| Type | Description |
|---|---|
| Definition | collagen, type VI, alpha 5 |
| Date | Results | Publications |
|---|---|---|
| 2011-11-26 10:37:00 | The collagen VI alpha 5 chain is present in perimysium and at the neuromuscular junctions in skeletal muscle, skin, kidney glomerulus, interfollicular stroma in ovary and in the tunica albuginea of testis | 21477648 |
| 2010-01-21 00:00:00 | analysis of collagen VI chains alpha4, alpha5, and alpha6with high homology to the alpha3 chain | 18276594 |
| 2010-01-21 00:00:00 | discovery of three additional collagen VI chains doubles the collagen VI family and adds a layer of complexity to collagen VI assembly and function in the extracellular matrix | 18400749 |
| Type | IDs |
|---|---|
| Synonymous | Col29a1, EG665033, Gm7455 |
| Gene |
UniProtKB-ID:
CO6A5_MOUSE,
A0A140T8W1_MOUSE
UniprotKB:
A6H584,
A0A140T8W1
UniParc:
UPI0004620E99,
UPI0001BE80A9
EMBL:
AC120386,
AM748257,
AM748258,
AC119951,
AM748256
Ensembl:
ENSMUSG00000091345
KO:
mmu:665033
|
| Nucleutide sequences |
EMBL-CDS:
CAO01891.1,
CAO01892.1,
CAO01893.1
Ensembl_TRS:
ENSMUST00000190193
|
| Protein sequencees |
Ensembl_PRO:
ENSMUSP00000139398
RefSeq:
NP_001161395.1,
XP_030100352.2,
XP_036011070.1
|
| Others |
UniRef100:
UniRef100_A0A140T8W1,
UniRef100_A6H584
UniRef90:
UniRef90_A6H584
UniRef50:
UniRef50_A8TX70
UniGene:
Mm.39826
CCDS:
CCDS85720.1
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 28071719 |
Sci Rep Alexandra Naba , Karl R Clauser , D R Mani , Steven A Carr , Richard O Hynes |
2017-01-10 | - |
| 25572963 |
Matrix Biol. Tatiana Y Besschetnova , Takaharu Ichimura , Negin Katebi , Brad St Croix , Joseph V Bonventre , Bjorn R Olsen |
2015-03-01 |
Acta2,
Adam17,
Angpt1,
Angpt2,
Cxcr4,
Cnn1,
Col18a1,
Col2a1,
Col3a1,
Col4a1,
Col6a1,
Col6a2,
Col6a3,
Col1a1,
Adgre1,
Flt1,
Hif1a,
Itgb1,
Kdr,
Lama5,
Mmp2,
Mmp9,
Pecam1,
S100a4,
Cxcl12,
Tek,
Tgfb1,
Timp1,
Timp2,
Timp3,
Vegfa,
Vegfb,
Vegfc,
Col6a6,
Mapk1,
Mapk3,
Col6a5,
Antxr1
|
| 24563484 |
A mouse model for dominant collagen VI disorders: heterozygous deletion of Col6a3 Exon 16. J Biol Chem Te-Cheng Pan , Rui-Zhu Zhang , Machiko Arita , Sasha Bogdanovich , Sheila M Adams , Sudheer Kumar Gara , Raimund Wagener , Tejvior S Khurana , David E Birk , Mon-Li Chu |
2014-04-11 | - |
| 22159717 |
Mol Cell Proteomics Alexandra Naba , Karl R Clauser , Sebastian Hoersch , Hui Liu , Steven A Carr , Richard O Hynes |
2012-04-01 | - |
| 21477648 |
Differential and restricted expression of novel collagen VI chains in mouse. Matrix Biol. Sudheer Kumar Gara , Paolo Grumati , Stefano Squarzoni , Patrizia Sabatelli , Anna Urciuolo , Paolo Bonaldo , Mats Paulsson , Raimund Wagener |
2011-05-01 |
Col6a1,
Col6a3,
Pecam1,
Col6a6,
Col6a5,
Col6a4
|
| 21267068 |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. Graciana Diez-Roux , Sandro Banfi , Marc Sultan , Lars Geffers , Santosh Anand , David Rozado , Alon Magen , Elena Canidio , Massimiliano Pagani , Ivana Peluso , Nathalie Lin-Marq , Muriel Koch , Marchesa Bilio , Immacolata Cantiello , Roberta Verde , Cristian De Masi , Salvatore A Bianchi , Juliette Cicchini , Elodie Perroud , Shprese Mehmeti , Emilie Dagand , Sabine Schrinner , Asja Nürnberger , Katja Schmidt , Katja Metz , Christina Zwingmann , Norbert Brieske , Cindy Springer , Ana Martinez Hernandez , Sarah Herzog , Frauke Grabbe , Cornelia Sieverding , Barbara Fischer , Kathrin Schrader , Maren Brockmeyer , Sarah Dettmer , Christin Helbig , Violaine Alunni , Marie-Annick Battaini , Carole Mura , Charlotte N Henrichsen , Raquel Garcia-Lopez , Diego Echevarria , Eduardo Puelles , Elena Garcia-Calero , Stefan Kruse , Markus Uhr , Christine Kauck , Guangjie Feng , Nestor Milyaev , Chuang Kee Ong , Lalit Kumar , MeiSze Lam , Colin A Semple , Attila Gyenesei , Stefan Mundlos , Uwe Radelof , Hans Lehrach , Paolo Sarmientos , Alexandre Reymond , Duncan R Davidson , Pascal Dollé , Stylianos E Antonarakis , Marie-Laure Yaspo , Salvador Martinez , Richard A Baldock , Gregor Eichele , Andrea Ballabio |
