buell , K A Ketchum , J Lee , C M Ronning , H L Koo , K S Moffat , L A Cronin , M Shen , G Pai , S Van Aken , L Umayam , L J Tallon , J E Gill , M D Adams , A J Carrera , T H Creasy , H M Goodman , C R Somerville , G P Copenhaver , D Preuss , W C Nierman , O White , J A Eisen , S L Salzberg , C M Fraser , J C Venter	1999-12-16	AT2G41231, AT2G24681, AT2G04115, AT2G24645, AT2G48121, AT2G02148, AT2G46493, AT2G27389, AT2G07599, AT2G30105, AT2G29065, AT2G46494, AT2G01175, AT2G05185, AT2G05635, AT2G07777, AT2G07779, AT2G07785, AT2G07787, AT2G10608, AT2G13126, AT2G14247, AT2G14255, AT2G14635, AT2G14846, AT2G16385, AT2G17055, AT2G17787, AT2G20142, AT2G22122, AT2G22905, AT2G24693, AT2G25305, AT2G26135, AT2G26695, ENODL20, AT2G27315, AT2G27402, AT2G28625, AT2G30505, AT2G30942, AT2G30985, AT2G31345, AT2G31862, AT2G32275, AT2G33705, AT2G33793, AT2G33796, AT2G34357, AT2G34655, AT2G35612, AT2G36695, ROT4, AT2G38695, AT2G39415, AT2G40085, AT2G41905, AT2G41945, AT2G42395, AT2G47485, AT2G34185, AT2G05050, SCRL16, LCR14, AT2G07768, LCR62, LCR81, AT2G20463, AT2G22807, AT2G06166, LCR60, LCR76, AT2G30933, AT2G16586, LCR75, AT2G36724, AT2G15110, AT2G22345, LCR73, AT2G04034, SCRL15, AT2G03955, AT2G13542, LCR40, AT2G12475, LCR9, AT2G03932, AT2G03931, AT2G03933, SCRL17, AT2G10260, AT2G19802, AT2G14270, SCRL18, LCR32, LCR82, AT2G07669, AT2G29430, AT2G07795

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