2011-01-18 | - |
| 18799693 |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. Gwenn M Hansen , Diane C Markesich , Michael B Burnett , Qichao Zhu , Karen M Dionne , Lizabeth J Richter , Richard H Finnell , Arthur T Sands , Brian P Zambrowicz , Alejandro Abuin |
2008-10-01 |
Gm11335,
Gm17762,
A930017K11Rik,
BC028777,
Gm13999,
Gm11696,
Gm12359,
Gm10589,
D030047H15Rik,
Gm10856,
Gm10685,
Gm10062,
Gm10433,
Gm10648,
Gm10840,
Gm15441,
Gm10684,
Gm9900,
Gm10822,
Gm10687,
Gm11744,
Gm10747,
Arih2os,
B230344G16Rik,
Fmr1os,
Tmem51os1,
Gm14488,
Gm13033,
Gm10789,
Gm10615,
Gm1976,
Gm9967,
Gm9917,
Gm1974,
Gm11496,
Gm13580,
Gm2085,
Gm2183,
Gm2245,
Tbx3os1,
Gm12980,
Gm2329,
Lncenc1,
Gm2381,
Snhg12,
Gm2479,
Gm12942,
Gm2529,
Gm2533,
Rpl30-ps7,
Rsf1os2,
Gm2695,
2810416G20Rik,
Rpl30-ps6,
Gm2773,
Gm2788,
Dynlt1f,
Gm9793,
Gm2885,
Gm2920,
Gm15506,
Gm11627,
Gm10518,
Gm13496,
Gm3134,
Gm12827,
Gm3143,
Gm10144,
Ahnak2,
Gm3196,
Gm13242,
Gm3325,
Gm13247,
Gm10863,
Gm13157,
4930522L14Rik,
Gm3552,
Gm15226,
Gm3604,
Gm3643,
BC005561,
Gm3716,
2810410L24Rik,
Gm10282,
Gm3839,
Nhsl2,
4732419C18Rik,
Gm3906,
Gm3973,
Gm4013,
Apol7d,
Gm12057,
Gm10489,
Rex2,
1110002L01Rik,
Gm4189,
Gm4204,
4632428C04Rik,
9130023H24Rik
|
| 18400749 |
Three novel collagen VI chains, alpha4(VI), alpha5(VI), and alpha6(VI). J Biol Chem Jamie Fitzgerald , Cathleen Rich , Fiona H Zhou , Uwe Hansen |
2008-07-18 | - |
| 18276594 |
Three novel collagen VI chains with high homology to the alpha3 chain. J Biol Chem Sudheer Kumar Gara , Paolo Grumati , Anna Urciuolo , Paolo Bonaldo , Birgit Kobbe , Manuel Koch , Mats Paulsson , Raimund Wagener |
2008-04-18 | - |
| 16141073 |
Antisense transcription in the mammalian transcriptome. Science S Katayama , Y Tomaru , T Kasukawa , K Waki , M Nakanishi , M Nakamura , H Nishida , C C Yap , M Suzuki , J Kawai , H Suzuki , P Carninci , Y Hayashizaki , C Wells , M Frith , T Ravasi , K C Pang , J Hallinan , J Mattick , D A Hume , L Lipovich , S Batalov , P G Engström , Y Mizuno , M A Faghihi , A Sandelin , A M Chalk , S Mottagui-Tabar , Z Liang , B Lenhard , C Wahlestedt , RIKEN Genome Exploration Research Group , Genome Science Group (Genome Network Project Core Group) , FANTOM Consortium |
2005-09-02 |
Gm14018,
Gm14964,
F630206G17Rik,
Oog3,
Notumos,
Ldlrap1,
Mdn1,
Pydc3,
9330171B17Rik,
Mfap1b,
Tmsb15b2,
Gm12802,
E430020m11rik,
Gm11335,
Gm15772,
Gm17762,
A930017K11Rik,
LOC100036513,
Gata5os,
Umad1,
Gm16982,
Gm9887,
Gm9872,
LOC100036530,
Gm9934,
Gm9913,
Gm11149,
BC028777,
Gm13999,
LOC100036540,
Gm9744,
Gm9983,
D630002J18Rik,
Gm16525,
Gm11696,
Dnajc3,
9430060I03Rik,
Gm12359,
4921516A02Rik,
Fam129c,
Gm10589,
Rsph3b,
Rnaset2a,
5430403G19Rik,
D030047H15Rik,
Gm13274,
B930046K06Rik,
Gm10862,
Gm10792,
Gm10802,
Gm10532,
G730003C15Rik,
Runx2os1,
Gm15612,
Gm10856,
Gm10857,
Gm10685,
Gm10803,
Gm10723,
F630028O10Rik,
Gm10836,
Gm10405,
Gm10513,
Gm10609,
F630201L12Rik,
4932427H20Rik,
Zfp389,
Gm10763,
Gm10062,
Gm10714,
Gm10531,
Gm10876,
Gm10750,
Gm10433,
Gm10837,
Gm10647,
Gm10648,
Gm10650,
Gm10610,
F830115B05Rik,
Gm10473,
Gm10614,
Gm10286,
G730046D07Rik,
Gm10287,
Gm10785,
Gm10183,
Gm10512,
1700061E17Rik,
Gm44113,
Gm10579,
Gm10741,
Gm10827,
Gm10522,
Gm10536,
Gm15998,
Faddos,
D130050E23Rik,
Gm10735
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
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| 排名 | 研究人员 | 文献 |
|---|---|---|
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